RNA–Protein interactions for RNA: ENST00000393128.8

MRPL42-202, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene MRPL42, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-202ENST00000393128 ATXN8OSP0DMR3 200 aa8.18□□□□□ -1.1
MRPL42-202ENST00000393128 ASTLQ6HA08 431 aaPredicted RBP8.17□□□□□ -1.1
MRPL42-202ENST00000393128 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
MRPL42-202ENST00000393128 PAK3O75914 559 aaPredicted RBP8.1□□□□□ -1.11
MRPL42-202ENST00000393128 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
MRPL42-202ENST00000393128 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
MRPL42-202ENST00000393128 PHF12Q96QT6 1004 aa8.03□□□□□ -1.12
MRPL42-202ENST00000393128 ST18O60284 1047 aa8□□□□□ -1.13
MRPL42-202ENST00000393128 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
MRPL42-202ENST00000393128 MS4A3Q96HJ5 214 aa7.92□□□□□ -1.14
MRPL42-202ENST00000393128 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
MRPL42-202ENST00000393128 POTEFA5A3E0 1075 aa7.9□□□□□ -1.14
MRPL42-202ENST00000393128 ATN1P54259 1190 aaPredicted RBP7.89□□□□□ -1.15
MRPL42-202ENST00000393128 NPM1P06748 294 aaKnown RBP eCLIP7.85□□□□□ -1.15
MRPL42-202ENST00000393128 SLAIN1Q8ND83 568 aa7.82□□□□□ -1.16
MRPL42-202ENST00000393128 SNPHO15079 494 aa7.81□□□□□ -1.16
MRPL42-202ENST00000393128 STAG3Q9UJ98 1225 aa7.81□□□□□ -1.16
MRPL42-202ENST00000393128 SEC24BO95487 1268 aa7.79□□□□□ -1.16
MRPL42-202ENST00000393128 TIE1P35590 1138 aa7.75□□□□□ -1.17
MRPL42-202ENST00000393128 IER5LQ5T953 404 aa7.75□□□□□ -1.17
MRPL42-202ENST00000393128 BMP2KQ9NSY1 1161 aaPredicted RBP7.75□□□□□ -1.17
MRPL42-202ENST00000393128 COLQQ9Y215 455 aaPredicted RBP7.74□□□□□ -1.17
MRPL42-202ENST00000393128 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
MRPL42-202ENST00000393128 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
MRPL42-202ENST00000393128 MARVELD3Q96A59 401 aa7.68□□□□□ -1.18
MRPL42-202ENST00000393128 MNX1P50219 401 aaPredicted RBP7.66□□□□□ -1.18
MRPL42-202ENST00000393128 SPDYE4A6NLX3 237 aa7.65□□□□□ -1.18
MRPL42-202ENST00000393128 EMP3P54852 163 aa7.64□□□□□ -1.19
MRPL42-202ENST00000393128 RNF166Q96A37 237 aaPredicted RBP7.64□□□□□ -1.19
MRPL42-202ENST00000393128 KIF12Q96FN5 646 aa7.63□□□□□ -1.19
MRPL42-202ENST00000393128 HS3ST6Q96QI5 342 aa7.6□□□□□ -1.19
MRPL42-202ENST00000393128 CCDC61Q9Y6R9 512 aa7.6□□□□□ -1.19
MRPL42-202ENST00000393128 TTLL13PA6NNM8 815 aa7.59□□□□□ -1.19
MRPL42-202ENST00000393128 TRPC6Q9Y210 931 aa7.56□□□□□ -1.2
MRPL42-202ENST00000393128 POTEB3A0JP26 581 aa7.54□□□□□ -1.2
MRPL42-202ENST00000393128 POTEBQ6S5H4 581 aa7.54□□□□□ -1.2
MRPL42-202ENST00000393128 TRIM35Q9UPQ4 493 aa7.54□□□□□ -1.2
MRPL42-202ENST00000393128 PLCG2P16885 1265 aa7.53□□□□□ -1.2
MRPL42-202ENST00000393128 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.53□□□□□ -1.2
MRPL42-202ENST00000393128 FAM205CA6NFA0 338 aa7.52□□□□□ -1.21
MRPL42-202ENST00000393128 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
MRPL42-202ENST00000393128 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
MRPL42-202ENST00000393128 PTGER2P43116 358 aa7.48□□□□□ -1.21
MRPL42-202ENST00000393128 MAP3K13O43283 966 aa7.48□□□□□ -1.21
MRPL42-202ENST00000393128 PROM2Q8N271 834 aa7.48□□□□□ -1.21
MRPL42-202ENST00000393128 SGIP1Q9BQI5 828 aa7.47□□□□□ -1.21
MRPL42-202ENST00000393128 FKBP8Q14318 412 aa7.46□□□□□ -1.21
MRPL42-202ENST00000393128 IRX5P78411 483 aaPredicted RBP7.44□□□□□ -1.22
MRPL42-202ENST00000393128 OCEL1Q9H607 264 aa7.4□□□□□ -1.23
MRPL42-202ENST00000393128 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
MRPL42-202ENST00000393128 C3orf67Q6ZVT6 689 aa7.31□□□□□ -1.24
MRPL42-202ENST00000393128 TMEM106CQ9BVX2 250 aa7.3□□□□□ -1.24
MRPL42-202ENST00000393128 RASEFQ8IZ41 740 aa7.29□□□□□ -1.24
MRPL42-202ENST00000393128 PCDHB13Q9Y5F0 798 aa7.29□□□□□ -1.24
MRPL42-202ENST00000393128 MIER1Q8N108 512 aa7.28□□□□□ -1.24
MRPL42-202ENST00000393128 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
MRPL42-202ENST00000393128 ERBB3P21860 1342 aa7.27□□□□□ -1.24
MRPL42-202ENST00000393128 RGS20O76081 388 aa7.26□□□□□ -1.25
MRPL42-202ENST00000393128 L3MBTL3Q96JM7 780 aaPredicted RBP7.26□□□□□ -1.25
MRPL42-202ENST00000393128 ZNF687Q8N1G0 1237 aa7.21□□□□□ -1.26
MRPL42-202ENST00000393128 PLCD3Q8N3E9 789 aa7.2□□□□□ -1.26
MRPL42-202ENST00000393128 IFNL1Q8IU54 200 aa7.2□□□□□ -1.26
MRPL42-202ENST00000393128 NUBP1P53384 320 aa7.19□□□□□ -1.26
MRPL42-202ENST00000393128 IRX2Q9BZI1 471 aaPredicted RBP7.19□□□□□ -1.26
MRPL42-202ENST00000393128 HCSTQ9UBK5 93 aa7.19□□□□□ -1.26
MRPL42-202ENST00000393128 HOXB3P14651 431 aaPredicted RBP7.18□□□□□ -1.26
MRPL42-202ENST00000393128 ZNF710Q8N1W2 664 aa7.18□□□□□ -1.26
MRPL42-202ENST00000393128 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
MRPL42-202ENST00000393128 DOK7Q18PE1 504 aa7.15□□□□□ -1.26
MRPL42-202ENST00000393128 PLEKHG5O94827 1062 aa7.15□□□□□ -1.27
MRPL42-202ENST00000393128 PDCD7Q8N8D1 485 aaKnown RBP7.14□□□□□ -1.27
MRPL42-202ENST00000393128 RIMBP2O15034 1052 aa7.11□□□□□ -1.27
MRPL42-202ENST00000393128 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
MRPL42-202ENST00000393128 VASPP50552 380 aaPredicted RBP7.1□□□□□ -1.27
MRPL42-202ENST00000393128 ZSWIM6Q9HCJ5 1215 aa7.08□□□□□ -1.28
MRPL42-202ENST00000393128 ANKRD13DQ6ZTN6 518 aa7.07□□□□□ -1.28
MRPL42-202ENST00000393128 PYGBP11216 843 aa7.06□□□□□ -1.28
MRPL42-202ENST00000393128 FAM212AQ96EL1 285 aa7.06□□□□□ -1.28
MRPL42-202ENST00000393128 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
MRPL42-202ENST00000393128 IFNLR1Q8IU57 520 aaPredicted RBP7.04□□□□□ -1.28
MRPL42-202ENST00000393128 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.28
MRPL42-202ENST00000393128 PCDHB8Q9UN66 801 aa7.03□□□□□ -1.28
MRPL42-202ENST00000393128 DCAF8Q5TAQ9 597 aa7.02□□□□□ -1.29
MRPL42-202ENST00000393128 KLHL34Q8N239 644 aa7.01□□□□□ -1.29
MRPL42-202ENST00000393128 IFFO2Q5TF58 517 aa7□□□□□ -1.29
MRPL42-202ENST00000393128 MKRN3Q13064 507 aaKnown RBP6.99□□□□□ -1.29
MRPL42-202ENST00000393128 GOLGA2Q08379 1002 aa6.96□□□□□ -1.3
MRPL42-202ENST00000393128 G3V3G9 751 aa6.95□□□□□ -1.3
MRPL42-202ENST00000393128 PBX2P40425 430 aa6.95□□□□□ -1.3
MRPL42-202ENST00000393128 ILDR1Q86SU0 546 aaPredicted RBP6.95□□□□□ -1.3
MRPL42-202ENST00000393128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.31e-8■■■■□ 20.1
MRPL42-202ENST00000393128 Q6ZNB5 142 aa6.93□□□□□ -1.3
MRPL42-202ENST00000393128 GPR153Q6NV75 609 aa6.91□□□□□ -1.3
MRPL42-202ENST00000393128 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
MRPL42-202ENST00000393128 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
MRPL42-202ENST00000393128 A0A0G2JS52 829 aa6.88□□□□□ -1.31
MRPL42-202ENST00000393128 GSE1Q14687 1217 aa6.88□□□□□ -1.31
MRPL42-202ENST00000393128 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
MRPL42-202ENST00000393128 ZNF316A6NFI3 1004 aaPredicted RBP6.86□□□□□ -1.31
MRPL42-202ENST00000393128 PSEN1P49768 467 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms