RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
TFRC-202ENST00000392396 PLEKHG5O94827 1062 aa24.45■■□□□ 1.5
TFRC-202ENST00000392396 RRP7BPQ9NSQ0 103 aa24.44■■□□□ 1.5
TFRC-202ENST00000392396 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
TFRC-202ENST00000392396 MLECQ14165 292 aa24.4■■□□□ 1.5
TFRC-202ENST00000392396 CUX2O14529 1486 aa24.38■■□□□ 1.49
TFRC-202ENST00000392396 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
TFRC-202ENST00000392396 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
TFRC-202ENST00000392396 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
TFRC-202ENST00000392396 KANK1Q14678 1352 aa24.33■■□□□ 1.49
TFRC-202ENST00000392396 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
TFRC-202ENST00000392396 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
TFRC-202ENST00000392396 RGL3Q3MIN7 710 aa24.29■■□□□ 1.48
TFRC-202ENST00000392396 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
TFRC-202ENST00000392396 TMC1Q8TDI8 760 aa24.28■■□□□ 1.48
TFRC-202ENST00000392396 SOGA1O94964 1423 aa24.28■■□□□ 1.48
TFRC-202ENST00000392396 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
TFRC-202ENST00000392396 POGKQ9P215 609 aa24.28■■□□□ 1.48
TFRC-202ENST00000392396 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
TFRC-202ENST00000392396 MYT1Q01538 1121 aa24.23■■□□□ 1.47
TFRC-202ENST00000392396 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
TFRC-202ENST00000392396 OSCARQ8IYS5 282 aa24.2■■□□□ 1.47
TFRC-202ENST00000392396 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
TFRC-202ENST00000392396 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
TFRC-202ENST00000392396 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
TFRC-202ENST00000392396 GGT6Q6P531 493 aa24.13■■□□□ 1.45
TFRC-202ENST00000392396 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
TFRC-202ENST00000392396 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
TFRC-202ENST00000392396 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
TFRC-202ENST00000392396 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
TFRC-202ENST00000392396 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
TFRC-202ENST00000392396 TNIKQ9UKE5 1360 aa24.07■■□□□ 1.44
TFRC-202ENST00000392396 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.07■■□□□ 1.44
TFRC-202ENST00000392396 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
TFRC-202ENST00000392396 ARXQ96QS3 562 aa24.05■■□□□ 1.44
TFRC-202ENST00000392396 NPHP1O15259 732 aa24■■□□□ 1.43
TFRC-202ENST00000392396 FAM9BQ8IZU0 186 aa24■■□□□ 1.43
TFRC-202ENST00000392396 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
TFRC-202ENST00000392396 DDX10Q13206 875 aaKnown RBP23.99■■□□□ 1.43
TFRC-202ENST00000392396 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
TFRC-202ENST00000392396 KNSTRNQ9Y448 316 aa23.98■■□□□ 1.43
TFRC-202ENST00000392396 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
TFRC-202ENST00000392396 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
TFRC-202ENST00000392396 MYH16Q9H6N6 1097 aa23.96■■□□□ 1.43
TFRC-202ENST00000392396 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
TFRC-202ENST00000392396 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
TFRC-202ENST00000392396 EID1Q9Y6B2 187 aa23.94■■□□□ 1.42
TFRC-202ENST00000392396 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
TFRC-202ENST00000392396 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
TFRC-202ENST00000392396 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
TFRC-202ENST00000392396 HNRNPUQ00839 825 aaKnown RBP eCLIP23.9■■□□□ 1.42
TFRC-202ENST00000392396 MRS2Q9HD23 443 aa23.89■■□□□ 1.41
TFRC-202ENST00000392396 FMN1Q68DA7 1419 aa23.87■■□□□ 1.41
TFRC-202ENST00000392396 UPF2Q9HAU5 1272 aaKnown RBP23.87■■□□□ 1.41
TFRC-202ENST00000392396 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
TFRC-202ENST00000392396 MAPK8IP3Q9UPT6 1336 aa23.83■■□□□ 1.4
TFRC-202ENST00000392396 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.4
TFRC-202ENST00000392396 HSP90AA1P07900 732 aaKnown RBP23.82■■□□□ 1.4
TFRC-202ENST00000392396 SRPK2P78362 688 aaKnown RBP23.81■■□□□ 1.4
TFRC-202ENST00000392396 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
TFRC-202ENST00000392396 KIF3BO15066 747 aa23.79■■□□□ 1.4
TFRC-202ENST00000392396 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
TFRC-202ENST00000392396 PTPRGP23470 1445 aa23.76■■□□□ 1.39
TFRC-202ENST00000392396 PNNQ9H307 717 aaKnown RBP23.76■■□□□ 1.39
TFRC-202ENST00000392396 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
TFRC-202ENST00000392396 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
TFRC-202ENST00000392396 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
TFRC-202ENST00000392396 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
TFRC-202ENST00000392396 TMF1P82094 1093 aa23.71■■□□□ 1.39
TFRC-202ENST00000392396 STK26Q9P289 416 aa23.7■■□□□ 1.38
TFRC-202ENST00000392396 CSB-PGBD3P0DP91 1061 aa23.69■■□□□ 1.38
TFRC-202ENST00000392396 ARHGAP35Q9NRY4 1499 aa23.69■■□□□ 1.38
TFRC-202ENST00000392396 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
TFRC-202ENST00000392396 HDGFL2Q7Z4V5 671 aaPredicted RBP23.68■■□□□ 1.38
TFRC-202ENST00000392396 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
TFRC-202ENST00000392396 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
TFRC-202ENST00000392396 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
TFRC-202ENST00000392396 SOX12O15370 315 aa23.66■■□□□ 1.38
TFRC-202ENST00000392396 ANP32AP39687 249 aaKnown RBP23.63■■□□□ 1.37
TFRC-202ENST00000392396 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
TFRC-202ENST00000392396 PKD2Q13563 968 aa23.61■■□□□ 1.37
TFRC-202ENST00000392396 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
TFRC-202ENST00000392396 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
TFRC-202ENST00000392396 LAS1LQ9Y4W2 734 aaKnown RBP23.59■■□□□ 1.37
TFRC-202ENST00000392396 TNNT2P45379 298 aaPredicted RBP23.58■■□□□ 1.37
TFRC-202ENST00000392396 SMARCA4P51532 1647 aa23.58■■□□□ 1.37
TFRC-202ENST00000392396 HNRNPMP52272 730 aaKnown RBP eCLIP23.58■■□□□ 1.377e-9■□□□□ 10
TFRC-202ENST00000392396 NUP155O75694 1391 aa23.58■■□□□ 1.36
TFRC-202ENST00000392396 GOLGA2Q08379 1002 aa23.53■■□□□ 1.36
TFRC-202ENST00000392396 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
TFRC-202ENST00000392396 CHMP4BQ9H444 224 aaKnown RBP23.51■■□□□ 1.35
TFRC-202ENST00000392396 TMX4Q9H1E5 349 aaPredicted RBP23.51■■□□□ 1.35
TFRC-202ENST00000392396 RTF1Q92541 710 aaKnown RBP23.51■■□□□ 1.35
TFRC-202ENST00000392396 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
TFRC-202ENST00000392396 MORC1Q86VD1 984 aa23.5■■□□□ 1.35
TFRC-202ENST00000392396 NGDNQ8NEJ9 315 aaKnown RBP23.5■■□□□ 1.35
TFRC-202ENST00000392396 WIZO95785 1651 aa23.49■■□□□ 1.35
TFRC-202ENST00000392396 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
TFRC-202ENST00000392396 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
TFRC-202ENST00000392396 FTSJ3Q8IY81 847 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms