RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
CUBN-201ENST00000377823 LHX8Q68G74 356 aa9.9□□□□□ -0.82
CUBN-201ENST00000377823 CHADLQ6NUI6 762 aa9.9□□□□□ -0.82
CUBN-201ENST00000377823 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
CUBN-201ENST00000377823 PLSCR2Q9NRY7 297 aa9.88□□□□□ -0.83
CUBN-201ENST00000377823 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
CUBN-201ENST00000377823 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
CUBN-201ENST00000377823 EVX2Q03828 476 aa9.84□□□□□ -0.83
CUBN-201ENST00000377823 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
CUBN-201ENST00000377823 PRKAR2AP13861 404 aaKnown RBP9.83□□□□□ -0.84
CUBN-201ENST00000377823 RNF25Q96BH1 459 aaPredicted RBP9.83□□□□□ -0.84
CUBN-201ENST00000377823 FARP1Q9Y4F1 1045 aaPredicted RBP9.83□□□□□ -0.84
CUBN-201ENST00000377823 CHRM1P11229 460 aaPredicted RBP9.8□□□□□ -0.84
CUBN-201ENST00000377823 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
CUBN-201ENST00000377823 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
CUBN-201ENST00000377823 PYGBP11216 843 aa9.77□□□□□ -0.85
CUBN-201ENST00000377823 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
CUBN-201ENST00000377823 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
CUBN-201ENST00000377823 PAXIP1Q6ZW49 1069 aaPredicted RBP9.76□□□□□ -0.85
CUBN-201ENST00000377823 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
CUBN-201ENST00000377823 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
CUBN-201ENST00000377823 VGFO15240 615 aaPredicted RBP9.73□□□□□ -0.85
CUBN-201ENST00000377823 SPRYD3Q8NCJ5 442 aa9.72□□□□□ -0.85
CUBN-201ENST00000377823 STK25O00506 426 aa9.69□□□□□ -0.86
CUBN-201ENST00000377823 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
CUBN-201ENST00000377823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
CUBN-201ENST00000377823 GABBR2O75899 941 aa9.66□□□□□ -0.86
CUBN-201ENST00000377823 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
CUBN-201ENST00000377823 SGIP1Q9BQI5 828 aa9.66□□□□□ -0.86
CUBN-201ENST00000377823 DNAJC5Q9H3Z4 198 aa9.66□□□□□ -0.86
CUBN-201ENST00000377823 CCDC61Q9Y6R9 512 aa9.66□□□□□ -0.86
CUBN-201ENST00000377823 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
CUBN-201ENST00000377823 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
CUBN-201ENST00000377823 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
CUBN-201ENST00000377823 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
CUBN-201ENST00000377823 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
CUBN-201ENST00000377823 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
CUBN-201ENST00000377823 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
CUBN-201ENST00000377823 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
CUBN-201ENST00000377823 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
CUBN-201ENST00000377823 CD44P16070 742 aaKnown RBP9.57□□□□□ -0.88
CUBN-201ENST00000377823 PDAP1Q13442 181 aaKnown RBP9.57□□□□□ -0.88
CUBN-201ENST00000377823 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
CUBN-201ENST00000377823 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
CUBN-201ENST00000377823 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
CUBN-201ENST00000377823 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
CUBN-201ENST00000377823 MAP3K13O43283 966 aa9.55□□□□□ -0.88
CUBN-201ENST00000377823 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
CUBN-201ENST00000377823 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
CUBN-201ENST00000377823 PSEN1P49768 467 aa9.53□□□□□ -0.88
CUBN-201ENST00000377823 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
CUBN-201ENST00000377823 RYDENQ9NUL5 291 aaKnown RBP9.51□□□□□ -0.89
CUBN-201ENST00000377823 BCANQ96GW7 911 aa9.43□□□□□ -0.9
CUBN-201ENST00000377823 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
CUBN-201ENST00000377823 CLCN6P51797 869 aa9.42□□□□□ -0.9
CUBN-201ENST00000377823 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
CUBN-201ENST00000377823 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
CUBN-201ENST00000377823 MFRPQ9BY79 579 aa9.4□□□□□ -0.9
CUBN-201ENST00000377823 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
CUBN-201ENST00000377823 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
CUBN-201ENST00000377823 SOX12O15370 315 aa9.37□□□□□ -0.91
CUBN-201ENST00000377823 TMEM106CQ9BVX2 250 aa9.36□□□□□ -0.91
CUBN-201ENST00000377823 POTEMA6NI47 508 aa9.35□□□□□ -0.91
CUBN-201ENST00000377823 NLRP6P59044 892 aa9.35□□□□□ -0.91
CUBN-201ENST00000377823 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
CUBN-201ENST00000377823 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
CUBN-201ENST00000377823 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
CUBN-201ENST00000377823 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
CUBN-201ENST00000377823 PPP1R37O75864 691 aa9.3□□□□□ -0.92
CUBN-201ENST00000377823 TIE1P35590 1138 aa9.3□□□□□ -0.92
CUBN-201ENST00000377823 CADPS2Q86UW7 1296 aa9.29□□□□□ -0.92
CUBN-201ENST00000377823 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
CUBN-201ENST00000377823 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
CUBN-201ENST00000377823 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
CUBN-201ENST00000377823 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
CUBN-201ENST00000377823 BMP2KQ9NSY1 1161 aaPredicted RBP9.26□□□□□ -0.93
CUBN-201ENST00000377823 NBR1Q14596 966 aa9.25□□□□□ -0.93
CUBN-201ENST00000377823 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
CUBN-201ENST00000377823 DCBLD2Q96PD2 775 aa9.25□□□□□ -0.93
CUBN-201ENST00000377823 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
CUBN-201ENST00000377823 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
CUBN-201ENST00000377823 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
CUBN-201ENST00000377823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
CUBN-201ENST00000377823 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
CUBN-201ENST00000377823 ATN1P54259 1190 aaPredicted RBP9.17□□□□□ -0.94
CUBN-201ENST00000377823 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
CUBN-201ENST00000377823 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
CUBN-201ENST00000377823 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
CUBN-201ENST00000377823 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
CUBN-201ENST00000377823 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
CUBN-201ENST00000377823 ASTLQ6HA08 431 aaPredicted RBP9.13□□□□□ -0.95
CUBN-201ENST00000377823 PDE4AP27815 886 aa9.12□□□□□ -0.95
CUBN-201ENST00000377823 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
CUBN-201ENST00000377823 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
CUBN-201ENST00000377823 DPY19L2Q6NUT2 758 aa9.11□□□□□ -0.95
CUBN-201ENST00000377823 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
CUBN-201ENST00000377823 E2F4Q16254 413 aa9.09□□□□□ -0.95
CUBN-201ENST00000377823 IER5LQ5T953 404 aa9.09□□□□□ -0.95
CUBN-201ENST00000377823 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
CUBN-201ENST00000377823 IRX5P78411 483 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms