RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
XIRP1-202ENST00000396251 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
XIRP1-202ENST00000396251 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
XIRP1-202ENST00000396251 KANK1Q14678 1352 aa16.35■□□□□ 0.21
XIRP1-202ENST00000396251 NPHP1O15259 732 aa16.34■□□□□ 0.21
XIRP1-202ENST00000396251 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
XIRP1-202ENST00000396251 EEA1Q15075 1411 aa16.34■□□□□ 0.21
XIRP1-202ENST00000396251 POGKQ9P215 609 aa16.33■□□□□ 0.21
XIRP1-202ENST00000396251 ARXQ96QS3 562 aa16.31■□□□□ 0.2
XIRP1-202ENST00000396251 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
XIRP1-202ENST00000396251 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
XIRP1-202ENST00000396251 CLIP1P30622 1438 aa16.29■□□□□ 0.2
XIRP1-202ENST00000396251 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
XIRP1-202ENST00000396251 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
XIRP1-202ENST00000396251 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
XIRP1-202ENST00000396251 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
XIRP1-202ENST00000396251 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
XIRP1-202ENST00000396251 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
XIRP1-202ENST00000396251 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
XIRP1-202ENST00000396251 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
XIRP1-202ENST00000396251 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
XIRP1-202ENST00000396251 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
XIRP1-202ENST00000396251 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
XIRP1-202ENST00000396251 GGT6Q6P531 493 aa16.19■□□□□ 0.18
XIRP1-202ENST00000396251 CUX2O14529 1486 aa16.18■□□□□ 0.18
XIRP1-202ENST00000396251 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
XIRP1-202ENST00000396251 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
XIRP1-202ENST00000396251 EFCAB2Q5VUJ9 269 aa16.17■□□□□ 0.18
XIRP1-202ENST00000396251 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
XIRP1-202ENST00000396251 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
XIRP1-202ENST00000396251 SOGA1O94964 1423 aa16.15■□□□□ 0.18
XIRP1-202ENST00000396251 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
XIRP1-202ENST00000396251 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
XIRP1-202ENST00000396251 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
XIRP1-202ENST00000396251 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
XIRP1-202ENST00000396251 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
XIRP1-202ENST00000396251 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.17
XIRP1-202ENST00000396251 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
XIRP1-202ENST00000396251 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
XIRP1-202ENST00000396251 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
XIRP1-202ENST00000396251 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
XIRP1-202ENST00000396251 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
XIRP1-202ENST00000396251 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
XIRP1-202ENST00000396251 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
XIRP1-202ENST00000396251 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.15
XIRP1-202ENST00000396251 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
XIRP1-202ENST00000396251 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
XIRP1-202ENST00000396251 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
XIRP1-202ENST00000396251 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
XIRP1-202ENST00000396251 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
XIRP1-202ENST00000396251 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
XIRP1-202ENST00000396251 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
XIRP1-202ENST00000396251 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
XIRP1-202ENST00000396251 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
XIRP1-202ENST00000396251 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
XIRP1-202ENST00000396251 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
XIRP1-202ENST00000396251 JPH4Q96JJ6 628 aa15.96■□□□□ 0.15
XIRP1-202ENST00000396251 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
XIRP1-202ENST00000396251 CDK11BP21127 795 aaKnown RBP15.93■□□□□ 0.14
XIRP1-202ENST00000396251 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
XIRP1-202ENST00000396251 FAM69CQ0P6D2 419 aa15.92■□□□□ 0.14
XIRP1-202ENST00000396251 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
XIRP1-202ENST00000396251 SOX12O15370 315 aa15.92■□□□□ 0.14
XIRP1-202ENST00000396251 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
XIRP1-202ENST00000396251 HDGFL2Q7Z4V5 671 aaPredicted RBP15.91■□□□□ 0.14
XIRP1-202ENST00000396251 KIF3BO15066 747 aa15.91■□□□□ 0.14
XIRP1-202ENST00000396251 STK26Q9P289 416 aa15.9■□□□□ 0.14
XIRP1-202ENST00000396251 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
XIRP1-202ENST00000396251 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
XIRP1-202ENST00000396251 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
XIRP1-202ENST00000396251 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
XIRP1-202ENST00000396251 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
XIRP1-202ENST00000396251 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
XIRP1-202ENST00000396251 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
XIRP1-202ENST00000396251 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
XIRP1-202ENST00000396251 PTPRGP23470 1445 aa15.86■□□□□ 0.13
XIRP1-202ENST00000396251 FOXD1Q16676 465 aa15.85■□□□□ 0.13
XIRP1-202ENST00000396251 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
XIRP1-202ENST00000396251 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
XIRP1-202ENST00000396251 TMF1P82094 1093 aa15.83■□□□□ 0.13
XIRP1-202ENST00000396251 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
XIRP1-202ENST00000396251 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
XIRP1-202ENST00000396251 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
XIRP1-202ENST00000396251 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
XIRP1-202ENST00000396251 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
XIRP1-202ENST00000396251 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
XIRP1-202ENST00000396251 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
XIRP1-202ENST00000396251 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
XIRP1-202ENST00000396251 CHMP4BQ9H444 224 aaKnown RBP15.78■□□□□ 0.12
XIRP1-202ENST00000396251 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
XIRP1-202ENST00000396251 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.12
XIRP1-202ENST00000396251 FKBP8Q14318 412 aa15.77■□□□□ 0.11
XIRP1-202ENST00000396251 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.11
XIRP1-202ENST00000396251 ANP32BQ92688 251 aaKnown RBP15.76■□□□□ 0.11
XIRP1-202ENST00000396251 EVA1CP58658 441 aa15.75■□□□□ 0.11
XIRP1-202ENST00000396251 G3V3G9 751 aa15.75■□□□□ 0.11
XIRP1-202ENST00000396251 DCAF8Q5TAQ9 597 aa15.75■□□□□ 0.11
XIRP1-202ENST00000396251 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
XIRP1-202ENST00000396251 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
XIRP1-202ENST00000396251 EIF5BO60841 1220 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms