RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.29□□□□□ -1.4
PTCD2-202ENST00000380639 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
PTCD2-202ENST00000380639 PRKCSHP14314 528 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-202ENST00000380639 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
PTCD2-202ENST00000380639 PKNOX2Q96KN3 472 aa6.27□□□□□ -1.41
PTCD2-202ENST00000380639 ZRSR1Q15695 479 aaKnown RBP6.27□□□□□ -1.41
PTCD2-202ENST00000380639 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
PTCD2-202ENST00000380639 TSPYL1Q9H0U9 437 aa6.26□□□□□ -1.41
PTCD2-202ENST00000380639 PDE4CQ08493 712 aa6.25□□□□□ -1.41
PTCD2-202ENST00000380639 FBXO3Q9UK99 471 aa6.25□□□□□ -1.41
PTCD2-202ENST00000380639 CCDC9Q9Y3X0 531 aaKnown RBP6.25□□□□□ -1.41
PTCD2-202ENST00000380639 HRCP23327 699 aa6.25□□□□□ -1.41
PTCD2-202ENST00000380639 DYDC1Q8WWB3 177 aa6.24□□□□□ -1.41
PTCD2-202ENST00000380639 AXDND1Q5T1B0 1012 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-202ENST00000380639 NRDCO43847 1150 aa6.22□□□□□ -1.41
PTCD2-202ENST00000380639 PAF1Q8N7H5 531 aa6.22□□□□□ -1.41
PTCD2-202ENST00000380639 MSNP26038 577 aaKnown RBP6.22□□□□□ -1.41
PTCD2-202ENST00000380639 DEKP35659 375 aaKnown RBP6.22□□□□□ -1.41
PTCD2-202ENST00000380639 MAP7D2Q96T17 732 aa6.22□□□□□ -1.41
PTCD2-202ENST00000380639 HSP90AA2PQ14568 343 aaPredicted RBP6.22□□□□□ -1.41
PTCD2-202ENST00000380639 CFAP44Q96MT7 982 aa6.21□□□□□ -1.41
PTCD2-202ENST00000380639 DIEXFQ68CQ4 756 aaKnown RBP6.21□□□□□ -1.42
PTCD2-202ENST00000380639 SEPT11Q9NVA2 429 aaKnown RBP6.2□□□□□ -1.42
PTCD2-202ENST00000380639 ZBTB7CA1YPR0 619 aa6.2□□□□□ -1.42
PTCD2-202ENST00000380639 ZNF771Q7L3S4 317 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-202ENST00000380639 HTATSF1O43719 755 aaKnown RBP6.2□□□□□ -1.42
PTCD2-202ENST00000380639 PLCD4Q9BRC7 762 aa6.19□□□□□ -1.42
PTCD2-202ENST00000380639 PLCB2Q00722 1185 aa6.19□□□□□ -1.42
PTCD2-202ENST00000380639 NOM1Q5C9Z4 860 aaKnown RBP6.19□□□□□ -1.42
PTCD2-202ENST00000380639 KIAA2012Q0VF49 1180 aa6.17□□□□□ -1.42
PTCD2-202ENST00000380639 CCAR1Q8IX12 1150 aaKnown RBP6.17□□□□□ -1.42
PTCD2-202ENST00000380639 PSMD1Q99460 953 aa6.17□□□□□ -1.42
PTCD2-202ENST00000380639 OS9Q13438 667 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-202ENST00000380639 SSR1P43307 286 aaKnown RBP6.16□□□□□ -1.42
PTCD2-202ENST00000380639 HSP90B1P14625 803 aaKnown RBP6.15□□□□□ -1.42
PTCD2-202ENST00000380639 BECN1Q14457 450 aa6.15□□□□□ -1.42
PTCD2-202ENST00000380639 TEX35Q5T0J7 233 aa6.15□□□□□ -1.42
PTCD2-202ENST00000380639 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.42
PTCD2-202ENST00000380639 DDRGK1Q96HY6 314 aa6.15□□□□□ -1.42
PTCD2-202ENST00000380639 PHF14O94880 888 aa6.15□□□□□ -1.43
PTCD2-202ENST00000380639 DRC7Q8IY82 874 aa6.14□□□□□ -1.43
PTCD2-202ENST00000380639 CLSTN1O94985 981 aa6.14□□□□□ -1.43
PTCD2-202ENST00000380639 MPHOSPH10O00566 681 aaKnown RBP6.14□□□□□ -1.43
PTCD2-202ENST00000380639 RDXP35241 583 aaKnown RBP6.14□□□□□ -1.43
PTCD2-202ENST00000380639 GPS2Q13227 327 aa6.14□□□□□ -1.43
PTCD2-202ENST00000380639 CHMP3Q9Y3E7 222 aa6.14□□□□□ -1.43
PTCD2-202ENST00000380639 ZRSR2Q15696 482 aaKnown RBP6.13□□□□□ -1.43
PTCD2-202ENST00000380639 CASC1Q6TDU7 716 aa6.13□□□□□ -1.43
PTCD2-202ENST00000380639 PDCL3Q9H2J4 239 aa6.13□□□□□ -1.43
PTCD2-202ENST00000380639 USP8P40818 1118 aa6.13□□□□□ -1.43
PTCD2-202ENST00000380639 CCDC191Q8NCU4 936 aa6.12□□□□□ -1.43
PTCD2-202ENST00000380639 HMGN5P82970 282 aaKnown RBP6.12□□□□□ -1.43
PTCD2-202ENST00000380639 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
PTCD2-202ENST00000380639 HMMRO75330 724 aa6.12□□□□□ -1.43
PTCD2-202ENST00000380639 ISY1Q9ULR0 285 aaKnown RBP6.11□□□□□ -1.43
PTCD2-202ENST00000380639 TCHPQ9BT92 498 aa6.11□□□□□ -1.43
PTCD2-202ENST00000380639 VGFO15240 615 aaPredicted RBP6.11□□□□□ -1.43
PTCD2-202ENST00000380639 CHIC1Q5VXU3 224 aa6.11□□□□□ -1.43
PTCD2-202ENST00000380639 RASSF8Q8NHQ8 419 aa6.11□□□□□ -1.43
PTCD2-202ENST00000380639 MNS1Q8NEH6 495 aa6.09□□□□□ -1.43
PTCD2-202ENST00000380639 SUDS3Q9H7L9 328 aaPredicted RBP6.09□□□□□ -1.43
PTCD2-202ENST00000380639 RBM25P49756 843 aaKnown RBP6.09□□□□□ -1.44
PTCD2-202ENST00000380639 CC2D1BQ5T0F9 858 aaKnown RBP6.08□□□□□ -1.44
PTCD2-202ENST00000380639 TAF3Q5VWG9 929 aa6.08□□□□□ -1.44
PTCD2-202ENST00000380639 MAPK8IP2Q13387 824 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-202ENST00000380639 RSPH4AQ5TD94 716 aa6.08□□□□□ -1.44
PTCD2-202ENST00000380639 RSPH6AQ9H0K4 717 aa6.08□□□□□ -1.44
PTCD2-202ENST00000380639 FKBP8Q14318 412 aa6.07□□□□□ -1.44
PTCD2-202ENST00000380639 NEXNQ0ZGT2 675 aa6.07□□□□□ -1.44
PTCD2-202ENST00000380639 AK7Q96M32 723 aa6.07□□□□□ -1.44
PTCD2-202ENST00000380639 ACIN1Q9UKV3 1341 aaKnown RBP6.06□□□□□ -1.44
PTCD2-202ENST00000380639 CCDC175P0C221 793 aa6.06□□□□□ -1.44
PTCD2-202ENST00000380639 AEBP1Q8IUX7 1158 aa6.06□□□□□ -1.44
PTCD2-202ENST00000380639 WWC1Q8IX03 1113 aa6.06□□□□□ -1.44
PTCD2-202ENST00000380639 TIMELESSQ9UNS1 1208 aa6.06□□□□□ -1.44
PTCD2-202ENST00000380639 HMGB1P1B2RPK0 211 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-202ENST00000380639 FYB1O15117 783 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 KIF20AO95235 890 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 PLPPR3Q6T4P5 718 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 CCDC66A2RUB6 948 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 GIMAP7Q8NHV1 300 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 PAIP2Q9BPZ3 127 aaKnown RBP6.05□□□□□ -1.44
PTCD2-202ENST00000380639 PIK3R5Q8WYR1 880 aa6.05□□□□□ -1.44
PTCD2-202ENST00000380639 TRIM63Q969Q1 353 aa6.04□□□□□ -1.44
PTCD2-202ENST00000380639 CREBRFQ8IUR6 639 aa6.04□□□□□ -1.44
PTCD2-202ENST00000380639 PDIA4P13667 645 aaKnown RBP6.04□□□□□ -1.44
PTCD2-202ENST00000380639 INCENPQ9NQS7 918 aa6.03□□□□□ -1.44
PTCD2-202ENST00000380639 WDR78Q5VTH9 848 aa6.03□□□□□ -1.44
PTCD2-202ENST00000380639 KRI1Q8N9T8 703 aaKnown RBP6.03□□□□□ -1.44
PTCD2-202ENST00000380639 TMCO5BA8MYB1 307 aa6.03□□□□□ -1.44
PTCD2-202ENST00000380639 H0YHG0 523 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 FLIIQ13045 1269 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 GOLGA6L9A6NEM1 432 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 ARGLU1Q9NWB6 273 aaPredicted RBP6.02□□□□□ -1.45
PTCD2-202ENST00000380639 DZIP1Q86YF9 867 aaKnown RBP6.02□□□□□ -1.45
PTCD2-202ENST00000380639 DNAI2Q9GZS0 605 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 CWC15Q9P013 229 aaKnown RBP6.02□□□□□ -1.45
PTCD2-202ENST00000380639 DCTN1Q14203 1278 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 TNNT1P13805 278 aa6.02□□□□□ -1.45
PTCD2-202ENST00000380639 SOGA3Q5TF21 947 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms