RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 CLCN6P51797 869 aa15.21■□□□□ 0.03
SFR1-201ENST00000369727 PHF12Q96QT6 1004 aa15.2■□□□□ 0.02
SFR1-201ENST00000369727 DCAF1Q9Y4B6 1507 aa15.19■□□□□ 0.02
SFR1-201ENST00000369727 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
SFR1-201ENST00000369727 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
SFR1-201ENST00000369727 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
SFR1-201ENST00000369727 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
SFR1-201ENST00000369727 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
SFR1-201ENST00000369727 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
SFR1-201ENST00000369727 POTEIP0CG38 1075 aa15.08■□□□□ 0
SFR1-201ENST00000369727 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
SFR1-201ENST00000369727 NUBP1P53384 320 aa15.06■□□□□ 0
SFR1-201ENST00000369727 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
SFR1-201ENST00000369727 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
SFR1-201ENST00000369727 MS4A3Q96HJ5 214 aa15□□□□□ -0.01
SFR1-201ENST00000369727 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
SFR1-201ENST00000369727 KIF12Q96FN5 646 aa14.96□□□□□ -0.01
SFR1-201ENST00000369727 FAM212AQ96EL1 285 aa14.93□□□□□ -0.02
SFR1-201ENST00000369727 MAP3K13O43283 966 aa14.9□□□□□ -0.02
SFR1-201ENST00000369727 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
SFR1-201ENST00000369727 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
SFR1-201ENST00000369727 DCAF8Q5TAQ9 597 aa14.87□□□□□ -0.03
SFR1-201ENST00000369727 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SFR1-201ENST00000369727 LHX8Q68G74 356 aa14.81□□□□□ -0.04
SFR1-201ENST00000369727 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
SFR1-201ENST00000369727 ATMINO43313 823 aaPredicted RBP14.79□□□□□ -0.04
SFR1-201ENST00000369727 ASTLQ6HA08 431 aaPredicted RBP14.79□□□□□ -0.04
SFR1-201ENST00000369727 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
SFR1-201ENST00000369727 PCDHB13Q9Y5F0 798 aa14.79□□□□□ -0.04
SFR1-201ENST00000369727 SGIP1Q9BQI5 828 aa14.76□□□□□ -0.05
SFR1-201ENST00000369727 PYGBP11216 843 aa14.75□□□□□ -0.05
SFR1-201ENST00000369727 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
SFR1-201ENST00000369727 GSE1Q14687 1217 aa14.74□□□□□ -0.05
SFR1-201ENST00000369727 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
SFR1-201ENST00000369727 IFNL1Q8IU54 200 aa14.73□□□□□ -0.05
SFR1-201ENST00000369727 ATN1P54259 1190 aaPredicted RBP14.72□□□□□ -0.05
SFR1-201ENST00000369727 TIE1P35590 1138 aa14.7□□□□□ -0.06
SFR1-201ENST00000369727 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
SFR1-201ENST00000369727 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
SFR1-201ENST00000369727 METRNQ9UJH8 293 aa14.65□□□□□ -0.06
SFR1-201ENST00000369727 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
SFR1-201ENST00000369727 C7P10643 843 aa14.62□□□□□ -0.07
SFR1-201ENST00000369727 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
SFR1-201ENST00000369727 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
SFR1-201ENST00000369727 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
SFR1-201ENST00000369727 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
SFR1-201ENST00000369727 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
SFR1-201ENST00000369727 CHRM1P11229 460 aaPredicted RBP14.57□□□□□ -0.08
SFR1-201ENST00000369727 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
SFR1-201ENST00000369727 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.08
SFR1-201ENST00000369727 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.09
SFR1-201ENST00000369727 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
SFR1-201ENST00000369727 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
SFR1-201ENST00000369727 IER5LQ5T953 404 aa14.45□□□□□ -0.1
SFR1-201ENST00000369727 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
SFR1-201ENST00000369727 SEC24BO95487 1268 aa14.44□□□□□ -0.1
SFR1-201ENST00000369727 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
SFR1-201ENST00000369727 PSEN1P49768 467 aa14.41□□□□□ -0.1
SFR1-201ENST00000369727 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
SFR1-201ENST00000369727 PDAP1Q13442 181 aaKnown RBP14.36□□□□□ -0.11
SFR1-201ENST00000369727 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.11
SFR1-201ENST00000369727 PLCG2P16885 1265 aa14.32□□□□□ -0.12
SFR1-201ENST00000369727 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
SFR1-201ENST00000369727 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
SFR1-201ENST00000369727 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
SFR1-201ENST00000369727 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
SFR1-201ENST00000369727 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.12
SFR1-201ENST00000369727 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
SFR1-201ENST00000369727 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
SFR1-201ENST00000369727 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
SFR1-201ENST00000369727 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
SFR1-201ENST00000369727 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
SFR1-201ENST00000369727 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
SFR1-201ENST00000369727 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.14
SFR1-201ENST00000369727 SMARCA2P51531 1590 aa14.2□□□□□ -0.14
SFR1-201ENST00000369727 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
SFR1-201ENST00000369727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.14
SFR1-201ENST00000369727 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
SFR1-201ENST00000369727 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
SFR1-201ENST00000369727 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
SFR1-201ENST00000369727 PKD2Q13563 968 aa14.15□□□□□ -0.14
SFR1-201ENST00000369727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
SFR1-201ENST00000369727 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
SFR1-201ENST00000369727 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
SFR1-201ENST00000369727 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
SFR1-201ENST00000369727 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
SFR1-201ENST00000369727 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
SFR1-201ENST00000369727 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
SFR1-201ENST00000369727 SLAIN1Q8ND83 568 aa14.07□□□□□ -0.16
SFR1-201ENST00000369727 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
SFR1-201ENST00000369727 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
SFR1-201ENST00000369727 RGL2O15211 777 aa14.05□□□□□ -0.16
SFR1-201ENST00000369727 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
SFR1-201ENST00000369727 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.16
SFR1-201ENST00000369727 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
SFR1-201ENST00000369727 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
SFR1-201ENST00000369727 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
SFR1-201ENST00000369727 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
SFR1-201ENST00000369727 SOX12O15370 315 aa13.97□□□□□ -0.17
SFR1-201ENST00000369727 STK25O00506 426 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms