RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
SH3PXD2A-203ENST00000369774 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
SH3PXD2A-203ENST00000369774 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
SH3PXD2A-203ENST00000369774 BECN1Q14457 450 aa17.2■□□□□ 0.34
SH3PXD2A-203ENST00000369774 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
SH3PXD2A-203ENST00000369774 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
SH3PXD2A-203ENST00000369774 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
SH3PXD2A-203ENST00000369774 MTUS2Q5JR59 1369 aa17.19■□□□□ 0.34
SH3PXD2A-203ENST00000369774 ZRSR1Q15695 479 aaKnown RBP17.18■□□□□ 0.34
SH3PXD2A-203ENST00000369774 TRIM44Q96DX7 344 aaPredicted RBP17.18■□□□□ 0.34
SH3PXD2A-203ENST00000369774 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
SH3PXD2A-203ENST00000369774 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
SH3PXD2A-203ENST00000369774 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
SH3PXD2A-203ENST00000369774 GOLGA6L22H0YM25 854 aa17.14■□□□□ 0.33
SH3PXD2A-203ENST00000369774 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
SH3PXD2A-203ENST00000369774 NPHP1O15259 732 aa17.13■□□□□ 0.33
SH3PXD2A-203ENST00000369774 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
SH3PXD2A-203ENST00000369774 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
SH3PXD2A-203ENST00000369774 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
SH3PXD2A-203ENST00000369774 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
SH3PXD2A-203ENST00000369774 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
SH3PXD2A-203ENST00000369774 EIF4G2P78344 907 aaKnown RBP eCLIP17.1■□□□□ 0.33
SH3PXD2A-203ENST00000369774 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
SH3PXD2A-203ENST00000369774 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SH3PXD2A-203ENST00000369774 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
SH3PXD2A-203ENST00000369774 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
SH3PXD2A-203ENST00000369774 LMOD2Q6P5Q4 547 aa17.07■□□□□ 0.32
SH3PXD2A-203ENST00000369774 DNTTIP2Q5QJE6 756 aaKnown RBP17.05■□□□□ 0.32
SH3PXD2A-203ENST00000369774 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
SH3PXD2A-203ENST00000369774 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.31
SH3PXD2A-203ENST00000369774 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
SH3PXD2A-203ENST00000369774 MIER1Q8N108 512 aa17■□□□□ 0.31
SH3PXD2A-203ENST00000369774 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
SH3PXD2A-203ENST00000369774 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
SH3PXD2A-203ENST00000369774 FGD1P98174 961 aa16.97■□□□□ 0.31
SH3PXD2A-203ENST00000369774 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
SH3PXD2A-203ENST00000369774 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
SH3PXD2A-203ENST00000369774 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
SH3PXD2A-203ENST00000369774 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
SH3PXD2A-203ENST00000369774 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
SH3PXD2A-203ENST00000369774 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
SH3PXD2A-203ENST00000369774 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
SH3PXD2A-203ENST00000369774 POGKQ9P215 609 aa16.95■□□□□ 0.3
SH3PXD2A-203ENST00000369774 KCNJ4P48050 445 aa16.93■□□□□ 0.3
SH3PXD2A-203ENST00000369774 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
SH3PXD2A-203ENST00000369774 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
SH3PXD2A-203ENST00000369774 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
SH3PXD2A-203ENST00000369774 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
SH3PXD2A-203ENST00000369774 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SH3PXD2A-203ENST00000369774 CLSTN1O94985 981 aa16.88■□□□□ 0.29
SH3PXD2A-203ENST00000369774 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
SH3PXD2A-203ENST00000369774 CLIP1P30622 1438 aa16.88■□□□□ 0.29
SH3PXD2A-203ENST00000369774 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
SH3PXD2A-203ENST00000369774 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
SH3PXD2A-203ENST00000369774 RGS3P49796 1198 aa16.86■□□□□ 0.29
SH3PXD2A-203ENST00000369774 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
SH3PXD2A-203ENST00000369774 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
SH3PXD2A-203ENST00000369774 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
SH3PXD2A-203ENST00000369774 NAP1L5Q96NT1 182 aaPredicted RBP16.83■□□□□ 0.29
SH3PXD2A-203ENST00000369774 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.29
SH3PXD2A-203ENST00000369774 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
SH3PXD2A-203ENST00000369774 SOX12O15370 315 aa16.81■□□□□ 0.28
SH3PXD2A-203ENST00000369774 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
SH3PXD2A-203ENST00000369774 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
SH3PXD2A-203ENST00000369774 NRDCO43847 1150 aa16.8■□□□□ 0.28
SH3PXD2A-203ENST00000369774 GOLGA6L4A6NEF3 574 aa16.79■□□□□ 0.28
SH3PXD2A-203ENST00000369774 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.27
SH3PXD2A-203ENST00000369774 MS4A1P11836 297 aa16.76■□□□□ 0.27
SH3PXD2A-203ENST00000369774 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
SH3PXD2A-203ENST00000369774 MLECQ14165 292 aa16.73■□□□□ 0.27
SH3PXD2A-203ENST00000369774 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
SH3PXD2A-203ENST00000369774 DRC7Q8IY82 874 aa16.71■□□□□ 0.27
SH3PXD2A-203ENST00000369774 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
SH3PXD2A-203ENST00000369774 HSCBQ8IWL3 235 aa16.7■□□□□ 0.26
SH3PXD2A-203ENST00000369774 MCCP23508 829 aa16.7■□□□□ 0.26
SH3PXD2A-203ENST00000369774 GNL2Q13823 731 aaKnown RBP16.7■□□□□ 0.26
SH3PXD2A-203ENST00000369774 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
SH3PXD2A-203ENST00000369774 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
SH3PXD2A-203ENST00000369774 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
SH3PXD2A-203ENST00000369774 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
SH3PXD2A-203ENST00000369774 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
SH3PXD2A-203ENST00000369774 PPP4R2Q9NY27 417 aa16.67■□□□□ 0.26
SH3PXD2A-203ENST00000369774 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
SH3PXD2A-203ENST00000369774 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
SH3PXD2A-203ENST00000369774 KANK1Q14678 1352 aa16.65■□□□□ 0.26
SH3PXD2A-203ENST00000369774 TMF1P82094 1093 aa16.65■□□□□ 0.26
SH3PXD2A-203ENST00000369774 NOP58Q9Y2X3 529 aaKnown RBP16.65■□□□□ 0.26
SH3PXD2A-203ENST00000369774 APBB1O00213 710 aa16.63■□□□□ 0.25
SH3PXD2A-203ENST00000369774 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SH3PXD2A-203ENST00000369774 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
SH3PXD2A-203ENST00000369774 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
SH3PXD2A-203ENST00000369774 MORC1Q86VD1 984 aa16.62■□□□□ 0.25
SH3PXD2A-203ENST00000369774 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
SH3PXD2A-203ENST00000369774 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
SH3PXD2A-203ENST00000369774 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
SH3PXD2A-203ENST00000369774 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
SH3PXD2A-203ENST00000369774 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
SH3PXD2A-203ENST00000369774 STK26Q9P289 416 aa16.61■□□□□ 0.25
SH3PXD2A-203ENST00000369774 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
SH3PXD2A-203ENST00000369774 MSNP26038 577 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms