RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 ATMINO43313 823 aaPredicted RBP7.05□□□□□ -1.28
MIR548A3-201ENST00000385297 STAG3Q9UJ98 1225 aa7.05□□□□□ -1.28
MIR548A3-201ENST00000385297 FAM163AQ96GL9 167 aaPredicted RBP7.03□□□□□ -1.28
MIR548A3-201ENST00000385297 MS4A3Q96HJ5 214 aa7.02□□□□□ -1.29
MIR548A3-201ENST00000385297 MNX1P50219 401 aaPredicted RBP7.01□□□□□ -1.29
MIR548A3-201ENST00000385297 SCUBE2Q9NQ36 999 aa7.01□□□□□ -1.29
MIR548A3-201ENST00000385297 NPM1P06748 294 aaKnown RBP eCLIP6.99□□□□□ -1.29
MIR548A3-201ENST00000385297 POTEFA5A3E0 1075 aa6.96□□□□□ -1.3
MIR548A3-201ENST00000385297 ATN1P54259 1190 aaPredicted RBP6.95□□□□□ -1.3
MIR548A3-201ENST00000385297 CDAN1Q8IWY9 1227 aa6.95□□□□□ -1.3
MIR548A3-201ENST00000385297 BMP2KQ9NSY1 1161 aaPredicted RBP6.88□□□□□ -1.31
MIR548A3-201ENST00000385297 CCDC61Q9Y6R9 512 aa6.87□□□□□ -1.31
MIR548A3-201ENST00000385297 KIF12Q96FN5 646 aa6.86□□□□□ -1.31
MIR548A3-201ENST00000385297 TIE1P35590 1138 aa6.84□□□□□ -1.31
MIR548A3-201ENST00000385297 MMRN1Q13201 1228 aa6.84□□□□□ -1.31
MIR548A3-201ENST00000385297 SPDYE4A6NLX3 237 aa6.83□□□□□ -1.32
MIR548A3-201ENST00000385297 TRPC6Q9Y210 931 aa6.83□□□□□ -1.32
MIR548A3-201ENST00000385297 COLQQ9Y215 455 aaPredicted RBP6.83□□□□□ -1.32
MIR548A3-201ENST00000385297 ST18O60284 1047 aa6.82□□□□□ -1.32
MIR548A3-201ENST00000385297 SPNS2Q8IVW8 549 aa6.81□□□□□ -1.32
MIR548A3-201ENST00000385297 TSPYL2Q9H2G4 693 aaPredicted RBP6.81□□□□□ -1.32
MIR548A3-201ENST00000385297 IER5LQ5T953 404 aa6.78□□□□□ -1.32
MIR548A3-201ENST00000385297 TTLL13PA6NNM8 815 aa6.77□□□□□ -1.33
MIR548A3-201ENST00000385297 SEC24BO95487 1268 aa6.77□□□□□ -1.33
MIR548A3-201ENST00000385297 MAP3K13O43283 966 aa6.76□□□□□ -1.33
MIR548A3-201ENST00000385297 SLAIN1Q8ND83 568 aa6.75□□□□□ -1.33
MIR548A3-201ENST00000385297 TMEM121BQ9BXQ6 578 aaPredicted RBP6.74□□□□□ -1.33
MIR548A3-201ENST00000385297 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
MIR548A3-201ENST00000385297 SGIP1Q9BQI5 828 aa6.7□□□□□ -1.34
MIR548A3-201ENST00000385297 RASEFQ8IZ41 740 aa6.68□□□□□ -1.34
MIR548A3-201ENST00000385297 PROM2Q8N271 834 aa6.68□□□□□ -1.34
MIR548A3-201ENST00000385297 SNPHO15079 494 aa6.64□□□□□ -1.35
MIR548A3-201ENST00000385297 IRX5P78411 483 aaPredicted RBP6.64□□□□□ -1.35
MIR548A3-201ENST00000385297 PLCG2P16885 1265 aa6.63□□□□□ -1.35
MIR548A3-201ENST00000385297 CSRNP3Q8WYN3 585 aa6.62□□□□□ -1.35
MIR548A3-201ENST00000385297 MARVELD3Q96A59 401 aa6.62□□□□□ -1.35
MIR548A3-201ENST00000385297 PCDHB13Q9Y5F0 798 aa6.62□□□□□ -1.35
MIR548A3-201ENST00000385297 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
MIR548A3-201ENST00000385297 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
MIR548A3-201ENST00000385297 IFNL1Q8IU54 200 aa6.59□□□□□ -1.35
MIR548A3-201ENST00000385297 TMEM106CQ9BVX2 250 aa6.59□□□□□ -1.35
MIR548A3-201ENST00000385297 POTEB3A0JP26 581 aa6.57□□□□□ -1.36
MIR548A3-201ENST00000385297 POTEBQ6S5H4 581 aa6.57□□□□□ -1.36
MIR548A3-201ENST00000385297 OCEL1Q9H607 264 aa6.57□□□□□ -1.36
MIR548A3-201ENST00000385297 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.57□□□□□ -1.36
MIR548A3-201ENST00000385297 PLEKHG5O94827 1062 aa6.56□□□□□ -1.36
MIR548A3-201ENST00000385297 EMP3P54852 163 aa6.54□□□□□ -1.36
MIR548A3-201ENST00000385297 MIER1Q8N108 512 aa6.54□□□□□ -1.36
MIR548A3-201ENST00000385297 HS3ST6Q96QI5 342 aa6.54□□□□□ -1.36
MIR548A3-201ENST00000385297 NUBP1P53384 320 aa6.52□□□□□ -1.37
MIR548A3-201ENST00000385297 FAM205CA6NFA0 338 aa6.49□□□□□ -1.37
MIR548A3-201ENST00000385297 PDCD7Q8N8D1 485 aaKnown RBP6.47□□□□□ -1.37
MIR548A3-201ENST00000385297 C3orf67Q6ZVT6 689 aa6.44□□□□□ -1.38
MIR548A3-201ENST00000385297 FAM212AQ96EL1 285 aa6.44□□□□□ -1.38
MIR548A3-201ENST00000385297 ZBTB47Q9UFB7 747 aaPredicted RBP6.44□□□□□ -1.38
MIR548A3-201ENST00000385297 PLCD3Q8N3E9 789 aa6.42□□□□□ -1.38
MIR548A3-201ENST00000385297 RNF166Q96A37 237 aaPredicted RBP6.42□□□□□ -1.38
MIR548A3-201ENST00000385297 L3MBTL3Q96JM7 780 aaPredicted RBP6.42□□□□□ -1.38
MIR548A3-201ENST00000385297 HOXB3P14651 431 aaPredicted RBP6.38□□□□□ -1.39
MIR548A3-201ENST00000385297 HOXB1P14653 301 aaPredicted RBP6.37□□□□□ -1.39
MIR548A3-201ENST00000385297 ILDR1Q86SU0 546 aaPredicted RBP6.37□□□□□ -1.39
MIR548A3-201ENST00000385297 PCDHB8Q9UN66 801 aa6.37□□□□□ -1.39
MIR548A3-201ENST00000385297 PYGBP11216 843 aa6.35□□□□□ -1.39
MIR548A3-201ENST00000385297 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
MIR548A3-201ENST00000385297 MKRN3Q13064 507 aaKnown RBP6.33□□□□□ -1.4
MIR548A3-201ENST00000385297 ERBB3P21860 1342 aa6.32□□□□□ -1.4
MIR548A3-201ENST00000385297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.32□□□□□ -1.4
MIR548A3-201ENST00000385297 PTGER2P43116 358 aa6.3□□□□□ -1.4
MIR548A3-201ENST00000385297 DCAF8Q5TAQ9 597 aa6.3□□□□□ -1.4
MIR548A3-201ENST00000385297 GOLGA2Q08379 1002 aa6.29□□□□□ -1.4
MIR548A3-201ENST00000385297 ZNF467Q7Z7K2 595 aaPredicted RBP6.29□□□□□ -1.4
MIR548A3-201ENST00000385297 DOK7Q18PE1 504 aa6.28□□□□□ -1.4
MIR548A3-201ENST00000385297 ZNF710Q8N1W2 664 aa6.28□□□□□ -1.4
MIR548A3-201ENST00000385297 VARS2Q5ST30 1063 aaKnown RBP6.27□□□□□ -1.41
MIR548A3-201ENST00000385297 DPY19L2Q6NUT2 758 aa6.27□□□□□ -1.41
MIR548A3-201ENST00000385297 ZNF687Q8N1G0 1237 aa6.27□□□□□ -1.41
MIR548A3-201ENST00000385297 BOLA1Q9Y3E2 137 aa6.26□□□□□ -1.41
MIR548A3-201ENST00000385297 CHRM1P11229 460 aaPredicted RBP6.24□□□□□ -1.41
MIR548A3-201ENST00000385297 PSEN1P49768 467 aa6.23□□□□□ -1.41
MIR548A3-201ENST00000385297 ZSWIM6Q9HCJ5 1215 aa6.23□□□□□ -1.41
MIR548A3-201ENST00000385297 RIMBP2O15034 1052 aa6.22□□□□□ -1.41
MIR548A3-201ENST00000385297 G3V3G9 751 aa6.2□□□□□ -1.42
MIR548A3-201ENST00000385297 EHMT2Q96KQ7 1210 aa6.2□□□□□ -1.42
MIR548A3-201ENST00000385297 GPR153Q6NV75 609 aa6.19□□□□□ -1.42
MIR548A3-201ENST00000385297 GSE1Q14687 1217 aa6.18□□□□□ -1.42
MIR548A3-201ENST00000385297 PDAP1Q13442 181 aaKnown RBP6.17□□□□□ -1.42
MIR548A3-201ENST00000385297 PLA2G2EQ9NZK7 142 aa6.17□□□□□ -1.42
MIR548A3-201ENST00000385297 ANKRD13DQ6ZTN6 518 aa6.15□□□□□ -1.42
MIR548A3-201ENST00000385297 LSM11P83369 360 aaKnown RBP eCLIP6.14□□□□□ -1.43
MIR548A3-201ENST00000385297 TMEM92Q6UXU6 159 aa6.14□□□□□ -1.43
MIR548A3-201ENST00000385297 CABP2Q9NPB3 220 aa6.14□□□□□ -1.43
MIR548A3-201ENST00000385297 HCSTQ9UBK5 93 aa6.1□□□□□ -1.43
MIR548A3-201ENST00000385297 ZNF316A6NFI3 1004 aaPredicted RBP6.09□□□□□ -1.43
MIR548A3-201ENST00000385297 MICALL2Q8IY33 904 aa6.09□□□□□ -1.43
MIR548A3-201ENST00000385297 ARSIQ5FYB1 569 aa6.08□□□□□ -1.44
MIR548A3-201ENST00000385297 PBX2P40425 430 aa6.07□□□□□ -1.44
MIR548A3-201ENST00000385297 POTEEQ6S8J3 1075 aa6.05□□□□□ -1.44
MIR548A3-201ENST00000385297 FBXO3Q9UK99 471 aa6.04□□□□□ -1.44
MIR548A3-201ENST00000385297 EFCAB3Q8N7B9 438 aa6.03□□□□□ -1.44
MIR548A3-201ENST00000385297 KHSRPQ92945 711 aaKnown RBP eCLIP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms