RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
SLC38A1-201ENST00000398637 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
SLC38A1-201ENST00000398637 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
SLC38A1-201ENST00000398637 MLECQ14165 292 aa15.21■□□□□ 0.03
SLC38A1-201ENST00000398637 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.02
SLC38A1-201ENST00000398637 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
SLC38A1-201ENST00000398637 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
SLC38A1-201ENST00000398637 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
SLC38A1-201ENST00000398637 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-201ENST00000398637 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
SLC38A1-201ENST00000398637 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
SLC38A1-201ENST00000398637 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
SLC38A1-201ENST00000398637 G3V3G9 751 aa15.1■□□□□ 0.01
SLC38A1-201ENST00000398637 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
SLC38A1-201ENST00000398637 NAP1L2Q9ULW6 460 aaPredicted RBP15.1■□□□□ 0.01
SLC38A1-201ENST00000398637 SOX12O15370 315 aa15.09■□□□□ 0.01
SLC38A1-201ENST00000398637 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
SLC38A1-201ENST00000398637 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0.011e-6■■■□□ 15
SLC38A1-201ENST00000398637 POGKQ9P215 609 aa15.08■□□□□ 0
SLC38A1-201ENST00000398637 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
SLC38A1-201ENST00000398637 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
SLC38A1-201ENST00000398637 ERCC6Q03468 1493 aa15.06■□□□□ 0
SLC38A1-201ENST00000398637 ZNF330Q9Y3S2 320 aaPredicted RBP15.06■□□□□ 0
SLC38A1-201ENST00000398637 FGD1P98174 961 aa15.03■□□□□ -0
SLC38A1-201ENST00000398637 KLHL34Q8N239 644 aa15.02□□□□□ -0.01
SLC38A1-201ENST00000398637 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
SLC38A1-201ENST00000398637 MEX3CQ5U5Q3 659 aaKnown RBP15.01□□□□□ -0.01
SLC38A1-201ENST00000398637 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
SLC38A1-201ENST00000398637 MSH5O43196 834 aa14.99□□□□□ -0.01
SLC38A1-201ENST00000398637 CSB-PGBD3P0DP91 1061 aa14.99□□□□□ -0.01
SLC38A1-201ENST00000398637 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
SLC38A1-201ENST00000398637 CASC1Q6TDU7 716 aa14.98□□□□□ -0.01
SLC38A1-201ENST00000398637 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
SLC38A1-201ENST00000398637 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
SLC38A1-201ENST00000398637 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
SLC38A1-201ENST00000398637 KCNJ4P48050 445 aa14.94□□□□□ -0.02
SLC38A1-201ENST00000398637 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
SLC38A1-201ENST00000398637 HDGFP51858 240 aaKnown RBP14.93□□□□□ -0.02
SLC38A1-201ENST00000398637 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
SLC38A1-201ENST00000398637 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
SLC38A1-201ENST00000398637 TNNT2P45379 298 aaPredicted RBP14.9□□□□□ -0.02
SLC38A1-201ENST00000398637 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
SLC38A1-201ENST00000398637 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
SLC38A1-201ENST00000398637 FKBP8Q14318 412 aa14.88□□□□□ -0.03
SLC38A1-201ENST00000398637 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
SLC38A1-201ENST00000398637 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
SLC38A1-201ENST00000398637 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
SLC38A1-201ENST00000398637 PDE4CQ08493 712 aa14.84□□□□□ -0.03
SLC38A1-201ENST00000398637 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.03
SLC38A1-201ENST00000398637 NBR1Q14596 966 aa14.83□□□□□ -0.04
SLC38A1-201ENST00000398637 CWC22Q9HCG8 908 aaKnown RBP14.82□□□□□ -0.04
SLC38A1-201ENST00000398637 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
SLC38A1-201ENST00000398637 GNL2Q13823 731 aaKnown RBP14.82□□□□□ -0.04
SLC38A1-201ENST00000398637 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
SLC38A1-201ENST00000398637 PTMAP06454 111 aaKnown RBP14.81□□□□□ -0.04
SLC38A1-201ENST00000398637 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
SLC38A1-201ENST00000398637 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
SLC38A1-201ENST00000398637 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 PLCB2Q00722 1185 aa14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 VPS53Q5VIR6 699 aa14.8□□□□□ -0.04
SLC38A1-201ENST00000398637 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
SLC38A1-201ENST00000398637 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
SLC38A1-201ENST00000398637 MRS2Q9HD23 443 aa14.77□□□□□ -0.05
SLC38A1-201ENST00000398637 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 CHMP3Q9Y3E7 222 aa14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 DNTTIP2Q5QJE6 756 aaKnown RBP14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 ANP32EQ9BTT0 268 aa14.76□□□□□ -0.05
SLC38A1-201ENST00000398637 TAF7LQ5H9L4 462 aa14.75□□□□□ -0.05
SLC38A1-201ENST00000398637 SENP3-EIF4A1A0A087X0R7 540 aa14.75□□□□□ -0.05
SLC38A1-201ENST00000398637 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
SLC38A1-201ENST00000398637 GOLGA6L6A8MZA4 724 aa14.75□□□□□ -0.05
SLC38A1-201ENST00000398637 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
SLC38A1-201ENST00000398637 KIAA2012Q0VF49 1180 aa14.73□□□□□ -0.05
SLC38A1-201ENST00000398637 STK26Q9P289 416 aa14.73□□□□□ -0.05
SLC38A1-201ENST00000398637 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
SLC38A1-201ENST00000398637 EVA1CP58658 441 aa14.72□□□□□ -0.05
SLC38A1-201ENST00000398637 BECN1Q14457 450 aa14.71□□□□□ -0.05
SLC38A1-201ENST00000398637 GORABQ5T7V8 394 aa14.71□□□□□ -0.05
SLC38A1-201ENST00000398637 WWC1Q8IX03 1113 aa14.71□□□□□ -0.05
SLC38A1-201ENST00000398637 CFDP1Q9UEE9 299 aaPredicted RBP14.7□□□□□ -0.06
SLC38A1-201ENST00000398637 NOC3LQ8WTT2 800 aaKnown RBP14.7□□□□□ -0.06
SLC38A1-201ENST00000398637 CTDP1Q9Y5B0 961 aaPredicted RBP14.7□□□□□ -0.06
SLC38A1-201ENST00000398637 GGT6Q6P531 493 aa14.7□□□□□ -0.06
SLC38A1-201ENST00000398637 PPP1R1BQ9UD71 204 aaPredicted RBP14.7□□□□□ -0.06
SLC38A1-201ENST00000398637 PNNQ9H307 717 aaKnown RBP14.69□□□□□ -0.06
SLC38A1-201ENST00000398637 GOLGA6L4A6NEF3 574 aa14.68□□□□□ -0.06
SLC38A1-201ENST00000398637 KANK1Q14678 1352 aa14.68□□□□□ -0.06
SLC38A1-201ENST00000398637 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
SLC38A1-201ENST00000398637 RAD21O60216 631 aa14.66□□□□□ -0.06
SLC38A1-201ENST00000398637 TRIM34Q9BYJ4 488 aa14.66□□□□□ -0.06
SLC38A1-201ENST00000398637 FRAT1Q92837 279 aaPredicted RBP14.66□□□□□ -0.06
SLC38A1-201ENST00000398637 TCEAL9Q9UHQ7 104 aa14.66□□□□□ -0.06
SLC38A1-201ENST00000398637 GLIPR1L2Q4G1C9 344 aa14.65□□□□□ -0.06
SLC38A1-201ENST00000398637 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
SLC38A1-201ENST00000398637 EID1Q9Y6B2 187 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms