RNA–Protein interactions for RNA: ENST00000381291.8

ITSN1-205, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-205ENST00000381291 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
ITSN1-205ENST00000381291 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
ITSN1-205ENST00000381291 NACADO15069 1562 aa20.64■□□□□ 0.89
ITSN1-205ENST00000381291 MRS2Q9HD23 443 aa20.64■□□□□ 0.89
ITSN1-205ENST00000381291 FKBP8Q14318 412 aa20.63■□□□□ 0.89
ITSN1-205ENST00000381291 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
ITSN1-205ENST00000381291 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
ITSN1-205ENST00000381291 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
ITSN1-205ENST00000381291 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
ITSN1-205ENST00000381291 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
ITSN1-205ENST00000381291 ACIN1Q9UKV3 1341 aaKnown RBP20.58■□□□□ 0.88
ITSN1-205ENST00000381291 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
ITSN1-205ENST00000381291 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
ITSN1-205ENST00000381291 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.55■□□□□ 0.88
ITSN1-205ENST00000381291 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
ITSN1-205ENST00000381291 EEA1Q15075 1411 aa20.54■□□□□ 0.88
ITSN1-205ENST00000381291 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
ITSN1-205ENST00000381291 LMOD2Q6P5Q4 547 aa20.49■□□□□ 0.87
ITSN1-205ENST00000381291 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
ITSN1-205ENST00000381291 CCDC136Q96JN2 1154 aa20.47■□□□□ 0.87
ITSN1-205ENST00000381291 MLECQ14165 292 aa20.46■□□□□ 0.87
ITSN1-205ENST00000381291 ARXQ96QS3 562 aa20.43■□□□□ 0.86
ITSN1-205ENST00000381291 POGKQ9P215 609 aa20.42■□□□□ 0.86
ITSN1-205ENST00000381291 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
ITSN1-205ENST00000381291 CARD11Q9BXL7 1154 aa20.4■□□□□ 0.86
ITSN1-205ENST00000381291 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
ITSN1-205ENST00000381291 CDCA8Q53HL2 280 aa20.38■□□□□ 0.85
ITSN1-205ENST00000381291 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
ITSN1-205ENST00000381291 KNSTRNQ9Y448 316 aa20.38■□□□□ 0.85
ITSN1-205ENST00000381291 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ITSN1-205ENST00000381291 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
ITSN1-205ENST00000381291 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
ITSN1-205ENST00000381291 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
ITSN1-205ENST00000381291 IRX6P78412 446 aaPredicted RBP20.34■□□□□ 0.85
ITSN1-205ENST00000381291 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
ITSN1-205ENST00000381291 CARMIL1Q5VZK9 1371 aa20.32■□□□□ 0.84
ITSN1-205ENST00000381291 CUX2O14529 1486 aa20.32■□□□□ 0.84
ITSN1-205ENST00000381291 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
ITSN1-205ENST00000381291 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
ITSN1-205ENST00000381291 MIER1Q8N108 512 aa20.3■□□□□ 0.84
ITSN1-205ENST00000381291 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
ITSN1-205ENST00000381291 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
ITSN1-205ENST00000381291 GGT6Q6P531 493 aa20.26■□□□□ 0.83
ITSN1-205ENST00000381291 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
ITSN1-205ENST00000381291 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
ITSN1-205ENST00000381291 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
ITSN1-205ENST00000381291 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
ITSN1-205ENST00000381291 KANK1Q14678 1352 aa20.2■□□□□ 0.82
ITSN1-205ENST00000381291 NUDCQ9Y266 331 aa20.2■□□□□ 0.82
ITSN1-205ENST00000381291 SOX12O15370 315 aa20.2■□□□□ 0.82
ITSN1-205ENST00000381291 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
ITSN1-205ENST00000381291 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
ITSN1-205ENST00000381291 HDGFP51858 240 aaKnown RBP20.19■□□□□ 0.82
ITSN1-205ENST00000381291 SAFB2Q14151 953 aaKnown RBP eCLIP20.18■□□□□ 0.82
ITSN1-205ENST00000381291 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
ITSN1-205ENST00000381291 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
ITSN1-205ENST00000381291 NPHP1O15259 732 aa20.17■□□□□ 0.82
ITSN1-205ENST00000381291 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
ITSN1-205ENST00000381291 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
ITSN1-205ENST00000381291 SOGA1O94964 1423 aa20.14■□□□□ 0.81
ITSN1-205ENST00000381291 SRPK2P78362 688 aaKnown RBP20.13■□□□□ 0.81
ITSN1-205ENST00000381291 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
ITSN1-205ENST00000381291 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
ITSN1-205ENST00000381291 STK26Q9P289 416 aa20.09■□□□□ 0.81
ITSN1-205ENST00000381291 TMF1P82094 1093 aa20.07■□□□□ 0.8
ITSN1-205ENST00000381291 EFCAB2Q5VUJ9 269 aa20.05■□□□□ 0.8
ITSN1-205ENST00000381291 FRAT1Q92837 279 aaPredicted RBP20.03■□□□□ 0.8
ITSN1-205ENST00000381291 NBR1Q14596 966 aa20.03■□□□□ 0.8
ITSN1-205ENST00000381291 PKD2Q13563 968 aa20.02■□□□□ 0.8
ITSN1-205ENST00000381291 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
ITSN1-205ENST00000381291 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
ITSN1-205ENST00000381291 FOXD1Q16676 465 aa19.99■□□□□ 0.79
ITSN1-205ENST00000381291 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
ITSN1-205ENST00000381291 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
ITSN1-205ENST00000381291 MORC1Q86VD1 984 aa19.96■□□□□ 0.79
ITSN1-205ENST00000381291 CDK11BP21127 795 aaKnown RBP19.96■□□□□ 0.79
ITSN1-205ENST00000381291 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
ITSN1-205ENST00000381291 KIF3BO15066 747 aa19.95■□□□□ 0.78
ITSN1-205ENST00000381291 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
ITSN1-205ENST00000381291 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
ITSN1-205ENST00000381291 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
ITSN1-205ENST00000381291 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
ITSN1-205ENST00000381291 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
ITSN1-205ENST00000381291 BECN1Q14457 450 aa19.92■□□□□ 0.78
ITSN1-205ENST00000381291 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
ITSN1-205ENST00000381291 TAOK2Q9UL54 1235 aa19.91■□□□□ 0.78
ITSN1-205ENST00000381291 NCLP19338 710 aaKnown RBP19.9■□□□□ 0.78
ITSN1-205ENST00000381291 NUP155O75694 1391 aa19.9■□□□□ 0.78
ITSN1-205ENST00000381291 HDGFL2Q7Z4V5 671 aaPredicted RBP19.89■□□□□ 0.78
ITSN1-205ENST00000381291 HNRNPMP52272 730 aaKnown RBP eCLIP19.89■□□□□ 0.77
ITSN1-205ENST00000381291 CSB-PGBD3P0DP91 1061 aa19.88■□□□□ 0.77
ITSN1-205ENST00000381291 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
ITSN1-205ENST00000381291 GOLGA2Q08379 1002 aa19.88■□□□□ 0.77
ITSN1-205ENST00000381291 RGS3P49796 1198 aa19.87■□□□□ 0.77
ITSN1-205ENST00000381291 TPRNQ4KMQ1 711 aa19.87■□□□□ 0.77
ITSN1-205ENST00000381291 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
ITSN1-205ENST00000381291 TULP1O00294 542 aaPredicted RBP19.86■□□□□ 0.77
ITSN1-205ENST00000381291 EIF5BO60841 1220 aaKnown RBP19.86■□□□□ 0.77
ITSN1-205ENST00000381291 RTF1Q92541 710 aaKnown RBP19.86■□□□□ 0.77
ITSN1-205ENST00000381291 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms