RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ASTLQ6HA08 431 aaPredicted RBP2.72□□□□□ -1.97
SNORD28-201ENST00000384706 ST18O60284 1047 aa2.71□□□□□ -1.98
SNORD28-201ENST00000384706 ZRANB1Q9UGI0 708 aa2.71□□□□□ -1.98
SNORD28-201ENST00000384706 POTEFA5A3E0 1075 aa2.69□□□□□ -1.98
SNORD28-201ENST00000384706 ATMINO43313 823 aaPredicted RBP2.69□□□□□ -1.98
SNORD28-201ENST00000384706 CSRNP3Q8WYN3 585 aa2.69□□□□□ -1.98
SNORD28-201ENST00000384706 EHMT2Q96KQ7 1210 aa2.66□□□□□ -1.98
SNORD28-201ENST00000384706 PHF12Q96QT6 1004 aa2.64□□□□□ -1.99
SNORD28-201ENST00000384706 TMEM121BQ9BXQ6 578 aaPredicted RBP2.64□□□□□ -1.99
SNORD28-201ENST00000384706 KRTAP3-3Q9BYR6 98 aa2.64□□□□□ -1.99
SNORD28-201ENST00000384706 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
SNORD28-201ENST00000384706 STAG3Q9UJ98 1225 aa2.64□□□□□ -1.99
SNORD28-201ENST00000384706 SPDYE4A6NLX3 237 aa2.63□□□□□ -1.99
SNORD28-201ENST00000384706 CREBZFQ9NS37 354 aa2.63□□□□□ -1.99
SNORD28-201ENST00000384706 ATN1P54259 1190 aaPredicted RBP2.61□□□□□ -1.99
SNORD28-201ENST00000384706 MS4A3Q96HJ5 214 aa2.61□□□□□ -1.99
SNORD28-201ENST00000384706 PAK3O75914 559 aaPredicted RBP2.6□□□□□ -1.99
SNORD28-201ENST00000384706 NPM1P06748 294 aaKnown RBP eCLIP2.59□□□□□ -1.99
SNORD28-201ENST00000384706 POTEB3A0JP26 581 aa2.58□□□□□ -2
SNORD28-201ENST00000384706 POTEBQ6S5H4 581 aa2.58□□□□□ -2
SNORD28-201ENST00000384706 SLAIN1Q8ND83 568 aa2.58□□□□□ -2
SNORD28-201ENST00000384706 COLQQ9Y215 455 aaPredicted RBP2.58□□□□□ -2
SNORD28-201ENST00000384706 MNX1P50219 401 aaPredicted RBP2.57□□□□□ -2
SNORD28-201ENST00000384706 TSPYL2Q9H2G4 693 aaPredicted RBP2.57□□□□□ -2
SNORD28-201ENST00000384706 MARVELD3Q96A59 401 aa2.56□□□□□ -2
SNORD28-201ENST00000384706 MIER1Q8N108 512 aa2.55□□□□□ -2
SNORD28-201ENST00000384706 RNF166Q96A37 237 aaPredicted RBP2.55□□□□□ -2
SNORD28-201ENST00000384706 HS3ST6Q96QI5 342 aa2.54□□□□□ -2
SNORD28-201ENST00000384706 BMP2KQ9NSY1 1161 aaPredicted RBP2.54□□□□□ -2
SNORD28-201ENST00000384706 SNPHO15079 494 aa2.53□□□□□ -2
SNORD28-201ENST00000384706 PLEKHG5O94827 1062 aa2.53□□□□□ -2
SNORD28-201ENST00000384706 TIE1P35590 1138 aa2.52□□□□□ -2.01
SNORD28-201ENST00000384706 IER5LQ5T953 404 aa2.52□□□□□ -2.01
SNORD28-201ENST00000384706 KIF12Q96FN5 646 aa2.52□□□□□ -2.01
SNORD28-201ENST00000384706 CCDC61Q9Y6R9 512 aa2.52□□□□□ -2.01
SNORD28-201ENST00000384706 MAP3K13O43283 966 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 SEC24BO95487 1268 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 EMP3P54852 163 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 PROM2Q8N271 834 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 PLCD3Q8N3E9 789 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 TRPC6Q9Y210 931 aa2.51□□□□□ -2.01
SNORD28-201ENST00000384706 RASEFQ8IZ41 740 aa2.5□□□□□ -2.01
SNORD28-201ENST00000384706 MYT1LQ9UL68 1186 aa2.5□□□□□ -2.01
SNORD28-201ENST00000384706 FAM205CA6NFA0 338 aa2.49□□□□□ -2.01
SNORD28-201ENST00000384706 TTLL13PA6NNM8 815 aa2.48□□□□□ -2.01
SNORD28-201ENST00000384706 PCDHB13Q9Y5F0 798 aa2.48□□□□□ -2.01
SNORD28-201ENST00000384706 TRIM35Q9UPQ4 493 aa2.47□□□□□ -2.01
SNORD28-201ENST00000384706 NUBP1P53384 320 aa2.46□□□□□ -2.02
SNORD28-201ENST00000384706 FKBP8Q14318 412 aa2.46□□□□□ -2.02
SNORD28-201ENST00000384706 DCAF8Q5TAQ9 597 aa2.46□□□□□ -2.02
SNORD28-201ENST00000384706 IFNL1Q8IU54 200 aa2.46□□□□□ -2.02
SNORD28-201ENST00000384706 TMEM106CQ9BVX2 250 aa2.46□□□□□ -2.02
SNORD28-201ENST00000384706 ZBTB47Q9UFB7 747 aaPredicted RBP2.46□□□□□ -2.02
SNORD28-201ENST00000384706 PTGER2P43116 358 aa2.45□□□□□ -2.02
SNORD28-201ENST00000384706 FAM212AQ96EL1 285 aa2.45□□□□□ -2.02
SNORD28-201ENST00000384706 SGIP1Q9BQI5 828 aa2.45□□□□□ -2.02
SNORD28-201ENST00000384706 LOC100996750A0A140TA64 210 aa2.44□□□□□ -2.02
SNORD28-201ENST00000384706 PYGBP11216 843 aa2.44□□□□□ -2.02
SNORD28-201ENST00000384706 IRX5P78411 483 aaPredicted RBP2.44□□□□□ -2.02
SNORD28-201ENST00000384706 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
SNORD28-201ENST00000384706 PLA2G2EQ9NZK7 142 aa2.44□□□□□ -2.02
SNORD28-201ENST00000384706 PLCG2P16885 1265 aa2.43□□□□□ -2.02
SNORD28-201ENST00000384706 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.43□□□□□ -2.02
SNORD28-201ENST00000384706 PCDHB8Q9UN66 801 aa2.43□□□□□ -2.02
SNORD28-201ENST00000384706 KLHL34Q8N239 644 aa2.42□□□□□ -2.02
SNORD28-201ENST00000384706 OCEL1Q9H607 264 aa2.42□□□□□ -2.02
SNORD28-201ENST00000384706 RGS20O76081 388 aa2.41□□□□□ -2.02
SNORD28-201ENST00000384706 FBXO3Q9UK99 471 aa2.41□□□□□ -2.02
SNORD28-201ENST00000384706 GOLGA2Q08379 1002 aa2.4□□□□□ -2.03
SNORD28-201ENST00000384706 IRX2Q9BZI1 471 aaPredicted RBP2.4□□□□□ -2.03
SNORD28-201ENST00000384706 HOXB1P14653 301 aaPredicted RBP2.39□□□□□ -2.03
SNORD28-201ENST00000384706 MKRN3Q13064 507 aaKnown RBP2.39□□□□□ -2.03
SNORD28-201ENST00000384706 GSE1Q14687 1217 aa2.39□□□□□ -2.03
SNORD28-201ENST00000384706 HOXB3P14651 431 aaPredicted RBP2.38□□□□□ -2.03
SNORD28-201ENST00000384706 ZNF467Q7Z7K2 595 aaPredicted RBP2.38□□□□□ -2.03
SNORD28-201ENST00000384706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.38□□□□□ -2.03
SNORD28-201ENST00000384706 PSEN1P49768 467 aa2.37□□□□□ -2.03
SNORD28-201ENST00000384706 VASPP50552 380 aaPredicted RBP2.37□□□□□ -2.03
SNORD28-201ENST00000384706 C3orf67Q6ZVT6 689 aa2.37□□□□□ -2.03
SNORD28-201ENST00000384706 ZNF687Q8N1G0 1237 aa2.37□□□□□ -2.03
SNORD28-201ENST00000384706 PDCD7Q8N8D1 485 aaKnown RBP2.37□□□□□ -2.03
SNORD28-201ENST00000384706 L3MBTL3Q96JM7 780 aaPredicted RBP2.37□□□□□ -2.03
SNORD28-201ENST00000384706 CIZ1Q9ULV3 898 aaPredicted RBP2.37□□□□□ -2.03
SNORD28-201ENST00000384706 G3V3G9 751 aa2.36□□□□□ -2.03
SNORD28-201ENST00000384706 CHRM1P11229 460 aaPredicted RBP2.36□□□□□ -2.03
SNORD28-201ENST00000384706 DPY19L2Q6NUT2 758 aa2.36□□□□□ -2.03
SNORD28-201ENST00000384706 ERBB3P21860 1342 aa2.36□□□□□ -2.03
SNORD28-201ENST00000384706 PDAP1Q13442 181 aaKnown RBP2.35□□□□□ -2.03
SNORD28-201ENST00000384706 CABP2Q9NPB3 220 aa2.35□□□□□ -2.03
SNORD28-201ENST00000384706 HCSTQ9UBK5 93 aa2.35□□□□□ -2.03
SNORD28-201ENST00000384706 IFFO2Q5TF58 517 aa2.34□□□□□ -2.03
SNORD28-201ENST00000384706 IFNLR1Q8IU57 520 aaPredicted RBP2.34□□□□□ -2.03
SNORD28-201ENST00000384706 SPOCK2Q92563 424 aa2.34□□□□□ -2.03
SNORD28-201ENST00000384706 LCE2BO14633 110 aa2.33□□□□□ -2.04
SNORD28-201ENST00000384706 VARS2Q5ST30 1063 aaKnown RBP2.33□□□□□ -2.04
SNORD28-201ENST00000384706 ZNF710Q8N1W2 664 aa2.33□□□□□ -2.04
SNORD28-201ENST00000384706 BOLA1Q9Y3E2 137 aa2.33□□□□□ -2.04
SNORD28-201ENST00000384706 ILDR1Q86SU0 546 aaPredicted RBP2.32□□□□□ -2.04
SNORD28-201ENST00000384706 EFCAB3Q8N7B9 438 aa2.31□□□□□ -2.04
SNORD28-201ENST00000384706 RIMBP2O15034 1052 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms