RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
GBF1-201ENST00000369983 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
GBF1-201ENST00000369983 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
GBF1-201ENST00000369983 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
GBF1-201ENST00000369983 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
GBF1-201ENST00000369983 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
GBF1-201ENST00000369983 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
GBF1-201ENST00000369983 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
GBF1-201ENST00000369983 PPM1GO15355 546 aaPredicted RBP17.39■□□□□ 0.37
GBF1-201ENST00000369983 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
GBF1-201ENST00000369983 CCDC136Q96JN2 1154 aa17.37■□□□□ 0.37
GBF1-201ENST00000369983 POGKQ9P215 609 aa17.37■□□□□ 0.37
GBF1-201ENST00000369983 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
GBF1-201ENST00000369983 DDX10Q13206 875 aaKnown RBP17.36■□□□□ 0.37
GBF1-201ENST00000369983 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
GBF1-201ENST00000369983 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
GBF1-201ENST00000369983 FKBP8Q14318 412 aa17.34■□□□□ 0.37
GBF1-201ENST00000369983 MRS2Q9HD23 443 aa17.33■□□□□ 0.37
GBF1-201ENST00000369983 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
GBF1-201ENST00000369983 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
GBF1-201ENST00000369983 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
GBF1-201ENST00000369983 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
GBF1-201ENST00000369983 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
GBF1-201ENST00000369983 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
GBF1-201ENST00000369983 NUDCQ9Y266 331 aa17.27■□□□□ 0.35
GBF1-201ENST00000369983 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
GBF1-201ENST00000369983 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
GBF1-201ENST00000369983 KNSTRNQ9Y448 316 aa17.26■□□□□ 0.35
GBF1-201ENST00000369983 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
GBF1-201ENST00000369983 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
GBF1-201ENST00000369983 MLECQ14165 292 aa17.23■□□□□ 0.35
GBF1-201ENST00000369983 KANK1Q14678 1352 aa17.23■□□□□ 0.35
GBF1-201ENST00000369983 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
GBF1-201ENST00000369983 BECN1Q14457 450 aa17.22■□□□□ 0.35
GBF1-201ENST00000369983 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
GBF1-201ENST00000369983 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
GBF1-201ENST00000369983 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
GBF1-201ENST00000369983 CLIP1P30622 1438 aa17.21■□□□□ 0.35
GBF1-201ENST00000369983 CLSTN1O94985 981 aa17.2■□□□□ 0.34
GBF1-201ENST00000369983 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
GBF1-201ENST00000369983 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
GBF1-201ENST00000369983 EEA1Q15075 1411 aa17.17■□□□□ 0.34
GBF1-201ENST00000369983 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
GBF1-201ENST00000369983 FGD1P98174 961 aa17.16■□□□□ 0.34
GBF1-201ENST00000369983 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
GBF1-201ENST00000369983 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
GBF1-201ENST00000369983 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
GBF1-201ENST00000369983 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
GBF1-201ENST00000369983 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
GBF1-201ENST00000369983 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
GBF1-201ENST00000369983 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
GBF1-201ENST00000369983 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
GBF1-201ENST00000369983 NACADO15069 1562 aa17.11■□□□□ 0.33
GBF1-201ENST00000369983 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
GBF1-201ENST00000369983 KCNJ4P48050 445 aa17.1■□□□□ 0.33
GBF1-201ENST00000369983 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
GBF1-201ENST00000369983 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
GBF1-201ENST00000369983 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
GBF1-201ENST00000369983 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
GBF1-201ENST00000369983 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
GBF1-201ENST00000369983 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
GBF1-201ENST00000369983 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
GBF1-201ENST00000369983 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
GBF1-201ENST00000369983 SOX12O15370 315 aa17.06■□□□□ 0.32
GBF1-201ENST00000369983 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
GBF1-201ENST00000369983 MS4A1P11836 297 aa17.05■□□□□ 0.32
GBF1-201ENST00000369983 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
GBF1-201ENST00000369983 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
GBF1-201ENST00000369983 NBR1Q14596 966 aa17.04■□□□□ 0.32
GBF1-201ENST00000369983 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
GBF1-201ENST00000369983 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
GBF1-201ENST00000369983 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
GBF1-201ENST00000369983 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.31
GBF1-201ENST00000369983 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
GBF1-201ENST00000369983 G3V3G9 751 aa17■□□□□ 0.31
GBF1-201ENST00000369983 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
GBF1-201ENST00000369983 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
GBF1-201ENST00000369983 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
GBF1-201ENST00000369983 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
GBF1-201ENST00000369983 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
GBF1-201ENST00000369983 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.31
GBF1-201ENST00000369983 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
GBF1-201ENST00000369983 NRDCO43847 1150 aa16.95■□□□□ 0.3
GBF1-201ENST00000369983 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
GBF1-201ENST00000369983 TMF1P82094 1093 aa16.94■□□□□ 0.3
GBF1-201ENST00000369983 GGT6Q6P531 493 aa16.94■□□□□ 0.3
GBF1-201ENST00000369983 DNTTIP2Q5QJE6 756 aaKnown RBP16.94■□□□□ 0.3
GBF1-201ENST00000369983 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
GBF1-201ENST00000369983 GNL2Q13823 731 aaKnown RBP16.92■□□□□ 0.3
GBF1-201ENST00000369983 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
GBF1-201ENST00000369983 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
GBF1-201ENST00000369983 MCCP23508 829 aa16.91■□□□□ 0.3
GBF1-201ENST00000369983 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
GBF1-201ENST00000369983 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
GBF1-201ENST00000369983 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
GBF1-201ENST00000369983 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
GBF1-201ENST00000369983 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
GBF1-201ENST00000369983 STK26Q9P289 416 aa16.89■□□□□ 0.29
GBF1-201ENST00000369983 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
GBF1-201ENST00000369983 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms