RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
RNU6-48P-201ENST00000384161 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
RNU6-48P-201ENST00000384161 MS4A3Q96HJ5 214 aa9.18□□□□□ -0.94
RNU6-48P-201ENST00000384161 METRNQ9UJH8 293 aa9.18□□□□□ -0.94
RNU6-48P-201ENST00000384161 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
RNU6-48P-201ENST00000384161 C7P10643 843 aa9.16□□□□□ -0.94
RNU6-48P-201ENST00000384161 SLC39A7Q92504 469 aa9.16□□□□□ -0.94
RNU6-48P-201ENST00000384161 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
RNU6-48P-201ENST00000384161 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
RNU6-48P-201ENST00000384161 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
RNU6-48P-201ENST00000384161 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
RNU6-48P-201ENST00000384161 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
RNU6-48P-201ENST00000384161 PROM2Q8N271 834 aa9.03□□□□□ -0.96
RNU6-48P-201ENST00000384161 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
RNU6-48P-201ENST00000384161 TRPC6Q9Y210 931 aa9.02□□□□□ -0.97
RNU6-48P-201ENST00000384161 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
RNU6-48P-201ENST00000384161 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
RNU6-48P-201ENST00000384161 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
RNU6-48P-201ENST00000384161 TIE1P35590 1138 aa8.95□□□□□ -0.98
RNU6-48P-201ENST00000384161 MAP3K13O43283 966 aa8.94□□□□□ -0.98
RNU6-48P-201ENST00000384161 COLQQ9Y215 455 aaPredicted RBP8.94□□□□□ -0.98
RNU6-48P-201ENST00000384161 TTLL13PA6NNM8 815 aa8.9□□□□□ -0.98
RNU6-48P-201ENST00000384161 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
RNU6-48P-201ENST00000384161 CDAN1Q8IWY9 1227 aa8.88□□□□□ -0.99
RNU6-48P-201ENST00000384161 IER5LQ5T953 404 aa8.84□□□□□ -0.99
RNU6-48P-201ENST00000384161 SGIP1Q9BQI5 828 aa8.83□□□□□ -1
RNU6-48P-201ENST00000384161 TRIM35Q9UPQ4 493 aa8.82□□□□□ -1
RNU6-48P-201ENST00000384161 ST18O60284 1047 aa8.81□□□□□ -1
RNU6-48P-201ENST00000384161 SEC24BO95487 1268 aa8.81□□□□□ -1
RNU6-48P-201ENST00000384161 MIER1Q8N108 512 aa8.76□□□□□ -1.01
RNU6-48P-201ENST00000384161 NUBP1P53384 320 aa8.75□□□□□ -1.01
RNU6-48P-201ENST00000384161 SLAIN1Q8ND83 568 aa8.75□□□□□ -1.01
RNU6-48P-201ENST00000384161 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
RNU6-48P-201ENST00000384161 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
RNU6-48P-201ENST00000384161 IRX5P78411 483 aaPredicted RBP8.73□□□□□ -1.01
RNU6-48P-201ENST00000384161 MMRN1Q13201 1228 aa8.71□□□□□ -1.02
RNU6-48P-201ENST00000384161 SPNS2Q8IVW8 549 aa8.71□□□□□ -1.02
RNU6-48P-201ENST00000384161 PLEKHG5O94827 1062 aa8.7□□□□□ -1.02
RNU6-48P-201ENST00000384161 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
RNU6-48P-201ENST00000384161 PLCG2P16885 1265 aa8.66□□□□□ -1.02
RNU6-48P-201ENST00000384161 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
RNU6-48P-201ENST00000384161 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
RNU6-48P-201ENST00000384161 PLCD3Q8N3E9 789 aa8.62□□□□□ -1.03
RNU6-48P-201ENST00000384161 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.03
RNU6-48P-201ENST00000384161 SNPHO15079 494 aa8.57□□□□□ -1.04
RNU6-48P-201ENST00000384161 MARVELD3Q96A59 401 aa8.57□□□□□ -1.04
RNU6-48P-201ENST00000384161 FAM212AQ96EL1 285 aa8.57□□□□□ -1.04
RNU6-48P-201ENST00000384161 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
RNU6-48P-201ENST00000384161 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
RNU6-48P-201ENST00000384161 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
RNU6-48P-201ENST00000384161 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
RNU6-48P-201ENST00000384161 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
RNU6-48P-201ENST00000384161 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
RNU6-48P-201ENST00000384161 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
RNU6-48P-201ENST00000384161 PYGBP11216 843 aa8.5□□□□□ -1.05
RNU6-48P-201ENST00000384161 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.06
RNU6-48P-201ENST00000384161 HS3ST6Q96QI5 342 aa8.46□□□□□ -1.06
RNU6-48P-201ENST00000384161 EMP3P54852 163 aa8.45□□□□□ -1.06
RNU6-48P-201ENST00000384161 DCAF8Q5TAQ9 597 aa8.45□□□□□ -1.06
RNU6-48P-201ENST00000384161 L3MBTL3Q96JM7 780 aaPredicted RBP8.42□□□□□ -1.06
RNU6-48P-201ENST00000384161 FAM205CA6NFA0 338 aa8.41□□□□□ -1.06
RNU6-48P-201ENST00000384161 C3orf67Q6ZVT6 689 aa8.4□□□□□ -1.06
RNU6-48P-201ENST00000384161 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
RNU6-48P-201ENST00000384161 HOXB3P14651 431 aaPredicted RBP8.38□□□□□ -1.07
RNU6-48P-201ENST00000384161 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
RNU6-48P-201ENST00000384161 ZNF467Q7Z7K2 595 aaPredicted RBP8.36□□□□□ -1.07
RNU6-48P-201ENST00000384161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNU6-48P-201ENST00000384161 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
RNU6-48P-201ENST00000384161 PSEN1P49768 467 aa8.33□□□□□ -1.08
RNU6-48P-201ENST00000384161 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
RNU6-48P-201ENST00000384161 FKBP8Q14318 412 aa8.31□□□□□ -1.08
RNU6-48P-201ENST00000384161 GSE1Q14687 1217 aa8.31□□□□□ -1.08
RNU6-48P-201ENST00000384161 GOLGA2Q08379 1002 aa8.28□□□□□ -1.08
RNU6-48P-201ENST00000384161 BOLA1Q9Y3E2 137 aa8.27□□□□□ -1.09
RNU6-48P-201ENST00000384161 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
RNU6-48P-201ENST00000384161 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
RNU6-48P-201ENST00000384161 FBXO3Q9UK99 471 aa8.23□□□□□ -1.09
RNU6-48P-201ENST00000384161 ERBB3P21860 1342 aa8.21□□□□□ -1.1
RNU6-48P-201ENST00000384161 VASPP50552 380 aaPredicted RBP8.2□□□□□ -1.1
RNU6-48P-201ENST00000384161 CABP2Q9NPB3 220 aa8.2□□□□□ -1.1
RNU6-48P-201ENST00000384161 DOK7Q18PE1 504 aa8.19□□□□□ -1.1
RNU6-48P-201ENST00000384161 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
RNU6-48P-201ENST00000384161 VARS2Q5ST30 1063 aaKnown RBP8.17□□□□□ -1.1
RNU6-48P-201ENST00000384161 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
RNU6-48P-201ENST00000384161 ZNF687Q8N1G0 1237 aa8.17□□□□□ -1.1
RNU6-48P-201ENST00000384161 KLHL34Q8N239 644 aa8.17□□□□□ -1.1
RNU6-48P-201ENST00000384161 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
RNU6-48P-201ENST00000384161 GPR153Q6NV75 609 aa8.16□□□□□ -1.1
RNU6-48P-201ENST00000384161 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
RNU6-48P-201ENST00000384161 G3V3G9 751 aa8.13□□□□□ -1.11
RNU6-48P-201ENST00000384161 RIMBP2O15034 1052 aa8.1□□□□□ -1.11
RNU6-48P-201ENST00000384161 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
RNU6-48P-201ENST00000384161 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
RNU6-48P-201ENST00000384161 PTGER2P43116 358 aa8.08□□□□□ -1.12
RNU6-48P-201ENST00000384161 IFNLR1Q8IU57 520 aaPredicted RBP8.07□□□□□ -1.12
RNU6-48P-201ENST00000384161 SPOCK2Q92563 424 aa8.05□□□□□ -1.12
RNU6-48P-201ENST00000384161 MS4A4AQ96JQ5 239 aa8.05□□□□□ -1.12
RNU6-48P-201ENST00000384161 CIZ1Q9ULV3 898 aaPredicted RBP8.03□□□□□ -1.12
RNU6-48P-201ENST00000384161 ARSIQ5FYB1 569 aa8.02□□□□□ -1.13
RNU6-48P-201ENST00000384161 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms