RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
BCAS4-202ENST00000371608 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
BCAS4-202ENST00000371608 NACADO15069 1562 aa17.34■□□□□ 0.37
BCAS4-202ENST00000371608 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
BCAS4-202ENST00000371608 CLIP1P30622 1438 aa17.31■□□□□ 0.36
BCAS4-202ENST00000371608 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
BCAS4-202ENST00000371608 POGKQ9P215 609 aa17.27■□□□□ 0.36
BCAS4-202ENST00000371608 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
BCAS4-202ENST00000371608 NPHP1O15259 732 aa17.26■□□□□ 0.35
BCAS4-202ENST00000371608 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
BCAS4-202ENST00000371608 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
BCAS4-202ENST00000371608 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
BCAS4-202ENST00000371608 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
BCAS4-202ENST00000371608 SOX12O15370 315 aa17.22■□□□□ 0.35
BCAS4-202ENST00000371608 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
BCAS4-202ENST00000371608 GGT6Q6P531 493 aa17.19■□□□□ 0.34
BCAS4-202ENST00000371608 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
BCAS4-202ENST00000371608 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
BCAS4-202ENST00000371608 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
BCAS4-202ENST00000371608 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
BCAS4-202ENST00000371608 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
BCAS4-202ENST00000371608 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
BCAS4-202ENST00000371608 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
BCAS4-202ENST00000371608 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
BCAS4-202ENST00000371608 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
BCAS4-202ENST00000371608 CUX2O14529 1486 aa17.09■□□□□ 0.33
BCAS4-202ENST00000371608 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
BCAS4-202ENST00000371608 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
BCAS4-202ENST00000371608 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.33
BCAS4-202ENST00000371608 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.33
BCAS4-202ENST00000371608 FKBP8Q14318 412 aa17.08■□□□□ 0.32
BCAS4-202ENST00000371608 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
BCAS4-202ENST00000371608 ANP32AP39687 249 aaKnown RBP17.07■□□□□ 0.32
BCAS4-202ENST00000371608 STK26Q9P289 416 aa17.07■□□□□ 0.32
BCAS4-202ENST00000371608 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
BCAS4-202ENST00000371608 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
BCAS4-202ENST00000371608 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
BCAS4-202ENST00000371608 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
BCAS4-202ENST00000371608 KANK1Q14678 1352 aa17.04■□□□□ 0.32
BCAS4-202ENST00000371608 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
BCAS4-202ENST00000371608 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
BCAS4-202ENST00000371608 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
BCAS4-202ENST00000371608 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
BCAS4-202ENST00000371608 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
BCAS4-202ENST00000371608 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
BCAS4-202ENST00000371608 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.32
BCAS4-202ENST00000371608 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.31
BCAS4-202ENST00000371608 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
BCAS4-202ENST00000371608 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
BCAS4-202ENST00000371608 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
BCAS4-202ENST00000371608 CDCA8Q53HL2 280 aa16.99■□□□□ 0.31
BCAS4-202ENST00000371608 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
BCAS4-202ENST00000371608 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
BCAS4-202ENST00000371608 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
BCAS4-202ENST00000371608 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
BCAS4-202ENST00000371608 DCAF11Q8TEB1 546 aa16.96■□□□□ 0.31
BCAS4-202ENST00000371608 CC2D1BQ5T0F9 858 aaKnown RBP16.95■□□□□ 0.3
BCAS4-202ENST00000371608 SOGA1O94964 1423 aa16.95■□□□□ 0.3
BCAS4-202ENST00000371608 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
BCAS4-202ENST00000371608 EEA1Q15075 1411 aa16.94■□□□□ 0.3
BCAS4-202ENST00000371608 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
BCAS4-202ENST00000371608 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
BCAS4-202ENST00000371608 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
BCAS4-202ENST00000371608 SIN3AQ96ST3 1273 aa16.91■□□□□ 0.3
BCAS4-202ENST00000371608 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
BCAS4-202ENST00000371608 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
BCAS4-202ENST00000371608 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
BCAS4-202ENST00000371608 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
BCAS4-202ENST00000371608 ANP32BQ92688 251 aaKnown RBP16.85■□□□□ 0.29
BCAS4-202ENST00000371608 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
BCAS4-202ENST00000371608 KIF3BO15066 747 aa16.85■□□□□ 0.29
BCAS4-202ENST00000371608 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
BCAS4-202ENST00000371608 FOXD1Q16676 465 aa16.84■□□□□ 0.29
BCAS4-202ENST00000371608 OS9Q13438 667 aaPredicted RBP16.83■□□□□ 0.29
BCAS4-202ENST00000371608 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.29
BCAS4-202ENST00000371608 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
BCAS4-202ENST00000371608 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
BCAS4-202ENST00000371608 CDK11BP21127 795 aaKnown RBP16.81■□□□□ 0.28
BCAS4-202ENST00000371608 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
BCAS4-202ENST00000371608 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
BCAS4-202ENST00000371608 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
BCAS4-202ENST00000371608 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
BCAS4-202ENST00000371608 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
BCAS4-202ENST00000371608 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
BCAS4-202ENST00000371608 TMF1P82094 1093 aa16.78■□□□□ 0.28
BCAS4-202ENST00000371608 PKD2Q13563 968 aa16.78■□□□□ 0.28
BCAS4-202ENST00000371608 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.28
BCAS4-202ENST00000371608 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
BCAS4-202ENST00000371608 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
BCAS4-202ENST00000371608 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
BCAS4-202ENST00000371608 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
BCAS4-202ENST00000371608 MIER1Q8N108 512 aa16.75■□□□□ 0.27
BCAS4-202ENST00000371608 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
BCAS4-202ENST00000371608 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
BCAS4-202ENST00000371608 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
BCAS4-202ENST00000371608 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
BCAS4-202ENST00000371608 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
BCAS4-202ENST00000371608 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
BCAS4-202ENST00000371608 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.26
BCAS4-202ENST00000371608 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms