RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
GAPVD1-206ENST00000394104 BECN1Q14457 450 aa7.52□□□□□ -1.2
GAPVD1-206ENST00000394104 AMER1Q5JTC6 1135 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-206ENST00000394104 NCBP3Q53F19 620 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-206ENST00000394104 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
GAPVD1-206ENST00000394104 NAP1L5Q96NT1 182 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-206ENST00000394104 GOLGA6L22H0YM25 854 aa7.51□□□□□ -1.21
GAPVD1-206ENST00000394104 RTN4Q9NQC3 1192 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-206ENST00000394104 MRS2Q9HD23 443 aa7.5□□□□□ -1.21
GAPVD1-206ENST00000394104 CHIC2Q9UKJ5 165 aa7.49□□□□□ -1.21
GAPVD1-206ENST00000394104 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
GAPVD1-206ENST00000394104 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
GAPVD1-206ENST00000394104 HIRIP3Q9BW71 556 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-206ENST00000394104 CASC1Q6TDU7 716 aa7.47□□□□□ -1.21
GAPVD1-206ENST00000394104 ANP32EQ9BTT0 268 aa7.45□□□□□ -1.22
GAPVD1-206ENST00000394104 NPM1P06748 294 aaKnown RBP eCLIP7.45□□□□□ -1.22
GAPVD1-206ENST00000394104 CLSTN1O94985 981 aa7.44□□□□□ -1.22
GAPVD1-206ENST00000394104 HAP1P54257 671 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-206ENST00000394104 LAS1LQ9Y4W2 734 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-206ENST00000394104 NAP1L2Q9ULW6 460 aaPredicted RBP7.43□□□□□ -1.22
GAPVD1-206ENST00000394104 GOLGA6L6A8MZA4 724 aa7.43□□□□□ -1.22
GAPVD1-206ENST00000394104 NPHP1O15259 732 aa7.42□□□□□ -1.22
GAPVD1-206ENST00000394104 PPM1GO15355 546 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-206ENST00000394104 FTSJ3Q8IY81 847 aaKnown RBP7.42□□□□□ -1.22
GAPVD1-206ENST00000394104 HSP90AB1P08238 724 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-206ENST00000394104 PPP1R15AO75807 674 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-206ENST00000394104 MIER1Q8N108 512 aa7.4□□□□□ -1.22
GAPVD1-206ENST00000394104 CSRNP3Q8WYN3 585 aa7.39□□□□□ -1.23
GAPVD1-206ENST00000394104 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-206ENST00000394104 FGD1P98174 961 aa7.38□□□□□ -1.23
GAPVD1-206ENST00000394104 ERICH6BQ5W0A0 696 aa7.38□□□□□ -1.23
GAPVD1-206ENST00000394104 OS9Q13438 667 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-206ENST00000394104 NEUROD2Q15784 382 aa7.38□□□□□ -1.23
GAPVD1-206ENST00000394104 DRC7Q8IY82 874 aa7.38□□□□□ -1.23
GAPVD1-206ENST00000394104 RGS3P49796 1198 aa7.37□□□□□ -1.23
GAPVD1-206ENST00000394104 SPRYD3Q8NCJ5 442 aa7.37□□□□□ -1.23
GAPVD1-206ENST00000394104 KCNJ4P48050 445 aa7.36□□□□□ -1.23
GAPVD1-206ENST00000394104 ARID3AQ99856 593 aa7.36□□□□□ -1.23
GAPVD1-206ENST00000394104 GOLGA2Q08379 1002 aa7.36□□□□□ -1.23
GAPVD1-206ENST00000394104 CHAF1AQ13111 956 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-206ENST00000394104 SUPT16HQ9Y5B9 1047 aaKnown RBP7.36□□□□□ -1.23
GAPVD1-206ENST00000394104 CFAP53Q96M91 514 aa7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 FRAT1Q92837 279 aaPredicted RBP7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 TSPY4P0CV99 314 aa7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 TSPY10P0CW01 314 aa7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 LMOD2Q6P5Q4 547 aa7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 ISY1Q9ULR0 285 aaKnown RBP7.35□□□□□ -1.23
GAPVD1-206ENST00000394104 RGL3Q3MIN7 710 aa7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 EIF4G2P78344 907 aaKnown RBP eCLIP7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 MSNP26038 577 aaKnown RBP7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 NRDCO43847 1150 aa7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 RRP7BPQ9NSQ0 103 aa7.34□□□□□ -1.23
GAPVD1-206ENST00000394104 GOLGA6L4A6NEF3 574 aa7.34□□□□□ -1.24
GAPVD1-206ENST00000394104 NOP58Q9Y2X3 529 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-206ENST00000394104 MAPK8IP3Q9UPT6 1336 aa7.33□□□□□ -1.24
GAPVD1-206ENST00000394104 NOC3LQ8WTT2 800 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-206ENST00000394104 KNSTRNQ9Y448 316 aa7.32□□□□□ -1.24
GAPVD1-206ENST00000394104 PDE4CQ08493 712 aa7.31□□□□□ -1.24
GAPVD1-206ENST00000394104 HSCBQ8IWL3 235 aa7.31□□□□□ -1.24
GAPVD1-206ENST00000394104 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
GAPVD1-206ENST00000394104 PNNQ9H307 717 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-206ENST00000394104 KIAA2012Q0VF49 1180 aa7.3□□□□□ -1.24
GAPVD1-206ENST00000394104 GNL2Q13823 731 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-206ENST00000394104 CC2D1BQ5T0F9 858 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-206ENST00000394104 MTUS2Q5JR59 1369 aa7.29□□□□□ -1.24
GAPVD1-206ENST00000394104 CCDC180Q9P1Z9 1646 aa7.29□□□□□ -1.24
GAPVD1-206ENST00000394104 U2SURPO15042 1029 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-206ENST00000394104 L1TD1Q5T7N2 865 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-206ENST00000394104 ANO8Q9HCE9 1232 aaPredicted RBP7.27□□□□□ -1.24
GAPVD1-206ENST00000394104 MCCP23508 829 aa7.27□□□□□ -1.25
GAPVD1-206ENST00000394104 DEKP35659 375 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-206ENST00000394104 NUDCQ9Y266 331 aa7.27□□□□□ -1.25
GAPVD1-206ENST00000394104 SOX12O15370 315 aa7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 B4GALNT3Q6L9W6 998 aa7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 POGKQ9P215 609 aa7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 PPP4R2Q9NY27 417 aa7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 TNNT3P45378 269 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 CARD11Q9BXL7 1154 aa7.26□□□□□ -1.25
GAPVD1-206ENST00000394104 APBB1O00213 710 aa7.25□□□□□ -1.25
GAPVD1-206ENST00000394104 RB1CC1Q8TDY2 1594 aa7.25□□□□□ -1.25
GAPVD1-206ENST00000394104 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
GAPVD1-206ENST00000394104 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-206ENST00000394104 CHMP7Q8WUX9 453 aaPredicted RBP7.24□□□□□ -1.25
GAPVD1-206ENST00000394104 CHMP4BQ9H444 224 aaKnown RBP7.24□□□□□ -1.25
GAPVD1-206ENST00000394104 HSP90B1P14625 803 aaKnown RBP7.23□□□□□ -1.25
GAPVD1-206ENST00000394104 SCRIBQ14160 1630 aa7.23□□□□□ -1.25
GAPVD1-206ENST00000394104 CREBRFQ8IUR6 639 aa7.23□□□□□ -1.25
GAPVD1-206ENST00000394104 DCAF1Q9Y4B6 1507 aa7.22□□□□□ -1.25
GAPVD1-206ENST00000394104 MS4A1P11836 297 aa7.22□□□□□ -1.25
GAPVD1-206ENST00000394104 FBXO3Q9UK99 471 aa7.21□□□□□ -1.25
GAPVD1-206ENST00000394104 GOLGA6L1Q8N7Z2 621 aa7.21□□□□□ -1.25
GAPVD1-206ENST00000394104 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
GAPVD1-206ENST00000394104 ZNF330Q9Y3S2 320 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-206ENST00000394104 TPM4P67936 248 aa7.2□□□□□ -1.26
GAPVD1-206ENST00000394104 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-206ENST00000394104 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-206ENST00000394104 GBP4Q96PP9 640 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms