RNA–Protein interactions for RNA: ENST00000368223.3

NES-201, Transcript of nestin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NES, Length 5,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NES-201ENST00000368223 PLEKHG5O94827 1062 aa26.14■■□□□ 1.78
NES-201ENST00000368223 RRP7BPQ9NSQ0 103 aa26.11■■□□□ 1.77
NES-201ENST00000368223 EIF4G2P78344 907 aaKnown RBP eCLIP26.11■■□□□ 1.77
NES-201ENST00000368223 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
NES-201ENST00000368223 C14orf37Q86TY3 774 aa26.03■■□□□ 1.76
NES-201ENST00000368223 CLIP1P30622 1438 aa26■■□□□ 1.75
NES-201ENST00000368223 BECN1Q14457 450 aa26■■□□□ 1.75
NES-201ENST00000368223 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
NES-201ENST00000368223 DDRGK1Q96HY6 314 aa25.98■■□□□ 1.75
NES-201ENST00000368223 CDK11BP21127 795 aaKnown RBP25.97■■□□□ 1.75
NES-201ENST00000368223 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
NES-201ENST00000368223 RGL3Q3MIN7 710 aa25.95■■□□□ 1.74
NES-201ENST00000368223 NCLP19338 710 aaKnown RBP25.94■■□□□ 1.74
NES-201ENST00000368223 KCNH8Q96L42 1107 aa25.92■■□□□ 1.74
NES-201ENST00000368223 TRIM44Q96DX7 344 aaPredicted RBP25.91■■□□□ 1.74
NES-201ENST00000368223 GOLGA6L22H0YM25 854 aa25.86■■□□□ 1.73
NES-201ENST00000368223 TPRNQ4KMQ1 711 aa25.85■■□□□ 1.73
NES-201ENST00000368223 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
NES-201ENST00000368223 SUPT16HQ9Y5B9 1047 aaKnown RBP25.82■■□□□ 1.72
NES-201ENST00000368223 CFAP53Q96M91 514 aa25.82■■□□□ 1.72
NES-201ENST00000368223 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
NES-201ENST00000368223 KNSTRNQ9Y448 316 aa25.8■■□□□ 1.72
NES-201ENST00000368223 NEUROD2Q15784 382 aa25.77■■□□□ 1.72
NES-201ENST00000368223 FTSJ3Q8IY81 847 aaKnown RBP25.77■■□□□ 1.72
NES-201ENST00000368223 ANP32EQ9BTT0 268 aa25.76■■□□□ 1.71
NES-201ENST00000368223 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
NES-201ENST00000368223 PTMAP06454 111 aaKnown RBP25.76■■□□□ 1.71
NES-201ENST00000368223 PLEKHD1A6NEE1 506 aa25.75■■□□□ 1.71
NES-201ENST00000368223 LAS1LQ9Y4W2 734 aaKnown RBP25.74■■□□□ 1.71
NES-201ENST00000368223 CARD11Q9BXL7 1154 aa25.74■■□□□ 1.71
NES-201ENST00000368223 CEP162Q5TB80 1403 aa25.73■■□□□ 1.71
NES-201ENST00000368223 CASC1Q6TDU7 716 aa25.72■■□□□ 1.71
NES-201ENST00000368223 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
NES-201ENST00000368223 ZRSR1Q15695 479 aaKnown RBP25.7■■□□□ 1.71
NES-201ENST00000368223 CDCA8Q53HL2 280 aa25.69■■□□□ 1.7
NES-201ENST00000368223 HAP1P54257 671 aaPredicted RBP25.68■■□□□ 1.7
NES-201ENST00000368223 RGS3P49796 1198 aa25.67■■□□□ 1.7
NES-201ENST00000368223 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
NES-201ENST00000368223 CFDP1Q9UEE9 299 aaPredicted RBP25.65■■□□□ 1.7
NES-201ENST00000368223 MAPK8IP3Q9UPT6 1336 aa25.65■■□□□ 1.7
NES-201ENST00000368223 DNTTIP2Q5QJE6 756 aaKnown RBP25.65■■□□□ 1.7
NES-201ENST00000368223 FRAT1Q92837 279 aaPredicted RBP25.63■■□□□ 1.69
NES-201ENST00000368223 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
NES-201ENST00000368223 TNNT2P45379 298 aaPredicted RBP25.62■■□□□ 1.69
NES-201ENST00000368223 TAOK2Q9UL54 1235 aa25.61■■□□□ 1.69
NES-201ENST00000368223 TULP1O00294 542 aaPredicted RBP25.61■■□□□ 1.69
NES-201ENST00000368223 SIN3AQ96ST3 1273 aa25.6■■□□□ 1.69
NES-201ENST00000368223 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
NES-201ENST00000368223 PPP4R2Q9NY27 417 aa25.57■■□□□ 1.68
NES-201ENST00000368223 RTN4Q9NQC3 1192 aaKnown RBP25.56■■□□□ 1.68
NES-201ENST00000368223 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
NES-201ENST00000368223 PLCB2Q00722 1185 aa25.54■■□□□ 1.68
NES-201ENST00000368223 POGKQ9P215 609 aa25.53■■□□□ 1.68
NES-201ENST00000368223 LMOD2Q6P5Q4 547 aa25.52■■□□□ 1.68
NES-201ENST00000368223 EEA1Q15075 1411 aa25.52■■□□□ 1.68
NES-201ENST00000368223 NAP1L5Q96NT1 182 aaPredicted RBP25.52■■□□□ 1.68
NES-201ENST00000368223 NOP58Q9Y2X3 529 aaKnown RBP25.5■■□□□ 1.67
NES-201ENST00000368223 HSP90AB1P08238 724 aaKnown RBP25.49■■□□□ 1.67
NES-201ENST00000368223 U2SURPO15042 1029 aaKnown RBP25.48■■□□□ 1.67
NES-201ENST00000368223 ERICH6BQ5W0A0 696 aa25.48■■□□□ 1.67
NES-201ENST00000368223 B4GALNT3Q6L9W6 998 aa25.47■■□□□ 1.67
NES-201ENST00000368223 OS9Q13438 667 aaPredicted RBP25.47■■□□□ 1.67
NES-201ENST00000368223 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
NES-201ENST00000368223 FGD1P98174 961 aa25.41■■□□□ 1.66
NES-201ENST00000368223 NAP1L2Q9ULW6 460 aaPredicted RBP25.4■■□□□ 1.66
NES-201ENST00000368223 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
NES-201ENST00000368223 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
NES-201ENST00000368223 KCNJ4P48050 445 aa25.38■■□□□ 1.65
NES-201ENST00000368223 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
NES-201ENST00000368223 NPHP1O15259 732 aa25.37■■□□□ 1.65
NES-201ENST00000368223 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
NES-201ENST00000368223 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
NES-201ENST00000368223 MS4A1P11836 297 aa25.34■■□□□ 1.65
NES-201ENST00000368223 DCAF11Q8TEB1 546 aa25.33■■□□□ 1.65
NES-201ENST00000368223 SPRYD3Q8NCJ5 442 aa25.31■■□□□ 1.64
NES-201ENST00000368223 GOLGA6L6A8MZA4 724 aa25.31■■□□□ 1.64
NES-201ENST00000368223 TMF1P82094 1093 aa25.31■■□□□ 1.64
NES-201ENST00000368223 SOX12O15370 315 aa25.3■■□□□ 1.64
NES-201ENST00000368223 HSCBQ8IWL3 235 aa25.3■■□□□ 1.64
NES-201ENST00000368223 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
NES-201ENST00000368223 PNNQ9H307 717 aaKnown RBP25.27■■□□□ 1.64
NES-201ENST00000368223 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
NES-201ENST00000368223 GOLGA6L4A6NEF3 574 aa25.24■■□□□ 1.63
NES-201ENST00000368223 GOLGA2Q08379 1002 aa25.23■■□□□ 1.63
NES-201ENST00000368223 SAFB2Q14151 953 aaKnown RBP eCLIP25.22■■□□□ 1.63
NES-201ENST00000368223 SRPK2P78362 688 aaKnown RBP25.22■■□□□ 1.63
NES-201ENST00000368223 MORC1Q86VD1 984 aa25.21■■□□□ 1.63
NES-201ENST00000368223 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
NES-201ENST00000368223 NRDCO43847 1150 aa25.18■■□□□ 1.62
NES-201ENST00000368223 MCCP23508 829 aa25.15■■□□□ 1.62
NES-201ENST00000368223 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
NES-201ENST00000368223 APBB1O00213 710 aa25.15■■□□□ 1.62
NES-201ENST00000368223 MLECQ14165 292 aa25.14■■□□□ 1.61
NES-201ENST00000368223 KANK1Q14678 1352 aa25.14■■□□□ 1.61
NES-201ENST00000368223 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.61
NES-201ENST00000368223 MSNP26038 577 aaKnown RBP25.12■■□□□ 1.61
NES-201ENST00000368223 DEKP35659 375 aaKnown RBP25.11■■□□□ 1.61
NES-201ENST00000368223 CHAF1AQ13111 956 aaPredicted RBP25.11■■□□□ 1.61
NES-201ENST00000368223 DRC7Q8IY82 874 aa25.11■■□□□ 1.61
NES-201ENST00000368223 L1TD1Q5T7N2 865 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms