RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
DSP-201ENST00000379802 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
DSP-201ENST00000379802 NBR1Q14596 966 aa13.42□□□□□ -0.26
DSP-201ENST00000379802 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
DSP-201ENST00000379802 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
DSP-201ENST00000379802 FKBP8Q14318 412 aa13.39□□□□□ -0.27
DSP-201ENST00000379802 NRDCO43847 1150 aa13.38□□□□□ -0.27
DSP-201ENST00000379802 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
DSP-201ENST00000379802 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
DSP-201ENST00000379802 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
DSP-201ENST00000379802 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
DSP-201ENST00000379802 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
DSP-201ENST00000379802 TSPY4P0CV99 314 aa13.35□□□□□ -0.27
DSP-201ENST00000379802 TSPY10P0CW01 314 aa13.35□□□□□ -0.27
DSP-201ENST00000379802 FGD1P98174 961 aa13.34□□□□□ -0.27
DSP-201ENST00000379802 CFAP53Q96M91 514 aa13.34□□□□□ -0.27
DSP-201ENST00000379802 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
DSP-201ENST00000379802 L1TD1Q5T7N2 865 aaKnown RBP13.32□□□□□ -0.28
DSP-201ENST00000379802 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
DSP-201ENST00000379802 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
DSP-201ENST00000379802 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
DSP-201ENST00000379802 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
DSP-201ENST00000379802 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
DSP-201ENST00000379802 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.28
DSP-201ENST00000379802 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.28
DSP-201ENST00000379802 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.28
DSP-201ENST00000379802 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
DSP-201ENST00000379802 PRM3Q9NNZ6 103 aa13.27□□□□□ -0.29
DSP-201ENST00000379802 KCNJ4P48050 445 aa13.27□□□□□ -0.29
DSP-201ENST00000379802 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
DSP-201ENST00000379802 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
DSP-201ENST00000379802 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
DSP-201ENST00000379802 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
DSP-201ENST00000379802 NAP1L2Q9ULW6 460 aaPredicted RBP13.25□□□□□ -0.29
DSP-201ENST00000379802 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
DSP-201ENST00000379802 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
DSP-201ENST00000379802 CHAF1AQ13111 956 aaPredicted RBP13.25□□□□□ -0.29
DSP-201ENST00000379802 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
DSP-201ENST00000379802 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
DSP-201ENST00000379802 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
DSP-201ENST00000379802 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
DSP-201ENST00000379802 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
DSP-201ENST00000379802 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
DSP-201ENST00000379802 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
DSP-201ENST00000379802 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
DSP-201ENST00000379802 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
DSP-201ENST00000379802 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
DSP-201ENST00000379802 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
DSP-201ENST00000379802 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
DSP-201ENST00000379802 POGKQ9P215 609 aa13.15□□□□□ -0.3
DSP-201ENST00000379802 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
DSP-201ENST00000379802 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.31
DSP-201ENST00000379802 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
DSP-201ENST00000379802 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
DSP-201ENST00000379802 MS4A1P11836 297 aa13.13□□□□□ -0.31
DSP-201ENST00000379802 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
DSP-201ENST00000379802 MCCP23508 829 aa13.12□□□□□ -0.31
DSP-201ENST00000379802 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
DSP-201ENST00000379802 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
DSP-201ENST00000379802 NAP1L5Q96NT1 182 aaPredicted RBP13.11□□□□□ -0.31
DSP-201ENST00000379802 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
DSP-201ENST00000379802 KANK1Q14678 1352 aa13.07□□□□□ -0.32
DSP-201ENST00000379802 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
DSP-201ENST00000379802 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
DSP-201ENST00000379802 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
DSP-201ENST00000379802 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
DSP-201ENST00000379802 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
DSP-201ENST00000379802 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
DSP-201ENST00000379802 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
DSP-201ENST00000379802 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
DSP-201ENST00000379802 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
DSP-201ENST00000379802 RGL3Q3MIN7 710 aa13.02□□□□□ -0.32
DSP-201ENST00000379802 MSNP26038 577 aaKnown RBP13.02□□□□□ -0.33
DSP-201ENST00000379802 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
DSP-201ENST00000379802 RRP7BPQ9NSQ0 103 aa13.01□□□□□ -0.33
DSP-201ENST00000379802 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
DSP-201ENST00000379802 G3V3G9 751 aa12.99□□□□□ -0.33
DSP-201ENST00000379802 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
DSP-201ENST00000379802 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
DSP-201ENST00000379802 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
DSP-201ENST00000379802 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
DSP-201ENST00000379802 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
DSP-201ENST00000379802 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
DSP-201ENST00000379802 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
DSP-201ENST00000379802 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
DSP-201ENST00000379802 CLIP1P30622 1438 aa12.98□□□□□ -0.33
DSP-201ENST00000379802 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
DSP-201ENST00000379802 GOLGA6L1Q8N7Z2 621 aa12.97□□□□□ -0.33
DSP-201ENST00000379802 RGS3P49796 1198 aa12.97□□□□□ -0.33
DSP-201ENST00000379802 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
DSP-201ENST00000379802 TPM4P67936 248 aa12.96□□□□□ -0.33
DSP-201ENST00000379802 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
DSP-201ENST00000379802 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
DSP-201ENST00000379802 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
DSP-201ENST00000379802 PDE4CQ08493 712 aa12.93□□□□□ -0.34
DSP-201ENST00000379802 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
DSP-201ENST00000379802 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
DSP-201ENST00000379802 PTMSP20962 102 aa12.93□□□□□ -0.34
DSP-201ENST00000379802 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
DSP-201ENST00000379802 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms