RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
DDX60-201ENST00000393743 HNRNPUQ00839 825 aaKnown RBP eCLIP9.54□□□□□ -0.88
DDX60-201ENST00000393743 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
DDX60-201ENST00000393743 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
DDX60-201ENST00000393743 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
DDX60-201ENST00000393743 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
DDX60-201ENST00000393743 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.88
DDX60-201ENST00000393743 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.88
DDX60-201ENST00000393743 KCNH8Q96L42 1107 aa9.52□□□□□ -0.89
DDX60-201ENST00000393743 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
DDX60-201ENST00000393743 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
DDX60-201ENST00000393743 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
DDX60-201ENST00000393743 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
DDX60-201ENST00000393743 CHMP4BQ9H444 224 aaKnown RBP9.5□□□□□ -0.89
DDX60-201ENST00000393743 MRS2Q9HD23 443 aa9.5□□□□□ -0.89
DDX60-201ENST00000393743 DDX10Q13206 875 aaKnown RBP9.49□□□□□ -0.89
DDX60-201ENST00000393743 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
DDX60-201ENST00000393743 CEP164Q9UPV0 1460 aa9.48□□□□□ -0.89
DDX60-201ENST00000393743 PNNQ9H307 717 aaKnown RBP9.48□□□□□ -0.89
DDX60-201ENST00000393743 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
DDX60-201ENST00000393743 KANK1Q14678 1352 aa9.48□□□□□ -0.89
DDX60-201ENST00000393743 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
DDX60-201ENST00000393743 ANP32EQ9BTT0 268 aa9.47□□□□□ -0.89
DDX60-201ENST00000393743 A0A0G2JS52 829 aa9.46□□□□□ -0.9
DDX60-201ENST00000393743 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
DDX60-201ENST00000393743 MS4A1P11836 297 aa9.44□□□□□ -0.9
DDX60-201ENST00000393743 RRP7BPQ9NSQ0 103 aa9.44□□□□□ -0.9
DDX60-201ENST00000393743 FKBP8Q14318 412 aa9.44□□□□□ -0.9
DDX60-201ENST00000393743 TNIKQ9UKE5 1360 aa9.43□□□□□ -0.9
DDX60-201ENST00000393743 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
DDX60-201ENST00000393743 CASC1Q6TDU7 716 aa9.43□□□□□ -0.9
DDX60-201ENST00000393743 POGKQ9P215 609 aa9.43□□□□□ -0.9
DDX60-201ENST00000393743 BECN1Q14457 450 aa9.42□□□□□ -0.9
DDX60-201ENST00000393743 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
DDX60-201ENST00000393743 MAPK8IP3Q9UPT6 1336 aa9.42□□□□□ -0.9
DDX60-201ENST00000393743 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
DDX60-201ENST00000393743 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
DDX60-201ENST00000393743 CARMIL2Q6F5E8 1435 aa9.4□□□□□ -0.9
DDX60-201ENST00000393743 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
DDX60-201ENST00000393743 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
DDX60-201ENST00000393743 TIMELESSQ9UNS1 1208 aa9.4□□□□□ -0.9
DDX60-201ENST00000393743 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
DDX60-201ENST00000393743 SALL2Q9Y467 1007 aaPredicted RBP9.39□□□□□ -0.91
DDX60-201ENST00000393743 CARD11Q9BXL7 1154 aa9.39□□□□□ -0.91
DDX60-201ENST00000393743 CHMP4AQ9BY43 222 aa9.39□□□□□ -0.91
DDX60-201ENST00000393743 RGL3Q3MIN7 710 aa9.37□□□□□ -0.91
DDX60-201ENST00000393743 ZRSR1Q15695 479 aaKnown RBP9.36□□□□□ -0.91
DDX60-201ENST00000393743 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
DDX60-201ENST00000393743 CARMIL1Q5VZK9 1371 aa9.35□□□□□ -0.91
DDX60-201ENST00000393743 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.91
DDX60-201ENST00000393743 TMF1P82094 1093 aa9.34□□□□□ -0.91
DDX60-201ENST00000393743 NPHP1O15259 732 aa9.33□□□□□ -0.92
DDX60-201ENST00000393743 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
DDX60-201ENST00000393743 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
DDX60-201ENST00000393743 CECR2Q9BXF3 1484 aa9.32□□□□□ -0.92
DDX60-201ENST00000393743 GLIPR1L2Q4G1C9 344 aa9.31□□□□□ -0.92
DDX60-201ENST00000393743 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
DDX60-201ENST00000393743 ARXQ96QS3 562 aa9.31□□□□□ -0.92
DDX60-201ENST00000393743 PPM1GO15355 546 aaPredicted RBP9.31□□□□□ -0.92
DDX60-201ENST00000393743 RSPH4AQ5TD94 716 aa9.31□□□□□ -0.92
DDX60-201ENST00000393743 EFCAB2Q5VUJ9 269 aa9.31□□□□□ -0.92
DDX60-201ENST00000393743 CUX2O14529 1486 aa9.3□□□□□ -0.92
DDX60-201ENST00000393743 CALD1Q05682 793 aaKnown RBP9.29□□□□□ -0.92
DDX60-201ENST00000393743 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
DDX60-201ENST00000393743 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
DDX60-201ENST00000393743 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
DDX60-201ENST00000393743 FMN1Q68DA7 1419 aa9.28□□□□□ -0.92
DDX60-201ENST00000393743 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
DDX60-201ENST00000393743 HDAC5Q9UQL6 1122 aa9.27□□□□□ -0.92
DDX60-201ENST00000393743 EIF4G1Q04637 1599 aaKnown RBP9.27□□□□□ -0.93
DDX60-201ENST00000393743 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
DDX60-201ENST00000393743 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
DDX60-201ENST00000393743 NRDCO43847 1150 aa9.25□□□□□ -0.93
DDX60-201ENST00000393743 GOLGA6L6A8MZA4 724 aa9.25□□□□□ -0.93
DDX60-201ENST00000393743 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
DDX60-201ENST00000393743 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
DDX60-201ENST00000393743 TRIM44Q96DX7 344 aaPredicted RBP9.24□□□□□ -0.93
DDX60-201ENST00000393743 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
DDX60-201ENST00000393743 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
DDX60-201ENST00000393743 ANKRD30AQ9BXX3 1397 aa9.23□□□□□ -0.93
DDX60-201ENST00000393743 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
DDX60-201ENST00000393743 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
DDX60-201ENST00000393743 FGD1P98174 961 aa9.23□□□□□ -0.93
DDX60-201ENST00000393743 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
DDX60-201ENST00000393743 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
DDX60-201ENST00000393743 SOGA1O94964 1423 aa9.22□□□□□ -0.93
DDX60-201ENST00000393743 MCCP23508 829 aa9.22□□□□□ -0.93
DDX60-201ENST00000393743 TMX4Q9H1E5 349 aaPredicted RBP9.22□□□□□ -0.93
DDX60-201ENST00000393743 IPO8O15397 1037 aaKnown RBP9.22□□□□□ -0.93
DDX60-201ENST00000393743 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
DDX60-201ENST00000393743 KCNJ4P48050 445 aa9.21□□□□□ -0.94
DDX60-201ENST00000393743 GGT6Q6P531 493 aa9.2□□□□□ -0.94
DDX60-201ENST00000393743 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
DDX60-201ENST00000393743 MLECQ14165 292 aa9.2□□□□□ -0.94
DDX60-201ENST00000393743 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
DDX60-201ENST00000393743 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
DDX60-201ENST00000393743 ABCC8Q09428 1581 aa9.19□□□□□ -0.94
DDX60-201ENST00000393743 MIER1Q8N108 512 aa9.18□□□□□ -0.94
DDX60-201ENST00000393743 L1TD1Q5T7N2 865 aaKnown RBP9.18□□□□□ -0.94
DDX60-201ENST00000393743 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms