RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 GSE1Q14687 1217 aa15.44■□□□□ 0.06
PDZD2-201ENST00000397559 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
PDZD2-201ENST00000397559 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
PDZD2-201ENST00000397559 PHF12Q96QT6 1004 aa15.41■□□□□ 0.06
PDZD2-201ENST00000397559 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
PDZD2-201ENST00000397559 PYGBP11216 843 aa15.33■□□□□ 0.04
PDZD2-201ENST00000397559 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
PDZD2-201ENST00000397559 GABBR2O75899 941 aa15.27■□□□□ 0.04
PDZD2-201ENST00000397559 MAP3K13O43283 966 aa15.26■□□□□ 0.03
PDZD2-201ENST00000397559 PKD2Q13563 968 aa15.24■□□□□ 0.03
PDZD2-201ENST00000397559 CLCN6P51797 869 aa15.22■□□□□ 0.03
PDZD2-201ENST00000397559 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
PDZD2-201ENST00000397559 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
PDZD2-201ENST00000397559 PCDHB13Q9Y5F0 798 aa15.22■□□□□ 0.03
PDZD2-201ENST00000397559 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
PDZD2-201ENST00000397559 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
PDZD2-201ENST00000397559 CHRM1P11229 460 aaPredicted RBP15.2■□□□□ 0.02
PDZD2-201ENST00000397559 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
PDZD2-201ENST00000397559 SGIP1Q9BQI5 828 aa15.15■□□□□ 0.02
PDZD2-201ENST00000397559 IFNL1Q8IU54 200 aa15.14■□□□□ 0.01
PDZD2-201ENST00000397559 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
PDZD2-201ENST00000397559 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
PDZD2-201ENST00000397559 ZNF467Q7Z7K2 595 aaPredicted RBP15.09■□□□□ 0.01
PDZD2-201ENST00000397559 TRPC6Q9Y210 931 aa15.07■□□□□ 0
PDZD2-201ENST00000397559 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
PDZD2-201ENST00000397559 RGL2O15211 777 aa15.04■□□□□ -0
PDZD2-201ENST00000397559 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
PDZD2-201ENST00000397559 RIOK3O14730 519 aaKnown RBP15.02■□□□□ -0
PDZD2-201ENST00000397559 TIE1P35590 1138 aa14.97□□□□□ -0.01
PDZD2-201ENST00000397559 PDAP1Q13442 181 aaKnown RBP14.96□□□□□ -0.01
PDZD2-201ENST00000397559 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
PDZD2-201ENST00000397559 PSEN1P49768 467 aa14.95□□□□□ -0.02
PDZD2-201ENST00000397559 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
PDZD2-201ENST00000397559 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
PDZD2-201ENST00000397559 VGFO15240 615 aaPredicted RBP14.93□□□□□ -0.02
PDZD2-201ENST00000397559 TTLL13PA6NNM8 815 aa14.92□□□□□ -0.02
PDZD2-201ENST00000397559 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
PDZD2-201ENST00000397559 ATN1P54259 1190 aaPredicted RBP14.9□□□□□ -0.02
PDZD2-201ENST00000397559 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
PDZD2-201ENST00000397559 TAOK2Q9UL54 1235 aa14.9□□□□□ -0.02
PDZD2-201ENST00000397559 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
PDZD2-201ENST00000397559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
PDZD2-201ENST00000397559 ZFP91Q96JP5 570 aaPredicted RBP14.88□□□□□ -0.03
PDZD2-201ENST00000397559 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
PDZD2-201ENST00000397559 TRIM35Q9UPQ4 493 aa14.84□□□□□ -0.03
PDZD2-201ENST00000397559 STK25O00506 426 aa14.8□□□□□ -0.04
PDZD2-201ENST00000397559 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
PDZD2-201ENST00000397559 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
PDZD2-201ENST00000397559 CABP2Q9NPB3 220 aa14.79□□□□□ -0.04
PDZD2-201ENST00000397559 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
PDZD2-201ENST00000397559 CHGAP10645 457 aaKnown RBP14.75□□□□□ -0.05
PDZD2-201ENST00000397559 SLC39A7Q92504 469 aa14.73□□□□□ -0.05
PDZD2-201ENST00000397559 MKRN3Q13064 507 aaKnown RBP14.71□□□□□ -0.05
PDZD2-201ENST00000397559 HS6ST3Q8IZP7 471 aa14.7□□□□□ -0.06
PDZD2-201ENST00000397559 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
PDZD2-201ENST00000397559 C7P10643 843 aa14.69□□□□□ -0.06
PDZD2-201ENST00000397559 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
PDZD2-201ENST00000397559 IER5LQ5T953 404 aa14.68□□□□□ -0.06
PDZD2-201ENST00000397559 SEC24BO95487 1268 aa14.64□□□□□ -0.07
PDZD2-201ENST00000397559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
PDZD2-201ENST00000397559 COLQQ9Y215 455 aaPredicted RBP14.61□□□□□ -0.07
PDZD2-201ENST00000397559 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
PDZD2-201ENST00000397559 PLCG2P16885 1265 aa14.59□□□□□ -0.07
PDZD2-201ENST00000397559 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
PDZD2-201ENST00000397559 SOX12O15370 315 aa14.57□□□□□ -0.08
PDZD2-201ENST00000397559 OCEL1Q9H607 264 aa14.57□□□□□ -0.08
PDZD2-201ENST00000397559 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
PDZD2-201ENST00000397559 MFRPQ9BY79 579 aa14.52□□□□□ -0.09
PDZD2-201ENST00000397559 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
PDZD2-201ENST00000397559 NLRP6P59044 892 aa14.5□□□□□ -0.09
PDZD2-201ENST00000397559 NKX1-1Q15270 411 aaPredicted RBP14.5□□□□□ -0.09
PDZD2-201ENST00000397559 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
PDZD2-201ENST00000397559 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
PDZD2-201ENST00000397559 POTEB2H3BUK9 544 aa14.48□□□□□ -0.09
PDZD2-201ENST00000397559 DPY19L2Q6NUT2 758 aa14.47□□□□□ -0.09
PDZD2-201ENST00000397559 FBXO22Q8NEZ5 403 aa14.46□□□□□ -0.09
PDZD2-201ENST00000397559 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
PDZD2-201ENST00000397559 LHX8Q68G74 356 aa14.45□□□□□ -0.1
PDZD2-201ENST00000397559 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
PDZD2-201ENST00000397559 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
PDZD2-201ENST00000397559 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
PDZD2-201ENST00000397559 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
PDZD2-201ENST00000397559 L3MBTL3Q96JM7 780 aaPredicted RBP14.37□□□□□ -0.11
PDZD2-201ENST00000397559 G3V3G9 751 aa14.36□□□□□ -0.11
PDZD2-201ENST00000397559 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
PDZD2-201ENST00000397559 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
PDZD2-201ENST00000397559 BOLA1Q9Y3E2 137 aa14.34□□□□□ -0.11
PDZD2-201ENST00000397559 PPP1R37O75864 691 aa14.33□□□□□ -0.12
PDZD2-201ENST00000397559 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
PDZD2-201ENST00000397559 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
PDZD2-201ENST00000397559 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
PDZD2-201ENST00000397559 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
PDZD2-201ENST00000397559 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
PDZD2-201ENST00000397559 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
PDZD2-201ENST00000397559 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
PDZD2-201ENST00000397559 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
PDZD2-201ENST00000397559 OTUD5Q96G74 571 aa14.26□□□□□ -0.13
PDZD2-201ENST00000397559 TMEM121BQ9BXQ6 578 aaPredicted RBP14.25□□□□□ -0.13
PDZD2-201ENST00000397559 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
PDZD2-201ENST00000397559 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms