RNA–Protein interactions for RNA: ENST00000376935.4

SMIM13-201, Transcript of small integral membrane protein 13, humanhuman

TSL 5

Gene SMIM13, Length 1,251 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-201ENST00000376935 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
SMIM13-201ENST00000376935 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
SMIM13-201ENST00000376935 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
SMIM13-201ENST00000376935 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
SMIM13-201ENST00000376935 PKD2Q13563 968 aa12.27□□□□□ -0.45
SMIM13-201ENST00000376935 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
SMIM13-201ENST00000376935 PROM2Q8N271 834 aa12.26□□□□□ -0.45
SMIM13-201ENST00000376935 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
SMIM13-201ENST00000376935 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
SMIM13-201ENST00000376935 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
SMIM13-201ENST00000376935 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
SMIM13-201ENST00000376935 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
SMIM13-201ENST00000376935 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
SMIM13-201ENST00000376935 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
SMIM13-201ENST00000376935 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
SMIM13-201ENST00000376935 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
SMIM13-201ENST00000376935 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
SMIM13-201ENST00000376935 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
SMIM13-201ENST00000376935 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMIM13-201ENST00000376935 CFAP44Q96MT7 982 aa12.03□□□□□ -0.48
SMIM13-201ENST00000376935 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
SMIM13-201ENST00000376935 METRNQ9UJH8 293 aa12□□□□□ -0.49
SMIM13-201ENST00000376935 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
SMIM13-201ENST00000376935 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
SMIM13-201ENST00000376935 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
SMIM13-201ENST00000376935 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
SMIM13-201ENST00000376935 TULP1O00294 542 aaPredicted RBP11.93□□□□□ -0.5
SMIM13-201ENST00000376935 ATMINO43313 823 aaPredicted RBP11.93□□□□□ -0.5
SMIM13-201ENST00000376935 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
SMIM13-201ENST00000376935 C7P10643 843 aa11.9□□□□□ -0.5
SMIM13-201ENST00000376935 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
SMIM13-201ENST00000376935 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
SMIM13-201ENST00000376935 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
SMIM13-201ENST00000376935 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
SMIM13-201ENST00000376935 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
SMIM13-201ENST00000376935 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
SMIM13-201ENST00000376935 ARXQ96QS3 562 aa11.85□□□□□ -0.51
SMIM13-201ENST00000376935 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
SMIM13-201ENST00000376935 RGL2O15211 777 aa11.84□□□□□ -0.51
SMIM13-201ENST00000376935 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
SMIM13-201ENST00000376935 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
SMIM13-201ENST00000376935 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
SMIM13-201ENST00000376935 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
SMIM13-201ENST00000376935 NBR1Q14596 966 aa11.79□□□□□ -0.52
SMIM13-201ENST00000376935 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
SMIM13-201ENST00000376935 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
SMIM13-201ENST00000376935 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
SMIM13-201ENST00000376935 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
SMIM13-201ENST00000376935 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
SMIM13-201ENST00000376935 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
SMIM13-201ENST00000376935 TRPC6Q9Y210 931 aa11.66□□□□□ -0.54
SMIM13-201ENST00000376935 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
SMIM13-201ENST00000376935 TMEM132AQ24JP5 1023 aa11.61□□□□□ -0.55
SMIM13-201ENST00000376935 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
SMIM13-201ENST00000376935 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
SMIM13-201ENST00000376935 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
SMIM13-201ENST00000376935 ST18O60284 1047 aa11.57□□□□□ -0.56
SMIM13-201ENST00000376935 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
SMIM13-201ENST00000376935 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
SMIM13-201ENST00000376935 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
SMIM13-201ENST00000376935 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
SMIM13-201ENST00000376935 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
SMIM13-201ENST00000376935 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
SMIM13-201ENST00000376935 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
SMIM13-201ENST00000376935 TIE1P35590 1138 aa11.49□□□□□ -0.57
SMIM13-201ENST00000376935 MIER1Q8N108 512 aa11.49□□□□□ -0.57
SMIM13-201ENST00000376935 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
SMIM13-201ENST00000376935 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
SMIM13-201ENST00000376935 MAP3K13O43283 966 aa11.45□□□□□ -0.58
SMIM13-201ENST00000376935 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
SMIM13-201ENST00000376935 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
SMIM13-201ENST00000376935 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
SMIM13-201ENST00000376935 SEC24BO95487 1268 aa11.41□□□□□ -0.58
SMIM13-201ENST00000376935 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
SMIM13-201ENST00000376935 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
SMIM13-201ENST00000376935 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
SMIM13-201ENST00000376935 IER5LQ5T953 404 aa11.34□□□□□ -0.59
SMIM13-201ENST00000376935 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
SMIM13-201ENST00000376935 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
SMIM13-201ENST00000376935 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
SMIM13-201ENST00000376935 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
SMIM13-201ENST00000376935 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
SMIM13-201ENST00000376935 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
SMIM13-201ENST00000376935 GSE1Q14687 1217 aa11.23□□□□□ -0.61
SMIM13-201ENST00000376935 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
SMIM13-201ENST00000376935 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
SMIM13-201ENST00000376935 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
SMIM13-201ENST00000376935 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
SMIM13-201ENST00000376935 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
SMIM13-201ENST00000376935 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
SMIM13-201ENST00000376935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMIM13-201ENST00000376935 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
SMIM13-201ENST00000376935 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
SMIM13-201ENST00000376935 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
SMIM13-201ENST00000376935 STK25O00506 426 aa11.17□□□□□ -0.62
SMIM13-201ENST00000376935 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
SMIM13-201ENST00000376935 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
SMIM13-201ENST00000376935 PLCG2P16885 1265 aa11.15□□□□□ -0.62
SMIM13-201ENST00000376935 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
SMIM13-201ENST00000376935 NUBP1P53384 320 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms