RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
SGMS2-202ENST00000394684 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
SGMS2-202ENST00000394684 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
SGMS2-202ENST00000394684 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
SGMS2-202ENST00000394684 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
SGMS2-202ENST00000394684 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
SGMS2-202ENST00000394684 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
SGMS2-202ENST00000394684 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
SGMS2-202ENST00000394684 MRS2Q9HD23 443 aa11.56□□□□□ -0.56
SGMS2-202ENST00000394684 TRIM44Q96DX7 344 aaPredicted RBP11.56□□□□□ -0.56
SGMS2-202ENST00000394684 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
SGMS2-202ENST00000394684 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
SGMS2-202ENST00000394684 PTMAP06454 111 aaKnown RBP11.54□□□□□ -0.56
SGMS2-202ENST00000394684 CLSTN1O94985 981 aa11.54□□□□□ -0.56
SGMS2-202ENST00000394684 BECN1Q14457 450 aa11.52□□□□□ -0.56
SGMS2-202ENST00000394684 KCNH8Q96L42 1107 aa11.52□□□□□ -0.56
SGMS2-202ENST00000394684 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.57
SGMS2-202ENST00000394684 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
SGMS2-202ENST00000394684 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
SGMS2-202ENST00000394684 CHMP7Q8WUX9 453 aaPredicted RBP11.5□□□□□ -0.57
SGMS2-202ENST00000394684 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
SGMS2-202ENST00000394684 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
SGMS2-202ENST00000394684 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
SGMS2-202ENST00000394684 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
SGMS2-202ENST00000394684 FGD1P98174 961 aa11.48□□□□□ -0.57
SGMS2-202ENST00000394684 NAP1L2Q9ULW6 460 aaPredicted RBP11.47□□□□□ -0.57
SGMS2-202ENST00000394684 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
SGMS2-202ENST00000394684 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
SGMS2-202ENST00000394684 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
SGMS2-202ENST00000394684 OS9Q13438 667 aaPredicted RBP11.46□□□□□ -0.58
SGMS2-202ENST00000394684 RGL3Q3MIN7 710 aa11.46□□□□□ -0.58
SGMS2-202ENST00000394684 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
SGMS2-202ENST00000394684 ANP32EQ9BTT0 268 aa11.45□□□□□ -0.58
SGMS2-202ENST00000394684 DDRGK1Q96HY6 314 aa11.44□□□□□ -0.58
SGMS2-202ENST00000394684 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
SGMS2-202ENST00000394684 KCNJ4P48050 445 aa11.42□□□□□ -0.58
SGMS2-202ENST00000394684 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
SGMS2-202ENST00000394684 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
SGMS2-202ENST00000394684 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
SGMS2-202ENST00000394684 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
SGMS2-202ENST00000394684 GOLGA6L6A8MZA4 724 aa11.41□□□□□ -0.58
SGMS2-202ENST00000394684 SCRIBQ14160 1630 aa11.4□□□□□ -0.58
SGMS2-202ENST00000394684 POGKQ9P215 609 aa11.4□□□□□ -0.58
SGMS2-202ENST00000394684 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
SGMS2-202ENST00000394684 EIF4G2P78344 907 aaKnown RBP eCLIP11.39□□□□□ -0.59
SGMS2-202ENST00000394684 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
SGMS2-202ENST00000394684 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
SGMS2-202ENST00000394684 PRM3Q9NNZ6 103 aa11.38□□□□□ -0.59
SGMS2-202ENST00000394684 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
SGMS2-202ENST00000394684 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
SGMS2-202ENST00000394684 NRDCO43847 1150 aa11.36□□□□□ -0.59
SGMS2-202ENST00000394684 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
SGMS2-202ENST00000394684 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
SGMS2-202ENST00000394684 SOX12O15370 315 aa11.34□□□□□ -0.59
SGMS2-202ENST00000394684 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
SGMS2-202ENST00000394684 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
SGMS2-202ENST00000394684 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
SGMS2-202ENST00000394684 TMX4Q9H1E5 349 aaPredicted RBP11.3□□□□□ -0.6
SGMS2-202ENST00000394684 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
SGMS2-202ENST00000394684 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
SGMS2-202ENST00000394684 RGS3P49796 1198 aa11.29□□□□□ -0.6
SGMS2-202ENST00000394684 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
SGMS2-202ENST00000394684 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
SGMS2-202ENST00000394684 MLECQ14165 292 aa11.28□□□□□ -0.6
SGMS2-202ENST00000394684 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
SGMS2-202ENST00000394684 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.6
SGMS2-202ENST00000394684 CARD11Q9BXL7 1154 aa11.27□□□□□ -0.6
SGMS2-202ENST00000394684 L1TD1Q5T7N2 865 aaKnown RBP11.27□□□□□ -0.61
SGMS2-202ENST00000394684 KIAA2012Q0VF49 1180 aa11.26□□□□□ -0.61
SGMS2-202ENST00000394684 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
SGMS2-202ENST00000394684 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
SGMS2-202ENST00000394684 CHAF1AQ13111 956 aaPredicted RBP11.24□□□□□ -0.61
SGMS2-202ENST00000394684 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
SGMS2-202ENST00000394684 NOC3LQ8WTT2 800 aaKnown RBP11.24□□□□□ -0.61
SGMS2-202ENST00000394684 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
SGMS2-202ENST00000394684 MS4A1P11836 297 aa11.23□□□□□ -0.61
SGMS2-202ENST00000394684 PDE4CQ08493 712 aa11.23□□□□□ -0.61
SGMS2-202ENST00000394684 HDGFP51858 240 aaKnown RBP11.23□□□□□ -0.61
SGMS2-202ENST00000394684 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
SGMS2-202ENST00000394684 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
SGMS2-202ENST00000394684 MCCP23508 829 aa11.22□□□□□ -0.61
SGMS2-202ENST00000394684 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
SGMS2-202ENST00000394684 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
SGMS2-202ENST00000394684 NACADO15069 1562 aa11.21□□□□□ -0.61
SGMS2-202ENST00000394684 G3V3G9 751 aa11.21□□□□□ -0.61
SGMS2-202ENST00000394684 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
SGMS2-202ENST00000394684 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.62
SGMS2-202ENST00000394684 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
SGMS2-202ENST00000394684 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
SGMS2-202ENST00000394684 MIER1Q8N108 512 aa11.19□□□□□ -0.62
SGMS2-202ENST00000394684 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
SGMS2-202ENST00000394684 HSCBQ8IWL3 235 aa11.18□□□□□ -0.62
SGMS2-202ENST00000394684 APBB1O00213 710 aa11.18□□□□□ -0.62
SGMS2-202ENST00000394684 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
SGMS2-202ENST00000394684 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
SGMS2-202ENST00000394684 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
SGMS2-202ENST00000394684 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
SGMS2-202ENST00000394684 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
SGMS2-202ENST00000394684 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
SGMS2-202ENST00000394684 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms