RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 HAP1P54257 671 aaPredicted RBP23.95■■□□□ 1.42
SNX27-203ENST00000368843 MYH16Q9H6N6 1097 aa23.93■■□□□ 1.42
SNX27-203ENST00000368843 HIRIP3Q9BW71 556 aaPredicted RBP23.92■■□□□ 1.42
SNX27-203ENST00000368843 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
SNX27-203ENST00000368843 TPRNQ4KMQ1 711 aa23.9■■□□□ 1.42
SNX27-203ENST00000368843 MRS2Q9HD23 443 aa23.86■■□□□ 1.41
SNX27-203ENST00000368843 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
SNX27-203ENST00000368843 CDK11BP21127 795 aaKnown RBP23.83■■□□□ 1.41
SNX27-203ENST00000368843 TULP1O00294 542 aaPredicted RBP23.82■■□□□ 1.4
SNX27-203ENST00000368843 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
SNX27-203ENST00000368843 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
SNX27-203ENST00000368843 PLEKHD1A6NEE1 506 aa23.72■■□□□ 1.39
SNX27-203ENST00000368843 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
SNX27-203ENST00000368843 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
SNX27-203ENST00000368843 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNX27-203ENST00000368843 CLIP1P30622 1438 aa23.62■■□□□ 1.37
SNX27-203ENST00000368843 NPHP1O15259 732 aa23.61■■□□□ 1.37
SNX27-203ENST00000368843 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
SNX27-203ENST00000368843 CFAP53Q96M91 514 aa23.6■■□□□ 1.37
SNX27-203ENST00000368843 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
SNX27-203ENST00000368843 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
SNX27-203ENST00000368843 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
SNX27-203ENST00000368843 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
SNX27-203ENST00000368843 NCLP19338 710 aaKnown RBP23.56■■□□□ 1.36
SNX27-203ENST00000368843 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
SNX27-203ENST00000368843 KNSTRNQ9Y448 316 aa23.53■■□□□ 1.36
SNX27-203ENST00000368843 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
SNX27-203ENST00000368843 POGKQ9P215 609 aa23.52■■□□□ 1.36
SNX27-203ENST00000368843 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
SNX27-203ENST00000368843 GLIPR1L2Q4G1C9 344 aa23.5■■□□□ 1.35
SNX27-203ENST00000368843 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
SNX27-203ENST00000368843 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
SNX27-203ENST00000368843 CASC1Q6TDU7 716 aa23.47■■□□□ 1.35
SNX27-203ENST00000368843 CDCA8Q53HL2 280 aa23.47■■□□□ 1.35
SNX27-203ENST00000368843 BECN1Q14457 450 aa23.47■■□□□ 1.35
SNX27-203ENST00000368843 MIER1Q8N108 512 aa23.45■■□□□ 1.34
SNX27-203ENST00000368843 MAPK8IP3Q9UPT6 1336 aa23.45■■□□□ 1.34
SNX27-203ENST00000368843 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
SNX27-203ENST00000368843 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
SNX27-203ENST00000368843 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
SNX27-203ENST00000368843 ZRSR1Q15695 479 aaKnown RBP23.42■■□□□ 1.34
SNX27-203ENST00000368843 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
SNX27-203ENST00000368843 RTN4Q9NQC3 1192 aaKnown RBP23.4■■□□□ 1.34
SNX27-203ENST00000368843 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.33
SNX27-203ENST00000368843 MLECQ14165 292 aa23.39■■□□□ 1.33
SNX27-203ENST00000368843 DDRGK1Q96HY6 314 aa23.39■■□□□ 1.33
SNX27-203ENST00000368843 GOLGA6L22H0YM25 854 aa23.37■■□□□ 1.33
SNX27-203ENST00000368843 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
SNX27-203ENST00000368843 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
SNX27-203ENST00000368843 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
SNX27-203ENST00000368843 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
SNX27-203ENST00000368843 SOX12O15370 315 aa23.32■■□□□ 1.32
SNX27-203ENST00000368843 TRIM44Q96DX7 344 aaPredicted RBP23.32■■□□□ 1.32
SNX27-203ENST00000368843 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
SNX27-203ENST00000368843 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
SNX27-203ENST00000368843 GOLGA2Q08379 1002 aa23.31■■□□□ 1.32
SNX27-203ENST00000368843 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
SNX27-203ENST00000368843 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
SNX27-203ENST00000368843 PTMAP06454 111 aaKnown RBP23.28■■□□□ 1.32
SNX27-203ENST00000368843 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
SNX27-203ENST00000368843 NAP1L2Q9ULW6 460 aaPredicted RBP23.26■■□□□ 1.31
SNX27-203ENST00000368843 PLCB2Q00722 1185 aa23.25■■□□□ 1.31
SNX27-203ENST00000368843 DNTTIP2Q5QJE6 756 aaKnown RBP23.25■■□□□ 1.31
SNX27-203ENST00000368843 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
SNX27-203ENST00000368843 FGD1P98174 961 aa23.22■■□□□ 1.31
SNX27-203ENST00000368843 KANK1Q14678 1352 aa23.22■■□□□ 1.31
SNX27-203ENST00000368843 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNX27-203ENST00000368843 KCNJ4P48050 445 aa23.18■■□□□ 1.3
SNX27-203ENST00000368843 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
SNX27-203ENST00000368843 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
SNX27-203ENST00000368843 EEA1Q15075 1411 aa23.18■■□□□ 1.3
SNX27-203ENST00000368843 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
SNX27-203ENST00000368843 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
SNX27-203ENST00000368843 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
SNX27-203ENST00000368843 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
SNX27-203ENST00000368843 RGS3P49796 1198 aa23.15■■□□□ 1.3
SNX27-203ENST00000368843 ANP32EQ9BTT0 268 aa23.15■■□□□ 1.3
SNX27-203ENST00000368843 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
SNX27-203ENST00000368843 SIN3AQ96ST3 1273 aa23.12■■□□□ 1.29
SNX27-203ENST00000368843 SPRYD3Q8NCJ5 442 aa23.12■■□□□ 1.29
SNX27-203ENST00000368843 NAP1L5Q96NT1 182 aaPredicted RBP23.11■■□□□ 1.29
SNX27-203ENST00000368843 ISY1Q9ULR0 285 aaKnown RBP23.11■■□□□ 1.29
SNX27-203ENST00000368843 CLSTN1O94985 981 aa23.1■■□□□ 1.29
SNX27-203ENST00000368843 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
SNX27-203ENST00000368843 TMF1P82094 1093 aa23.1■■□□□ 1.29
SNX27-203ENST00000368843 HSP90AB1P08238 724 aaKnown RBP23.09■■□□□ 1.29
SNX27-203ENST00000368843 STK26Q9P289 416 aa23.09■■□□□ 1.29
SNX27-203ENST00000368843 CHMP4BQ9H444 224 aaKnown RBP23.08■■□□□ 1.29
SNX27-203ENST00000368843 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
SNX27-203ENST00000368843 GGT6Q6P531 493 aa23.06■■□□□ 1.28
SNX27-203ENST00000368843 NACADO15069 1562 aa23.05■■□□□ 1.28
SNX27-203ENST00000368843 RTF1Q92541 710 aaKnown RBP23.04■■□□□ 1.28
SNX27-203ENST00000368843 MS4A1P11836 297 aa23.03■■□□□ 1.28
SNX27-203ENST00000368843 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
SNX27-203ENST00000368843 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
SNX27-203ENST00000368843 GOLGA6L6A8MZA4 724 aa22.99■■□□□ 1.27
SNX27-203ENST00000368843 CSB-PGBD3P0DP91 1061 aa22.99■■□□□ 1.27
SNX27-203ENST00000368843 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
SNX27-203ENST00000368843 CCDC9Q9Y3X0 531 aaKnown RBP22.95■■□□□ 1.26
SNX27-203ENST00000368843 TNIKQ9UKE5 1360 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms