RNA–Protein interactions for RNA: ENST00000378623.5

LRP4-201, Transcript of LDL receptor related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP4, Length 8,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-201ENST00000378623 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
LRP4-201ENST00000378623 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
LRP4-201ENST00000378623 TRIM44Q96DX7 344 aaPredicted RBP22.83■■□□□ 1.24
LRP4-201ENST00000378623 HIRIP3Q9BW71 556 aaPredicted RBP22.8■■□□□ 1.24
LRP4-201ENST00000378623 ZRSR1Q15695 479 aaKnown RBP22.78■■□□□ 1.24
LRP4-201ENST00000378623 DNTTIP2Q5QJE6 756 aaKnown RBP22.76■■□□□ 1.23
LRP4-201ENST00000378623 NPHP1O15259 732 aa22.76■■□□□ 1.23
LRP4-201ENST00000378623 PTMAP06454 111 aaKnown RBP22.75■■□□□ 1.23
LRP4-201ENST00000378623 MRS2Q9HD23 443 aa22.73■■□□□ 1.23
LRP4-201ENST00000378623 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
LRP4-201ENST00000378623 PPM1GO15355 546 aaPredicted RBP22.72■■□□□ 1.23
LRP4-201ENST00000378623 LAS1LQ9Y4W2 734 aaKnown RBP22.67■■□□□ 1.22
LRP4-201ENST00000378623 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
LRP4-201ENST00000378623 PLCB2Q00722 1185 aa22.66■■□□□ 1.22
LRP4-201ENST00000378623 KCNH8Q96L42 1107 aa22.65■■□□□ 1.22
LRP4-201ENST00000378623 BECN1Q14457 450 aa22.65■■□□□ 1.22
LRP4-201ENST00000378623 CLSTN1O94985 981 aa22.64■■□□□ 1.21
LRP4-201ENST00000378623 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
LRP4-201ENST00000378623 NAP1L2Q9ULW6 460 aaPredicted RBP22.6■■□□□ 1.21
LRP4-201ENST00000378623 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
LRP4-201ENST00000378623 AMER1Q5JTC6 1135 aaPredicted RBP22.57■■□□□ 1.2
LRP4-201ENST00000378623 CASC1Q6TDU7 716 aa22.56■■□□□ 1.2
LRP4-201ENST00000378623 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
LRP4-201ENST00000378623 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
LRP4-201ENST00000378623 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
LRP4-201ENST00000378623 RTN4Q9NQC3 1192 aaKnown RBP22.53■■□□□ 1.2
LRP4-201ENST00000378623 DDRGK1Q96HY6 314 aa22.53■■□□□ 1.2
LRP4-201ENST00000378623 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
LRP4-201ENST00000378623 FTSJ3Q8IY81 847 aaKnown RBP22.52■■□□□ 1.2
LRP4-201ENST00000378623 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
LRP4-201ENST00000378623 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
LRP4-201ENST00000378623 NEUROD2Q15784 382 aa22.5■■□□□ 1.19
LRP4-201ENST00000378623 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
LRP4-201ENST00000378623 NAP1L5Q96NT1 182 aaPredicted RBP22.49■■□□□ 1.19
LRP4-201ENST00000378623 FGD1P98174 961 aa22.46■■□□□ 1.19
LRP4-201ENST00000378623 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
LRP4-201ENST00000378623 OS9Q13438 667 aaPredicted RBP22.44■■□□□ 1.18
LRP4-201ENST00000378623 ISY1Q9ULR0 285 aaKnown RBP22.44■■□□□ 1.18
LRP4-201ENST00000378623 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
LRP4-201ENST00000378623 KCNJ4P48050 445 aa22.38■■□□□ 1.17
LRP4-201ENST00000378623 HSP90AB1P08238 724 aaKnown RBP22.34■■□□□ 1.17
LRP4-201ENST00000378623 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
LRP4-201ENST00000378623 FRAT1Q92837 279 aaPredicted RBP22.34■■□□□ 1.17
LRP4-201ENST00000378623 ANP32EQ9BTT0 268 aa22.34■■□□□ 1.17
LRP4-201ENST00000378623 MIER1Q8N108 512 aa22.33■■□□□ 1.17
LRP4-201ENST00000378623 RGS3P49796 1198 aa22.33■■□□□ 1.16
LRP4-201ENST00000378623 GOLGA6L6A8MZA4 724 aa22.32■■□□□ 1.16
LRP4-201ENST00000378623 SOX12O15370 315 aa22.31■■□□□ 1.16
LRP4-201ENST00000378623 PRM3Q9NNZ6 103 aa22.31■■□□□ 1.16
LRP4-201ENST00000378623 EIF4G2P78344 907 aaKnown RBP eCLIP22.3■■□□□ 1.16
LRP4-201ENST00000378623 MTUS2Q5JR59 1369 aa22.3■■□□□ 1.16
LRP4-201ENST00000378623 SPRYD3Q8NCJ5 442 aa22.28■■□□□ 1.16
LRP4-201ENST00000378623 KNSTRNQ9Y448 316 aa22.28■■□□□ 1.16
LRP4-201ENST00000378623 MAPK8IP3Q9UPT6 1336 aa22.27■■□□□ 1.16
LRP4-201ENST00000378623 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
LRP4-201ENST00000378623 MLECQ14165 292 aa22.24■■□□□ 1.15
LRP4-201ENST00000378623 DRC7Q8IY82 874 aa22.24■■□□□ 1.15
LRP4-201ENST00000378623 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
LRP4-201ENST00000378623 U2SURPO15042 1029 aaKnown RBP22.22■■□□□ 1.15
LRP4-201ENST00000378623 PDE4CQ08493 712 aa22.22■■□□□ 1.15
LRP4-201ENST00000378623 POGKQ9P215 609 aa22.21■■□□□ 1.15
LRP4-201ENST00000378623 GOLGA6L4A6NEF3 574 aa22.2■■□□□ 1.14
LRP4-201ENST00000378623 CC2D1BQ5T0F9 858 aaKnown RBP22.2■■□□□ 1.14
LRP4-201ENST00000378623 ANO8Q9HCE9 1232 aaPredicted RBP22.17■■□□□ 1.14
LRP4-201ENST00000378623 ARID3AQ99856 593 aa22.16■■□□□ 1.14
LRP4-201ENST00000378623 GNL2Q13823 731 aaKnown RBP22.14■■□□□ 1.14
LRP4-201ENST00000378623 NRDCO43847 1150 aa22.13■■□□□ 1.13
LRP4-201ENST00000378623 NOC3LQ8WTT2 800 aaKnown RBP22.11■■□□□ 1.13
LRP4-201ENST00000378623 CHAF1AQ13111 956 aaPredicted RBP22.1■■□□□ 1.13
LRP4-201ENST00000378623 APBB1O00213 710 aa22.09■■□□□ 1.13
LRP4-201ENST00000378623 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
LRP4-201ENST00000378623 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
LRP4-201ENST00000378623 ZNF330Q9Y3S2 320 aaPredicted RBP22.08■■□□□ 1.13
LRP4-201ENST00000378623 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
LRP4-201ENST00000378623 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.05■■□□□ 1.12
LRP4-201ENST00000378623 MSNP26038 577 aaKnown RBP22.04■■□□□ 1.12
LRP4-201ENST00000378623 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
LRP4-201ENST00000378623 KIAA2012Q0VF49 1180 aa22.04■■□□□ 1.12
LRP4-201ENST00000378623 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
LRP4-201ENST00000378623 HSCBQ8IWL3 235 aa22.02■■□□□ 1.12
LRP4-201ENST00000378623 CDCA8Q53HL2 280 aa22.02■■□□□ 1.12
LRP4-201ENST00000378623 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
LRP4-201ENST00000378623 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
LRP4-201ENST00000378623 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
LRP4-201ENST00000378623 B4GALNT3Q6L9W6 998 aa21.96■■□□□ 1.11
LRP4-201ENST00000378623 MCCP23508 829 aa21.96■■□□□ 1.11
LRP4-201ENST00000378623 PAK3O75914 559 aaPredicted RBP21.96■■□□□ 1.11
LRP4-201ENST00000378623 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
LRP4-201ENST00000378623 CREBRFQ8IUR6 639 aa21.93■■□□□ 1.1
LRP4-201ENST00000378623 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
LRP4-201ENST00000378623 A0A0U1RQG5 324 aaPredicted RBP21.91■■□□□ 1.1
LRP4-201ENST00000378623 L1TD1Q5T7N2 865 aaKnown RBP21.9■■□□□ 1.1
LRP4-201ENST00000378623 RTF1Q92541 710 aaKnown RBP21.89■■□□□ 1.1
LRP4-201ENST00000378623 HSP90B1P14625 803 aaKnown RBP21.89■■□□□ 1.1
LRP4-201ENST00000378623 GZF1Q9H116 711 aaPredicted RBP21.88■■□□□ 1.09
LRP4-201ENST00000378623 CHMP4BQ9H444 224 aaKnown RBP21.88■■□□□ 1.09
LRP4-201ENST00000378623 CFDP1Q9UEE9 299 aaPredicted RBP21.87■■□□□ 1.09
LRP4-201ENST00000378623 CHMP3Q9Y3E7 222 aa21.87■■□□□ 1.09
LRP4-201ENST00000378623 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
LRP4-201ENST00000378623 KIAA1211Q6ZU35 1233 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms