RNA–Protein interactions for RNA: ENST00000384114.1

RNU6-409P-201, Transcript of RNA, U6 small nuclear 409, pseudogene, humanhuman

BASIC

Gene RNU6-409P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-409P-201ENST00000384114 SLC39A7Q92504 469 aa5.74□□□□□ -1.49
RNU6-409P-201ENST00000384114 ASTLQ6HA08 431 aaPredicted RBP5.71□□□□□ -1.5
RNU6-409P-201ENST00000384114 PABPN1Q86U42 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU6-409P-201ENST00000384114 ATMINO43313 823 aaPredicted RBP5.67□□□□□ -1.5
RNU6-409P-201ENST00000384114 PHF12Q96QT6 1004 aa5.66□□□□□ -1.5
RNU6-409P-201ENST00000384114 POTEFA5A3E0 1075 aa5.65□□□□□ -1.5
RNU6-409P-201ENST00000384114 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
RNU6-409P-201ENST00000384114 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
RNU6-409P-201ENST00000384114 MARVELD3Q96A59 401 aa5.56□□□□□ -1.52
RNU6-409P-201ENST00000384114 TMEM121BQ9BXQ6 578 aaPredicted RBP5.56□□□□□ -1.52
RNU6-409P-201ENST00000384114 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
RNU6-409P-201ENST00000384114 ATN1P54259 1190 aaPredicted RBP5.55□□□□□ -1.52
RNU6-409P-201ENST00000384114 MS4A3Q96HJ5 214 aa5.53□□□□□ -1.52
RNU6-409P-201ENST00000384114 SLAIN1Q8ND83 568 aa5.52□□□□□ -1.53
RNU6-409P-201ENST00000384114 COLQQ9Y215 455 aaPredicted RBP5.49□□□□□ -1.53
RNU6-409P-201ENST00000384114 STAG3Q9UJ98 1225 aa5.48□□□□□ -1.53
RNU6-409P-201ENST00000384114 POTEB3A0JP26 581 aa5.47□□□□□ -1.53
RNU6-409P-201ENST00000384114 PAK3O75914 559 aaPredicted RBP5.47□□□□□ -1.53
RNU6-409P-201ENST00000384114 POTEBQ6S5H4 581 aa5.47□□□□□ -1.53
RNU6-409P-201ENST00000384114 MNX1P50219 401 aaPredicted RBP5.46□□□□□ -1.54
RNU6-409P-201ENST00000384114 RNF166Q96A37 237 aaPredicted RBP5.45□□□□□ -1.54
RNU6-409P-201ENST00000384114 NPM1P06748 294 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-409P-201ENST00000384114 SEC24BO95487 1268 aa5.4□□□□□ -1.54
RNU6-409P-201ENST00000384114 HS3ST6Q96QI5 342 aa5.4□□□□□ -1.54
RNU6-409P-201ENST00000384114 EMP3P54852 163 aa5.39□□□□□ -1.55
RNU6-409P-201ENST00000384114 BMP2KQ9NSY1 1161 aaPredicted RBP5.39□□□□□ -1.55
RNU6-409P-201ENST00000384114 SNPHO15079 494 aa5.36□□□□□ -1.55
RNU6-409P-201ENST00000384114 FAM205CA6NFA0 338 aa5.35□□□□□ -1.55
RNU6-409P-201ENST00000384114 SPDYE4A6NLX3 237 aa5.35□□□□□ -1.55
RNU6-409P-201ENST00000384114 TRPC6Q9Y210 931 aa5.35□□□□□ -1.55
RNU6-409P-201ENST00000384114 CCDC61Q9Y6R9 512 aa5.34□□□□□ -1.55
RNU6-409P-201ENST00000384114 MYT1LQ9UL68 1186 aa5.33□□□□□ -1.56
RNU6-409P-201ENST00000384114 KIF12Q96FN5 646 aa5.32□□□□□ -1.56
RNU6-409P-201ENST00000384114 TSPYL2Q9H2G4 693 aaPredicted RBP5.3□□□□□ -1.56
RNU6-409P-201ENST00000384114 TIE1P35590 1138 aa5.29□□□□□ -1.56
RNU6-409P-201ENST00000384114 CSRNP3Q8WYN3 585 aa5.28□□□□□ -1.56
RNU6-409P-201ENST00000384114 TTLL13PA6NNM8 815 aa5.26□□□□□ -1.57
RNU6-409P-201ENST00000384114 MAP3K13O43283 966 aa5.26□□□□□ -1.57
RNU6-409P-201ENST00000384114 IER5LQ5T953 404 aa5.26□□□□□ -1.57
RNU6-409P-201ENST00000384114 PLA2G2EQ9NZK7 142 aa5.24□□□□□ -1.57
RNU6-409P-201ENST00000384114 PROM2Q8N271 834 aa5.23□□□□□ -1.57
RNU6-409P-201ENST00000384114 RASEFQ8IZ41 740 aa5.21□□□□□ -1.58
RNU6-409P-201ENST00000384114 TRIM35Q9UPQ4 493 aa5.21□□□□□ -1.58
RNU6-409P-201ENST00000384114 SGIP1Q9BQI5 828 aa5.2□□□□□ -1.58
RNU6-409P-201ENST00000384114 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.18□□□□□ -1.58
RNU6-409P-201ENST00000384114 PLCG2P16885 1265 aa5.15□□□□□ -1.59
RNU6-409P-201ENST00000384114 IRX5P78411 483 aaPredicted RBP5.15□□□□□ -1.59
RNU6-409P-201ENST00000384114 IRX2Q9BZI1 471 aaPredicted RBP5.15□□□□□ -1.59
RNU6-409P-201ENST00000384114 PCDHB13Q9Y5F0 798 aa5.15□□□□□ -1.59
RNU6-409P-201ENST00000384114 IFNL1Q8IU54 200 aa5.14□□□□□ -1.59
RNU6-409P-201ENST00000384114 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
RNU6-409P-201ENST00000384114 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
RNU6-409P-201ENST00000384114 MIER1Q8N108 512 aa5.12□□□□□ -1.59
RNU6-409P-201ENST00000384114 PLEKHG5O94827 1062 aa5.11□□□□□ -1.59
RNU6-409P-201ENST00000384114 PTGER2P43116 358 aa5.11□□□□□ -1.59
RNU6-409P-201ENST00000384114 TMEM106CQ9BVX2 250 aa5.11□□□□□ -1.59
RNU6-409P-201ENST00000384114 NUBP1P53384 320 aa5.1□□□□□ -1.59
RNU6-409P-201ENST00000384114 OCEL1Q9H607 264 aa5.09□□□□□ -1.59
RNU6-409P-201ENST00000384114 ERBB3P21860 1342 aa5.07□□□□□ -1.6
RNU6-409P-201ENST00000384114 HOXB1P14653 301 aaPredicted RBP5.03□□□□□ -1.6
RNU6-409P-201ENST00000384114 VARS2Q5ST30 1063 aaKnown RBP5.03□□□□□ -1.6
RNU6-409P-201ENST00000384114 PLCD3Q8N3E9 789 aa5.03□□□□□ -1.6
RNU6-409P-201ENST00000384114 PDCD7Q8N8D1 485 aaKnown RBP5.03□□□□□ -1.6
RNU6-409P-201ENST00000384114 ZBTB47Q9UFB7 747 aaPredicted RBP5.03□□□□□ -1.6
RNU6-409P-201ENST00000384114 FAM212AQ96EL1 285 aa5.02□□□□□ -1.61
RNU6-409P-201ENST00000384114 HOXB3P14651 431 aaPredicted RBP5□□□□□ -1.61
RNU6-409P-201ENST00000384114 ANKRD13DQ6ZTN6 518 aa5□□□□□ -1.61
RNU6-409P-201ENST00000384114 HCSTQ9UBK5 93 aa5□□□□□ -1.61
RNU6-409P-201ENST00000384114 RGS20O76081 388 aa4.99□□□□□ -1.61
RNU6-409P-201ENST00000384114 C3orf67Q6ZVT6 689 aa4.99□□□□□ -1.61
RNU6-409P-201ENST00000384114 ZNF687Q8N1G0 1237 aa4.99□□□□□ -1.61
RNU6-409P-201ENST00000384114 PCDHB8Q9UN66 801 aa4.99□□□□□ -1.61
RNU6-409P-201ENST00000384114 Q6ZNB5 142 aa4.98□□□□□ -1.61
RNU6-409P-201ENST00000384114 EHMT2Q96KQ7 1210 aa4.98□□□□□ -1.61
RNU6-409P-201ENST00000384114 PYGBP11216 843 aa4.97□□□□□ -1.61
RNU6-409P-201ENST00000384114 L3MBTL3Q96JM7 780 aaPredicted RBP4.97□□□□□ -1.61
RNU6-409P-201ENST00000384114 ILDR1Q86SU0 546 aaPredicted RBP4.96□□□□□ -1.62
RNU6-409P-201ENST00000384114 LCE2BO14633 110 aa4.94□□□□□ -1.62
RNU6-409P-201ENST00000384114 DCAF8Q5TAQ9 597 aa4.93□□□□□ -1.62
RNU6-409P-201ENST00000384114 MKRN3Q13064 507 aaKnown RBP4.92□□□□□ -1.62
RNU6-409P-201ENST00000384114 ZNF710Q8N1W2 664 aa4.92□□□□□ -1.62
RNU6-409P-201ENST00000384114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU6-409P-201ENST00000384114 GOLGA2Q08379 1002 aa4.9□□□□□ -1.63
RNU6-409P-201ENST00000384114 ZNF467Q7Z7K2 595 aaPredicted RBP4.9□□□□□ -1.63
RNU6-409P-201ENST00000384114 LSM11P83369 360 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-409P-201ENST00000384114 DPY19L2Q6NUT2 758 aa4.89□□□□□ -1.63
RNU6-409P-201ENST00000384114 CHRM1P11229 460 aaPredicted RBP4.88□□□□□ -1.63
RNU6-409P-201ENST00000384114 PSEN1P49768 467 aa4.86□□□□□ -1.63
RNU6-409P-201ENST00000384114 BOLA1Q9Y3E2 137 aa4.86□□□□□ -1.63
RNU6-409P-201ENST00000384114 DOK7Q18PE1 504 aa4.85□□□□□ -1.63
RNU6-409P-201ENST00000384114 GSE1Q14687 1217 aa4.84□□□□□ -1.63
RNU6-409P-201ENST00000384114 ZNF775Q96BV0 537 aaPredicted RBP4.84□□□□□ -1.63
RNU6-409P-201ENST00000384114 A0A0G2JS52 829 aa4.82□□□□□ -1.64
RNU6-409P-201ENST00000384114 PDAP1Q13442 181 aaKnown RBP4.82□□□□□ -1.64
RNU6-409P-201ENST00000384114 TRAF7Q6Q0C0 670 aa4.82□□□□□ -1.64
RNU6-409P-201ENST00000384114 RIMBP2O15034 1052 aa4.81□□□□□ -1.64
RNU6-409P-201ENST00000384114 IFFO2Q5TF58 517 aa4.81□□□□□ -1.64
RNU6-409P-201ENST00000384114 GPR153Q6NV75 609 aa4.81□□□□□ -1.64
RNU6-409P-201ENST00000384114 ZSWIM6Q9HCJ5 1215 aa4.81□□□□□ -1.64
RNU6-409P-201ENST00000384114 G3V3G9 751 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms