RNA–Protein interactions for RNA: ENST00000376007.8

PRRC2A-201, Transcript of proline rich coiled-coil 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRC2A, Length 6,861 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-201ENST00000376007 CHIC2Q9UKJ5 165 aa24.45■■□□□ 1.51
PRRC2A-201ENST00000376007 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
PRRC2A-201ENST00000376007 ANP32AP39687 249 aaKnown RBP24.42■■□□□ 1.5
PRRC2A-201ENST00000376007 CCDC9Q9Y3X0 531 aaKnown RBP24.41■■□□□ 1.5
PRRC2A-201ENST00000376007 POGKQ9P215 609 aa24.4■■□□□ 1.5
PRRC2A-201ENST00000376007 CFAP53Q96M91 514 aa24.39■■□□□ 1.49
PRRC2A-201ENST00000376007 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
PRRC2A-201ENST00000376007 MLECQ14165 292 aa24.35■■□□□ 1.49
PRRC2A-201ENST00000376007 NCBP3Q53F19 620 aaKnown RBP24.31■■□□□ 1.48
PRRC2A-201ENST00000376007 PPM1GO15355 546 aaPredicted RBP24.31■■□□□ 1.48
PRRC2A-201ENST00000376007 CLSTN1O94985 981 aa24.3■■□□□ 1.48
PRRC2A-201ENST00000376007 ZRSR1Q15695 479 aaKnown RBP24.29■■□□□ 1.48
PRRC2A-201ENST00000376007 CDCA8Q53HL2 280 aa24.26■■□□□ 1.47
PRRC2A-201ENST00000376007 ISY1Q9ULR0 285 aaKnown RBP24.25■■□□□ 1.47
PRRC2A-201ENST00000376007 SALL2Q9Y467 1007 aaPredicted RBP24.24■■□□□ 1.47
PRRC2A-201ENST00000376007 NCLP19338 710 aaKnown RBP24.23■■□□□ 1.47
PRRC2A-201ENST00000376007 KRI1Q8N9T8 703 aaKnown RBP24.22■■□□□ 1.47
PRRC2A-201ENST00000376007 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
PRRC2A-201ENST00000376007 CASC1Q6TDU7 716 aa24.19■■□□□ 1.46
PRRC2A-201ENST00000376007 G3V3G9 751 aa24.16■■□□□ 1.46
PRRC2A-201ENST00000376007 DCAF8Q5TAQ9 597 aa24.16■■□□□ 1.46
PRRC2A-201ENST00000376007 KANK1Q14678 1352 aa24.15■■□□□ 1.46
PRRC2A-201ENST00000376007 CSB-PGBD3P0DP91 1061 aa24.15■■□□□ 1.46
PRRC2A-201ENST00000376007 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
PRRC2A-201ENST00000376007 EIF5BO60841 1220 aaKnown RBP24.14■■□□□ 1.45
PRRC2A-201ENST00000376007 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
PRRC2A-201ENST00000376007 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
PRRC2A-201ENST00000376007 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
PRRC2A-201ENST00000376007 MEX3CQ5U5Q3 659 aaKnown RBP24.12■■□□□ 1.45
PRRC2A-201ENST00000376007 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
PRRC2A-201ENST00000376007 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
PRRC2A-201ENST00000376007 FOXD1Q16676 465 aa24.1■■□□□ 1.45
PRRC2A-201ENST00000376007 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
PRRC2A-201ENST00000376007 PNNQ9H307 717 aaKnown RBP24.06■■□□□ 1.44
PRRC2A-201ENST00000376007 RGL3Q3MIN7 710 aa24.05■■□□□ 1.44
PRRC2A-201ENST00000376007 LAS1LQ9Y4W2 734 aaKnown RBP24.03■■□□□ 1.44
PRRC2A-201ENST00000376007 FGD1P98174 961 aa24■■□□□ 1.43
PRRC2A-201ENST00000376007 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
PRRC2A-201ENST00000376007 TAOK2Q9UL54 1235 aa23.97■■□□□ 1.43
PRRC2A-201ENST00000376007 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
PRRC2A-201ENST00000376007 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
PRRC2A-201ENST00000376007 PRM3Q9NNZ6 103 aa23.95■■□□□ 1.42
PRRC2A-201ENST00000376007 CHMP4BQ9H444 224 aaKnown RBP23.94■■□□□ 1.42
PRRC2A-201ENST00000376007 EID1Q9Y6B2 187 aa23.93■■□□□ 1.42
PRRC2A-201ENST00000376007 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
PRRC2A-201ENST00000376007 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
PRRC2A-201ENST00000376007 FTSJ3Q8IY81 847 aaKnown RBP23.9■■□□□ 1.42
PRRC2A-201ENST00000376007 NAP1L2Q9ULW6 460 aaPredicted RBP23.9■■□□□ 1.42
PRRC2A-201ENST00000376007 SOX12O15370 315 aa23.9■■□□□ 1.42
PRRC2A-201ENST00000376007 ZNF330Q9Y3S2 320 aaPredicted RBP23.89■■□□□ 1.41
PRRC2A-201ENST00000376007 MSH5O43196 834 aa23.88■■□□□ 1.41
PRRC2A-201ENST00000376007 KCNJ4P48050 445 aa23.87■■□□□ 1.41
PRRC2A-201ENST00000376007 RTF1Q92541 710 aaKnown RBP23.86■■□□□ 1.41
PRRC2A-201ENST00000376007 ANP32EQ9BTT0 268 aa23.85■■□□□ 1.41
PRRC2A-201ENST00000376007 GOLGA6L22H0YM25 854 aa23.85■■□□□ 1.41
PRRC2A-201ENST00000376007 SRPK2P78362 688 aaKnown RBP23.83■■□□□ 1.4
PRRC2A-201ENST00000376007 MRS2Q9HD23 443 aa23.82■■□□□ 1.4
PRRC2A-201ENST00000376007 CCDC136Q96JN2 1154 aa23.81■■□□□ 1.4
PRRC2A-201ENST00000376007 GOLGA6L6A8MZA4 724 aa23.78■■□□□ 1.4
PRRC2A-201ENST00000376007 GGT6Q6P531 493 aa23.77■■□□□ 1.4
PRRC2A-201ENST00000376007 U2SURPO15042 1029 aaKnown RBP23.77■■□□□ 1.4
PRRC2A-201ENST00000376007 TRIM44Q96DX7 344 aaPredicted RBP23.76■■□□□ 1.39
PRRC2A-201ENST00000376007 GTF2E1P29083 439 aaPredicted RBP23.76■■□□□ 1.39
PRRC2A-201ENST00000376007 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
PRRC2A-201ENST00000376007 BECN1Q14457 450 aa23.75■■□□□ 1.39
PRRC2A-201ENST00000376007 CLIP1P30622 1438 aa23.75■■□□□ 1.39
PRRC2A-201ENST00000376007 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
PRRC2A-201ENST00000376007 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
PRRC2A-201ENST00000376007 CWC22Q9HCG8 908 aaKnown RBP23.72■■□□□ 1.39
PRRC2A-201ENST00000376007 MS4A1P11836 297 aa23.71■■□□□ 1.39
PRRC2A-201ENST00000376007 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
PRRC2A-201ENST00000376007 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.7■■□□□ 1.38
PRRC2A-201ENST00000376007 FKBP8Q14318 412 aa23.69■■□□□ 1.38
PRRC2A-201ENST00000376007 CARD11Q9BXL7 1154 aa23.68■■□□□ 1.38
PRRC2A-201ENST00000376007 TAF7LQ5H9L4 462 aa23.68■■□□□ 1.38
PRRC2A-201ENST00000376007 GNL2Q13823 731 aaKnown RBP23.67■■□□□ 1.38
PRRC2A-201ENST00000376007 EVA1CP58658 441 aa23.67■■□□□ 1.38
PRRC2A-201ENST00000376007 NEUROD2Q15784 382 aa23.67■■□□□ 1.38
PRRC2A-201ENST00000376007 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
PRRC2A-201ENST00000376007 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
PRRC2A-201ENST00000376007 CCNB3Q8WWL7 1395 aa23.64■■□□□ 1.37
PRRC2A-201ENST00000376007 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
PRRC2A-201ENST00000376007 L1TD1Q5T7N2 865 aaKnown RBP23.62■■□□□ 1.37
PRRC2A-201ENST00000376007 TPRNQ4KMQ1 711 aa23.62■■□□□ 1.37
PRRC2A-201ENST00000376007 CTDP1Q9Y5B0 961 aaPredicted RBP23.62■■□□□ 1.37
PRRC2A-201ENST00000376007 NRDCO43847 1150 aa23.62■■□□□ 1.37
PRRC2A-201ENST00000376007 GORABQ5T7V8 394 aa23.61■■□□□ 1.37
PRRC2A-201ENST00000376007 STK26Q9P289 416 aa23.61■■□□□ 1.37
PRRC2A-201ENST00000376007 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
PRRC2A-201ENST00000376007 KIAA2012Q0VF49 1180 aa23.6■■□□□ 1.37
PRRC2A-201ENST00000376007 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
PRRC2A-201ENST00000376007 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
PRRC2A-201ENST00000376007 FRAT2O75474 233 aaPredicted RBP23.58■■□□□ 1.37
PRRC2A-201ENST00000376007 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.36
PRRC2A-201ENST00000376007 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.36
PRRC2A-201ENST00000376007 CHAF1AQ13111 956 aaPredicted RBP23.56■■□□□ 1.36
PRRC2A-201ENST00000376007 TRIM34Q9BYJ4 488 aa23.55■■□□□ 1.36
PRRC2A-201ENST00000376007 NGDNQ8NEJ9 315 aaKnown RBP23.54■■□□□ 1.36
PRRC2A-201ENST00000376007 MCCP23508 829 aa23.53■■□□□ 1.36
PRRC2A-201ENST00000376007 GOLGA6L4A6NEF3 574 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms