RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX30-201ENST00000374232 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
SNX30-201ENST00000374232 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
SNX30-201ENST00000374232 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
SNX30-201ENST00000374232 ARID4BQ4LE39 1312 aaPredicted RBP19.35■□□□□ 0.69
SNX30-201ENST00000374232 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
SNX30-201ENST00000374232 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
SNX30-201ENST00000374232 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
SNX30-201ENST00000374232 DNTTIP2Q5QJE6 756 aaKnown RBP19.28■□□□□ 0.68
SNX30-201ENST00000374232 NEUROD2Q15784 382 aa19.28■□□□□ 0.68
SNX30-201ENST00000374232 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
SNX30-201ENST00000374232 PTMAP06454 111 aaKnown RBP19.25■□□□□ 0.67
SNX30-201ENST00000374232 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
SNX30-201ENST00000374232 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
SNX30-201ENST00000374232 RGL3Q3MIN7 710 aa19.24■□□□□ 0.67
SNX30-201ENST00000374232 NAP1L5Q96NT1 182 aaPredicted RBP19.24■□□□□ 0.67
SNX30-201ENST00000374232 ARID3AQ99856 593 aa19.23■□□□□ 0.67
SNX30-201ENST00000374232 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX30-201ENST00000374232 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
SNX30-201ENST00000374232 RRP7BPQ9NSQ0 103 aa19.22■□□□□ 0.67
SNX30-201ENST00000374232 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
SNX30-201ENST00000374232 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
SNX30-201ENST00000374232 RGS3P49796 1198 aa19.16■□□□□ 0.66
SNX30-201ENST00000374232 NPHP1O15259 732 aa19.14■□□□□ 0.66
SNX30-201ENST00000374232 NAP1L2Q9ULW6 460 aaPredicted RBP19.12■□□□□ 0.65
SNX30-201ENST00000374232 ZRSR1Q15695 479 aaKnown RBP19.12■□□□□ 0.65
SNX30-201ENST00000374232 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
SNX30-201ENST00000374232 FRAT1Q92837 279 aaPredicted RBP19.08■□□□□ 0.65
SNX30-201ENST00000374232 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
SNX30-201ENST00000374232 BECN1Q14457 450 aa19.07■□□□□ 0.64
SNX30-201ENST00000374232 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
SNX30-201ENST00000374232 SOX12O15370 315 aa19.04■□□□□ 0.64
SNX30-201ENST00000374232 CLSTN1O94985 981 aa19.04■□□□□ 0.64
SNX30-201ENST00000374232 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
SNX30-201ENST00000374232 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.64
SNX30-201ENST00000374232 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
SNX30-201ENST00000374232 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
SNX30-201ENST00000374232 ERICH6BQ5W0A0 696 aa19■□□□□ 0.63
SNX30-201ENST00000374232 DDRGK1Q96HY6 314 aa19■□□□□ 0.63
SNX30-201ENST00000374232 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
SNX30-201ENST00000374232 GOLGA6L22H0YM25 854 aa18.98■□□□□ 0.63
SNX30-201ENST00000374232 ANO8Q9HCE9 1232 aaPredicted RBP18.97■□□□□ 0.63
SNX30-201ENST00000374232 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNX30-201ENST00000374232 HSP90AB1P08238 724 aaKnown RBP18.93■□□□□ 0.62
SNX30-201ENST00000374232 APBB1O00213 710 aa18.92■□□□□ 0.62
SNX30-201ENST00000374232 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
SNX30-201ENST00000374232 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
SNX30-201ENST00000374232 FGD1P98174 961 aa18.9■□□□□ 0.62
SNX30-201ENST00000374232 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
SNX30-201ENST00000374232 CASC1Q6TDU7 716 aa18.9■□□□□ 0.62
SNX30-201ENST00000374232 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
SNX30-201ENST00000374232 PDE4CQ08493 712 aa18.88■□□□□ 0.61
SNX30-201ENST00000374232 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
SNX30-201ENST00000374232 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
SNX30-201ENST00000374232 GOLGA2Q08379 1002 aa18.87■□□□□ 0.61
SNX30-201ENST00000374232 GZF1Q9H116 711 aaPredicted RBP18.86■□□□□ 0.61
SNX30-201ENST00000374232 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
SNX30-201ENST00000374232 MTUS2Q5JR59 1369 aa18.85■□□□□ 0.61
SNX30-201ENST00000374232 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNX30-201ENST00000374232 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
SNX30-201ENST00000374232 KCNJ4P48050 445 aa18.84■□□□□ 0.61
SNX30-201ENST00000374232 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
SNX30-201ENST00000374232 DRC7Q8IY82 874 aa18.81■□□□□ 0.6
SNX30-201ENST00000374232 DEKP35659 375 aaKnown RBP18.8■□□□□ 0.6
SNX30-201ENST00000374232 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
SNX30-201ENST00000374232 PRM3Q9NNZ6 103 aa18.77■□□□□ 0.59
SNX30-201ENST00000374232 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
SNX30-201ENST00000374232 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
SNX30-201ENST00000374232 CFAP53Q96M91 514 aa18.73■□□□□ 0.59
SNX30-201ENST00000374232 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
SNX30-201ENST00000374232 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
SNX30-201ENST00000374232 MLECQ14165 292 aa18.7■□□□□ 0.58
SNX30-201ENST00000374232 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
SNX30-201ENST00000374232 POGKQ9P215 609 aa18.69■□□□□ 0.58
SNX30-201ENST00000374232 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
SNX30-201ENST00000374232 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
SNX30-201ENST00000374232 GOLGA6L6A8MZA4 724 aa18.67■□□□□ 0.58
SNX30-201ENST00000374232 MSNP26038 577 aaKnown RBP18.66■□□□□ 0.58
SNX30-201ENST00000374232 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
SNX30-201ENST00000374232 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
SNX30-201ENST00000374232 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
SNX30-201ENST00000374232 FOXD4L5Q5VV16 416 aaPredicted RBP18.64■□□□□ 0.57
SNX30-201ENST00000374232 FOXD4L4Q8WXT5 416 aaPredicted RBP18.64■□□□□ 0.57
SNX30-201ENST00000374232 FOXD1Q16676 465 aa18.62■□□□□ 0.57
SNX30-201ENST00000374232 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
SNX30-201ENST00000374232 STK26Q9P289 416 aa18.61■□□□□ 0.57
SNX30-201ENST00000374232 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
SNX30-201ENST00000374232 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
SNX30-201ENST00000374232 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
SNX30-201ENST00000374232 GNL2Q13823 731 aaKnown RBP18.6■□□□□ 0.57
SNX30-201ENST00000374232 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.57
SNX30-201ENST00000374232 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
SNX30-201ENST00000374232 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
SNX30-201ENST00000374232 CLIP1P30622 1438 aa18.55■□□□□ 0.56
SNX30-201ENST00000374232 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
SNX30-201ENST00000374232 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
SNX30-201ENST00000374232 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
SNX30-201ENST00000374232 NRDCO43847 1150 aa18.54■□□□□ 0.56
SNX30-201ENST00000374232 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
SNX30-201ENST00000374232 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms