RNA–Protein interactions for RNA: ENST00000389554.7

TBR1-201, Transcript of T-box, brain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBR1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBR1-201ENST00000389554 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
TBR1-201ENST00000389554 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
TBR1-201ENST00000389554 HSP90AA2PQ14568 343 aaPredicted RBP17.7■□□□□ 0.42
TBR1-201ENST00000389554 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
TBR1-201ENST00000389554 PPM1GO15355 546 aaPredicted RBP17.69■□□□□ 0.42
TBR1-201ENST00000389554 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
TBR1-201ENST00000389554 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
TBR1-201ENST00000389554 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
TBR1-201ENST00000389554 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
TBR1-201ENST00000389554 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
TBR1-201ENST00000389554 ZMYND15Q9H091 742 aa17.63■□□□□ 0.41
TBR1-201ENST00000389554 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
TBR1-201ENST00000389554 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
TBR1-201ENST00000389554 FBLN2P98095 1184 aa17.6■□□□□ 0.41
TBR1-201ENST00000389554 ARID3AQ99856 593 aa17.57■□□□□ 0.4
TBR1-201ENST00000389554 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
TBR1-201ENST00000389554 SOGA1O94964 1423 aa17.52■□□□□ 0.4
TBR1-201ENST00000389554 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
TBR1-201ENST00000389554 GSE1Q14687 1217 aa17.49■□□□□ 0.39
TBR1-201ENST00000389554 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
TBR1-201ENST00000389554 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
TBR1-201ENST00000389554 TRIM44Q96DX7 344 aaPredicted RBP17.43■□□□□ 0.38
TBR1-201ENST00000389554 DDRGK1Q96HY6 314 aa17.42■□□□□ 0.38
TBR1-201ENST00000389554 PDE4CQ08493 712 aa17.42■□□□□ 0.38
TBR1-201ENST00000389554 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
TBR1-201ENST00000389554 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
TBR1-201ENST00000389554 USP35Q9P2H5 1018 aa17.39■□□□□ 0.38
TBR1-201ENST00000389554 TNIKQ9UKE5 1360 aa17.39■□□□□ 0.37
TBR1-201ENST00000389554 WIZO95785 1651 aa17.39■□□□□ 0.37
TBR1-201ENST00000389554 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
TBR1-201ENST00000389554 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
TBR1-201ENST00000389554 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
TBR1-201ENST00000389554 CLIP1P30622 1438 aa17.34■□□□□ 0.37
TBR1-201ENST00000389554 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
TBR1-201ENST00000389554 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.37
TBR1-201ENST00000389554 ANP32BQ92688 251 aaKnown RBP17.33■□□□□ 0.36
TBR1-201ENST00000389554 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
TBR1-201ENST00000389554 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
TBR1-201ENST00000389554 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
TBR1-201ENST00000389554 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
TBR1-201ENST00000389554 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
TBR1-201ENST00000389554 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
TBR1-201ENST00000389554 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
TBR1-201ENST00000389554 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
TBR1-201ENST00000389554 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
TBR1-201ENST00000389554 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
TBR1-201ENST00000389554 NFKBIBQ15653 356 aa17.2■□□□□ 0.34
TBR1-201ENST00000389554 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
TBR1-201ENST00000389554 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
TBR1-201ENST00000389554 RRP9O43818 475 aaKnown RBP17.16■□□□□ 0.34
TBR1-201ENST00000389554 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
TBR1-201ENST00000389554 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
TBR1-201ENST00000389554 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
TBR1-201ENST00000389554 RGS3P49796 1198 aa17.12■□□□□ 0.33
TBR1-201ENST00000389554 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
TBR1-201ENST00000389554 EEA1Q15075 1411 aa17.11■□□□□ 0.33
TBR1-201ENST00000389554 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
TBR1-201ENST00000389554 PDE4AP27815 886 aa17.11■□□□□ 0.33
TBR1-201ENST00000389554 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
TBR1-201ENST00000389554 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
TBR1-201ENST00000389554 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
TBR1-201ENST00000389554 BECN1Q14457 450 aa17.08■□□□□ 0.32
TBR1-201ENST00000389554 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
TBR1-201ENST00000389554 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
TBR1-201ENST00000389554 TCERG1O14776 1098 aaKnown RBP17.07■□□□□ 0.32
TBR1-201ENST00000389554 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
TBR1-201ENST00000389554 DNTTIP2Q5QJE6 756 aaKnown RBP17.06■□□□□ 0.32
TBR1-201ENST00000389554 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
TBR1-201ENST00000389554 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
TBR1-201ENST00000389554 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
TBR1-201ENST00000389554 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
TBR1-201ENST00000389554 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
TBR1-201ENST00000389554 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
TBR1-201ENST00000389554 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
TBR1-201ENST00000389554 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
TBR1-201ENST00000389554 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
TBR1-201ENST00000389554 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
TBR1-201ENST00000389554 NACADO15069 1562 aa17.01■□□□□ 0.31
TBR1-201ENST00000389554 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
TBR1-201ENST00000389554 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
TBR1-201ENST00000389554 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
TBR1-201ENST00000389554 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
TBR1-201ENST00000389554 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
TBR1-201ENST00000389554 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
TBR1-201ENST00000389554 FGD1P98174 961 aa16.92■□□□□ 0.3
TBR1-201ENST00000389554 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
TBR1-201ENST00000389554 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
TBR1-201ENST00000389554 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
TBR1-201ENST00000389554 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
TBR1-201ENST00000389554 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
TBR1-201ENST00000389554 AAMPQ13685 434 aa16.87■□□□□ 0.29
TBR1-201ENST00000389554 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
TBR1-201ENST00000389554 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
TBR1-201ENST00000389554 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
TBR1-201ENST00000389554 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
TBR1-201ENST00000389554 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
TBR1-201ENST00000389554 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
TBR1-201ENST00000389554 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
TBR1-201ENST00000389554 POGKQ9P215 609 aa16.85■□□□□ 0.29
TBR1-201ENST00000389554 WASHC2CQ9Y4E1 1318 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms