RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
COL6A5-203ENST00000373157 ASTLQ6HA08 431 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-203ENST00000373157 CDAN1Q8IWY9 1227 aa8.02□□□□□ -1.13
COL6A5-203ENST00000373157 CREBZFQ9NS37 354 aa8□□□□□ -1.13
COL6A5-203ENST00000373157 PHF12Q96QT6 1004 aa7.99□□□□□ -1.13
COL6A5-203ENST00000373157 ATMINO43313 823 aaPredicted RBP7.99□□□□□ -1.13
COL6A5-203ENST00000373157 STAG3Q9UJ98 1225 aa7.97□□□□□ -1.13
COL6A5-203ENST00000373157 NPM1P06748 294 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL6A5-203ENST00000373157 MS4A3Q96HJ5 214 aa7.89□□□□□ -1.15
COL6A5-203ENST00000373157 MMRN1Q13201 1228 aa7.89□□□□□ -1.15
COL6A5-203ENST00000373157 SPNS2Q8IVW8 549 aa7.84□□□□□ -1.15
COL6A5-203ENST00000373157 ATN1P54259 1190 aaPredicted RBP7.83□□□□□ -1.16
COL6A5-203ENST00000373157 POTEFA5A3E0 1075 aa7.81□□□□□ -1.16
COL6A5-203ENST00000373157 ST18O60284 1047 aa7.77□□□□□ -1.17
COL6A5-203ENST00000373157 MNX1P50219 401 aaPredicted RBP7.77□□□□□ -1.17
COL6A5-203ENST00000373157 TIE1P35590 1138 aa7.74□□□□□ -1.17
COL6A5-203ENST00000373157 TMEM121BQ9BXQ6 578 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-203ENST00000373157 BMP2KQ9NSY1 1161 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-203ENST00000373157 SEC24BO95487 1268 aa7.71□□□□□ -1.18
COL6A5-203ENST00000373157 IER5LQ5T953 404 aa7.69□□□□□ -1.18
COL6A5-203ENST00000373157 SLAIN1Q8ND83 568 aa7.69□□□□□ -1.18
COL6A5-203ENST00000373157 KIF12Q96FN5 646 aa7.69□□□□□ -1.18
COL6A5-203ENST00000373157 COLQQ9Y215 455 aaPredicted RBP7.68□□□□□ -1.18
COL6A5-203ENST00000373157 CCDC61Q9Y6R9 512 aa7.68□□□□□ -1.18
COL6A5-203ENST00000373157 SNPHO15079 494 aa7.65□□□□□ -1.18
COL6A5-203ENST00000373157 TSPYL2Q9H2G4 693 aaPredicted RBP7.63□□□□□ -1.19
COL6A5-203ENST00000373157 TTLL13PA6NNM8 815 aa7.61□□□□□ -1.19
COL6A5-203ENST00000373157 TRPC6Q9Y210 931 aa7.6□□□□□ -1.19
COL6A5-203ENST00000373157 MAP3K13O43283 966 aa7.56□□□□□ -1.2
COL6A5-203ENST00000373157 SGIP1Q9BQI5 828 aa7.55□□□□□ -1.2
COL6A5-203ENST00000373157 TRIM35Q9UPQ4 493 aa7.55□□□□□ -1.2
COL6A5-203ENST00000373157 SPDYE4A6NLX3 237 aa7.52□□□□□ -1.21
COL6A5-203ENST00000373157 PLCG2P16885 1265 aa7.52□□□□□ -1.21
COL6A5-203ENST00000373157 FKBP8Q14318 412 aa7.51□□□□□ -1.21
COL6A5-203ENST00000373157 MARVELD3Q96A59 401 aa7.51□□□□□ -1.21
COL6A5-203ENST00000373157 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
COL6A5-203ENST00000373157 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
COL6A5-203ENST00000373157 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.48□□□□□ -1.21
COL6A5-203ENST00000373157 EMP3P54852 163 aa7.46□□□□□ -1.21
COL6A5-203ENST00000373157 IRX5P78411 483 aaPredicted RBP7.45□□□□□ -1.22
COL6A5-203ENST00000373157 HS3ST6Q96QI5 342 aa7.43□□□□□ -1.22
COL6A5-203ENST00000373157 OCEL1Q9H607 264 aa7.41□□□□□ -1.22
COL6A5-203ENST00000373157 RTN4Q9NQC3 1192 aaKnown RBP7.41□□□□□ -1.22
COL6A5-203ENST00000373157 PCDHB13Q9Y5F0 798 aa7.41□□□□□ -1.22
COL6A5-203ENST00000373157 POTEB3A0JP26 581 aa7.39□□□□□ -1.23
COL6A5-203ENST00000373157 AMER1Q5JTC6 1135 aaPredicted RBP7.39□□□□□ -1.23
COL6A5-203ENST00000373157 POTEBQ6S5H4 581 aa7.39□□□□□ -1.23
COL6A5-203ENST00000373157 TMEM106CQ9BVX2 250 aa7.39□□□□□ -1.23
COL6A5-203ENST00000373157 PLEKHG5O94827 1062 aa7.38□□□□□ -1.23
COL6A5-203ENST00000373157 RASEFQ8IZ41 740 aa7.38□□□□□ -1.23
COL6A5-203ENST00000373157 FAM205CA6NFA0 338 aa7.38□□□□□ -1.23
COL6A5-203ENST00000373157 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
COL6A5-203ENST00000373157 IFNL1Q8IU54 200 aa7.33□□□□□ -1.24
COL6A5-203ENST00000373157 C3orf67Q6ZVT6 689 aa7.3□□□□□ -1.24
COL6A5-203ENST00000373157 L3MBTL3Q96JM7 780 aaPredicted RBP7.3□□□□□ -1.24
COL6A5-203ENST00000373157 PROM2Q8N271 834 aa7.29□□□□□ -1.24
COL6A5-203ENST00000373157 MYT1LQ9UL68 1186 aa7.29□□□□□ -1.24
COL6A5-203ENST00000373157 PTGER2P43116 358 aa7.27□□□□□ -1.25
COL6A5-203ENST00000373157 MIER1Q8N108 512 aa7.25□□□□□ -1.25
COL6A5-203ENST00000373157 HOXB1P14653 301 aaPredicted RBP7.22□□□□□ -1.25
COL6A5-203ENST00000373157 ZBTB47Q9UFB7 747 aaPredicted RBP7.21□□□□□ -1.25
COL6A5-203ENST00000373157 SLC24A1O60721 1099 aa7.2□□□□□ -1.26
COL6A5-203ENST00000373157 PDCD7Q8N8D1 485 aaKnown RBP7.2□□□□□ -1.26
COL6A5-203ENST00000373157 NUBP1P53384 320 aa7.2□□□□□ -1.26
COL6A5-203ENST00000373157 ERBB3P21860 1342 aa7.2□□□□□ -1.26
COL6A5-203ENST00000373157 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
COL6A5-203ENST00000373157 HOXB3P14651 431 aaPredicted RBP7.16□□□□□ -1.26
COL6A5-203ENST00000373157 ZNF710Q8N1W2 664 aa7.15□□□□□ -1.27
COL6A5-203ENST00000373157 DOK7Q18PE1 504 aa7.14□□□□□ -1.27
COL6A5-203ENST00000373157 MKRN3Q13064 507 aaKnown RBP7.13□□□□□ -1.27
COL6A5-203ENST00000373157 ZNF687Q8N1G0 1237 aa7.13□□□□□ -1.27
COL6A5-203ENST00000373157 FBXO3Q9UK99 471 aa7.13□□□□□ -1.27
COL6A5-203ENST00000373157 PLCD3Q8N3E9 789 aa7.12□□□□□ -1.27
COL6A5-203ENST00000373157 RIMBP2O15034 1052 aa7.1□□□□□ -1.27
COL6A5-203ENST00000373157 GOLGA2Q08379 1002 aa7.1□□□□□ -1.27
COL6A5-203ENST00000373157 VARS2Q5ST30 1063 aaKnown RBP7.09□□□□□ -1.27
COL6A5-203ENST00000373157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.08□□□□□ -1.28
COL6A5-203ENST00000373157 PLA2G2EQ9NZK7 142 aa7.08□□□□□ -1.28
COL6A5-203ENST00000373157 ILDR1Q86SU0 546 aaPredicted RBP7.07□□□□□ -1.28
COL6A5-203ENST00000373157 ZSWIM6Q9HCJ5 1215 aa7.06□□□□□ -1.28
COL6A5-203ENST00000373157 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
COL6A5-203ENST00000373157 G3V3G9 751 aa7.05□□□□□ -1.28
COL6A5-203ENST00000373157 DCAF8Q5TAQ9 597 aa7.05□□□□□ -1.28
COL6A5-203ENST00000373157 VASPP50552 380 aaPredicted RBP7.04□□□□□ -1.28
COL6A5-203ENST00000373157 ZNF467Q7Z7K2 595 aaPredicted RBP7.03□□□□□ -1.28
COL6A5-203ENST00000373157 PYGBP11216 843 aa7.01□□□□□ -1.29
COL6A5-203ENST00000373157 HCSTQ9UBK5 93 aa7.01□□□□□ -1.29
COL6A5-203ENST00000373157 BOLA1Q9Y3E2 137 aa7.01□□□□□ -1.29
COL6A5-203ENST00000373157 RGS20O76081 388 aa6.99□□□□□ -1.29
COL6A5-203ENST00000373157 ANKRD13DQ6ZTN6 518 aa6.99□□□□□ -1.29
COL6A5-203ENST00000373157 IFNLR1Q8IU57 520 aaPredicted RBP6.97□□□□□ -1.29
COL6A5-203ENST00000373157 LSM11P83369 360 aaKnown RBP eCLIP6.95□□□□□ -1.3
COL6A5-203ENST00000373157 DPY19L2Q6NUT2 758 aa6.95□□□□□ -1.3
COL6A5-203ENST00000373157 GPR153Q6NV75 609 aa6.94□□□□□ -1.3
COL6A5-203ENST00000373157 PSEN1P49768 467 aa6.92□□□□□ -1.3
COL6A5-203ENST00000373157 CHRM1P11229 460 aaPredicted RBP6.92□□□□□ -1.3
COL6A5-203ENST00000373157 PBX2P40425 430 aa6.91□□□□□ -1.3
COL6A5-203ENST00000373157 IRX2Q9BZI1 471 aaPredicted RBP6.9□□□□□ -1.3
COL6A5-203ENST00000373157 ZNF316A6NFI3 1004 aaPredicted RBP6.87□□□□□ -1.31
COL6A5-203ENST00000373157 GSE1Q14687 1217 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms