RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
LRRC39-203ENST00000370138 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
LRRC39-203ENST00000370138 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
LRRC39-203ENST00000370138 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
LRRC39-203ENST00000370138 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
LRRC39-203ENST00000370138 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
LRRC39-203ENST00000370138 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
LRRC39-203ENST00000370138 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
LRRC39-203ENST00000370138 NUBP1P53384 320 aa10.82□□□□□ -0.68
LRRC39-203ENST00000370138 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
LRRC39-203ENST00000370138 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
LRRC39-203ENST00000370138 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
LRRC39-203ENST00000370138 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
LRRC39-203ENST00000370138 MAP3K13O43283 966 aa10.74□□□□□ -0.69
LRRC39-203ENST00000370138 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
LRRC39-203ENST00000370138 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
LRRC39-203ENST00000370138 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
LRRC39-203ENST00000370138 ASTLQ6HA08 431 aaPredicted RBP10.69□□□□□ -0.7
LRRC39-203ENST00000370138 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
LRRC39-203ENST00000370138 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
LRRC39-203ENST00000370138 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
LRRC39-203ENST00000370138 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
LRRC39-203ENST00000370138 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
LRRC39-203ENST00000370138 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
LRRC39-203ENST00000370138 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
LRRC39-203ENST00000370138 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
LRRC39-203ENST00000370138 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
LRRC39-203ENST00000370138 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
LRRC39-203ENST00000370138 PYGBP11216 843 aa10.6□□□□□ -0.71
LRRC39-203ENST00000370138 METRNQ9UJH8 293 aa10.6□□□□□ -0.71
LRRC39-203ENST00000370138 TIE1P35590 1138 aa10.59□□□□□ -0.71
LRRC39-203ENST00000370138 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
LRRC39-203ENST00000370138 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
LRRC39-203ENST00000370138 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
LRRC39-203ENST00000370138 C7P10643 843 aa10.55□□□□□ -0.72
LRRC39-203ENST00000370138 MAMSTRQ6ZN01 415 aa10.55□□□□□ -0.72
LRRC39-203ENST00000370138 GSE1Q14687 1217 aa10.52□□□□□ -0.73
LRRC39-203ENST00000370138 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
LRRC39-203ENST00000370138 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
LRRC39-203ENST00000370138 POTEJP0CG39 1038 aa10.51□□□□□ -0.73
LRRC39-203ENST00000370138 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
LRRC39-203ENST00000370138 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
LRRC39-203ENST00000370138 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
LRRC39-203ENST00000370138 COLQQ9Y215 455 aaPredicted RBP10.46□□□□□ -0.74
LRRC39-203ENST00000370138 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
LRRC39-203ENST00000370138 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
LRRC39-203ENST00000370138 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
LRRC39-203ENST00000370138 IER5LQ5T953 404 aa10.41□□□□□ -0.74
LRRC39-203ENST00000370138 SEC24BO95487 1268 aa10.4□□□□□ -0.74
LRRC39-203ENST00000370138 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
LRRC39-203ENST00000370138 SCUBE2Q9NQ36 999 aa10.39□□□□□ -0.75
LRRC39-203ENST00000370138 PSEN1P49768 467 aa10.34□□□□□ -0.75
LRRC39-203ENST00000370138 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
LRRC39-203ENST00000370138 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
LRRC39-203ENST00000370138 PLCG2P16885 1265 aa10.31□□□□□ -0.76
LRRC39-203ENST00000370138 PDAP1Q13442 181 aaKnown RBP10.29□□□□□ -0.76
LRRC39-203ENST00000370138 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
LRRC39-203ENST00000370138 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
LRRC39-203ENST00000370138 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
LRRC39-203ENST00000370138 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
LRRC39-203ENST00000370138 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
LRRC39-203ENST00000370138 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
LRRC39-203ENST00000370138 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
LRRC39-203ENST00000370138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.78
LRRC39-203ENST00000370138 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
LRRC39-203ENST00000370138 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
LRRC39-203ENST00000370138 SLAIN1Q8ND83 568 aa10.17□□□□□ -0.78
LRRC39-203ENST00000370138 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
LRRC39-203ENST00000370138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
LRRC39-203ENST00000370138 EFCAB3Q8N7B9 438 aa10.12□□□□□ -0.79
LRRC39-203ENST00000370138 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
LRRC39-203ENST00000370138 ST18O60284 1047 aa10.11□□□□□ -0.79
LRRC39-203ENST00000370138 VGFO15240 615 aaPredicted RBP10.1□□□□□ -0.79
LRRC39-203ENST00000370138 PKD2Q13563 968 aa10.1□□□□□ -0.79
LRRC39-203ENST00000370138 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
LRRC39-203ENST00000370138 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
LRRC39-203ENST00000370138 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
LRRC39-203ENST00000370138 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
LRRC39-203ENST00000370138 RGL2O15211 777 aa10.04□□□□□ -0.8
LRRC39-203ENST00000370138 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
LRRC39-203ENST00000370138 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
LRRC39-203ENST00000370138 BCL11BQ9C0K0 894 aaPredicted RBP10.01□□□□□ -0.81
LRRC39-203ENST00000370138 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
LRRC39-203ENST00000370138 SOX12O15370 315 aa9.99□□□□□ -0.81
LRRC39-203ENST00000370138 STK24Q9Y6E0 443 aa9.98□□□□□ -0.81
LRRC39-203ENST00000370138 TMEM121BQ9BXQ6 578 aaPredicted RBP9.98□□□□□ -0.81
LRRC39-203ENST00000370138 G3V3G9 751 aa9.97□□□□□ -0.81
LRRC39-203ENST00000370138 TAOK2Q9UL54 1235 aa9.97□□□□□ -0.81
LRRC39-203ENST00000370138 STK25O00506 426 aa9.96□□□□□ -0.82
LRRC39-203ENST00000370138 SNPHO15079 494 aa9.93□□□□□ -0.82
LRRC39-203ENST00000370138 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
LRRC39-203ENST00000370138 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
LRRC39-203ENST00000370138 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
LRRC39-203ENST00000370138 NLRP6P59044 892 aa9.9□□□□□ -0.83
LRRC39-203ENST00000370138 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.83
LRRC39-203ENST00000370138 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
LRRC39-203ENST00000370138 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
LRRC39-203ENST00000370138 EMP3P54852 163 aa9.79□□□□□ -0.84
LRRC39-203ENST00000370138 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
LRRC39-203ENST00000370138 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms