RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 CIZ1Q9ULV3 898 aaPredicted RBP6.6□□□□□ -1.35
RNU1-140P-201ENST00000365040 TAOK2Q9UL54 1235 aa6.59□□□□□ -1.35
RNU1-140P-201ENST00000365040 DCAF1Q9Y4B6 1507 aa6.58□□□□□ -1.36
RNU1-140P-201ENST00000365040 CC2D2AQ9P2K1 1620 aa6.58□□□□□ -1.36
RNU1-140P-201ENST00000365040 PRKAR2AP13861 404 aaKnown RBP6.56□□□□□ -1.36
RNU1-140P-201ENST00000365040 FARP1Q9Y4F1 1045 aaPredicted RBP6.56□□□□□ -1.36
RNU1-140P-201ENST00000365040 DCAF8Q5TAQ9 597 aa6.55□□□□□ -1.36
RNU1-140P-201ENST00000365040 CECR2Q9BXF3 1484 aa6.54□□□□□ -1.36
RNU1-140P-201ENST00000365040 SLC24A1O60721 1099 aa6.54□□□□□ -1.36
RNU1-140P-201ENST00000365040 PAK3O75914 559 aaPredicted RBP6.54□□□□□ -1.36
RNU1-140P-201ENST00000365040 DCAF8L2P0C7V8 631 aa6.54□□□□□ -1.36
RNU1-140P-201ENST00000365040 CHRM1P11229 460 aaPredicted RBP6.54□□□□□ -1.36
RNU1-140P-201ENST00000365040 EIF4G1Q04637 1599 aaKnown RBP6.53□□□□□ -1.36
RNU1-140P-201ENST00000365040 CHADLQ6NUI6 762 aa6.52□□□□□ -1.37
RNU1-140P-201ENST00000365040 RASEFQ8IZ41 740 aa6.52□□□□□ -1.37
RNU1-140P-201ENST00000365040 PIP4P2Q8N4L2 257 aa6.52□□□□□ -1.37
RNU1-140P-201ENST00000365040 RGL2O15211 777 aa6.51□□□□□ -1.37
RNU1-140P-201ENST00000365040 ZCCHC6Q5VYS8 1495 aaKnown RBP6.51□□□□□ -1.37
RNU1-140P-201ENST00000365040 RIOK3O14730 519 aaKnown RBP6.49□□□□□ -1.37
RNU1-140P-201ENST00000365040 VGFO15240 615 aaPredicted RBP6.48□□□□□ -1.37
RNU1-140P-201ENST00000365040 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.48□□□□□ -1.37
RNU1-140P-201ENST00000365040 SCRIBQ14160 1630 aa6.47□□□□□ -1.37
RNU1-140P-201ENST00000365040 ZNF467Q7Z7K2 595 aaPredicted RBP6.47□□□□□ -1.37
RNU1-140P-201ENST00000365040 HS6ST3Q8IZP7 471 aa6.47□□□□□ -1.37
RNU1-140P-201ENST00000365040 BBXQ8WY36 941 aaPredicted RBP6.47□□□□□ -1.37
RNU1-140P-201ENST00000365040 SGIP1Q9BQI5 828 aa6.47□□□□□ -1.37
RNU1-140P-201ENST00000365040 PLCB2Q00722 1185 aa6.46□□□□□ -1.38
RNU1-140P-201ENST00000365040 DNAJC5Q9H3Z4 198 aa6.46□□□□□ -1.38
RNU1-140P-201ENST00000365040 RNF25Q96BH1 459 aaPredicted RBP6.44□□□□□ -1.38
RNU1-140P-201ENST00000365040 TSPYL2Q9H2G4 693 aaPredicted RBP6.44□□□□□ -1.38
RNU1-140P-201ENST00000365040 CCDC61Q9Y6R9 512 aa6.44□□□□□ -1.38
RNU1-140P-201ENST00000365040 CHGAP10645 457 aaKnown RBP6.42□□□□□ -1.38
RNU1-140P-201ENST00000365040 PYGBP11216 843 aa6.42□□□□□ -1.38
RNU1-140P-201ENST00000365040 ZNF579Q8NAF0 562 aaKnown RBP6.42□□□□□ -1.38
RNU1-140P-201ENST00000365040 RYDENQ9NUL5 291 aaKnown RBP6.41□□□□□ -1.38
RNU1-140P-201ENST00000365040 CUX2O14529 1486 aa6.41□□□□□ -1.38
RNU1-140P-201ENST00000365040 CD44P16070 742 aaKnown RBP6.4□□□□□ -1.38
RNU1-140P-201ENST00000365040 CLCN6P51797 869 aa6.4□□□□□ -1.38
RNU1-140P-201ENST00000365040 PDAP1Q13442 181 aaKnown RBP6.39□□□□□ -1.39
RNU1-140P-201ENST00000365040 STK25O00506 426 aa6.38□□□□□ -1.39
RNU1-140P-201ENST00000365040 C19orf67A6NJJ6 358 aa6.37□□□□□ -1.39
RNU1-140P-201ENST00000365040 ZRANB1Q9UGI0 708 aa6.37□□□□□ -1.39
RNU1-140P-201ENST00000365040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.36□□□□□ -1.39
RNU1-140P-201ENST00000365040 SPRYD3Q8NCJ5 442 aa6.36□□□□□ -1.39
RNU1-140P-201ENST00000365040 ZFP91Q96JP5 570 aaPredicted RBP6.36□□□□□ -1.39
RNU1-140P-201ENST00000365040 PCDHB13Q9Y5F0 798 aa6.36□□□□□ -1.39
RNU1-140P-201ENST00000365040 KIF12Q96FN5 646 aa6.35□□□□□ -1.39
RNU1-140P-201ENST00000365040 BCL11BQ9C0K0 894 aaPredicted RBP6.34□□□□□ -1.39
RNU1-140P-201ENST00000365040 STK24Q9Y6E0 443 aa6.34□□□□□ -1.39
RNU1-140P-201ENST00000365040 PAXIP1Q6ZW49 1069 aaPredicted RBP6.33□□□□□ -1.4
RNU1-140P-201ENST00000365040 PSEN1P49768 467 aa6.32□□□□□ -1.4
RNU1-140P-201ENST00000365040 HAP1P54257 671 aaPredicted RBP6.32□□□□□ -1.4
RNU1-140P-201ENST00000365040 ERCC6Q03468 1493 aa6.31□□□□□ -1.4
RNU1-140P-201ENST00000365040 MAP3K13O43283 966 aa6.31□□□□□ -1.4
RNU1-140P-201ENST00000365040 CFAP44Q96MT7 982 aa6.31□□□□□ -1.4
RNU1-140P-201ENST00000365040 IFNL1Q8IU54 200 aa6.3□□□□□ -1.4
RNU1-140P-201ENST00000365040 VSIG10Q8N0Z9 540 aa6.3□□□□□ -1.4
RNU1-140P-201ENST00000365040 PCDHB8Q9UN66 801 aa6.29□□□□□ -1.4
RNU1-140P-201ENST00000365040 PHF12Q96QT6 1004 aa6.28□□□□□ -1.4
RNU1-140P-201ENST00000365040 HMGXB3Q12766 1538 aa6.28□□□□□ -1.4
RNU1-140P-201ENST00000365040 TIE1P35590 1138 aa6.27□□□□□ -1.41
RNU1-140P-201ENST00000365040 SMARCA2P51531 1590 aa6.27□□□□□ -1.41
RNU1-140P-201ENST00000365040 HAX1O00165 279 aa6.26□□□□□ -1.41
RNU1-140P-201ENST00000365040 NKX1-1Q15270 411 aaPredicted RBP6.26□□□□□ -1.41
RNU1-140P-201ENST00000365040 NCAPD3P42695 1498 aa6.26□□□□□ -1.41
RNU1-140P-201ENST00000365040 SOX12O15370 315 aa6.25□□□□□ -1.41
RNU1-140P-201ENST00000365040 GTPBP6O43824 516 aaPredicted RBP6.25□□□□□ -1.41
RNU1-140P-201ENST00000365040 MS4A3Q96HJ5 214 aa6.25□□□□□ -1.41
RNU1-140P-201ENST00000365040 GOLGA2Q08379 1002 aa6.24□□□□□ -1.41
RNU1-140P-201ENST00000365040 NLRP6P59044 892 aa6.23□□□□□ -1.41
RNU1-140P-201ENST00000365040 LAMC3Q9Y6N6 1575 aa6.23□□□□□ -1.41
RNU1-140P-201ENST00000365040 POTEHQ6S545 545 aa6.22□□□□□ -1.41
RNU1-140P-201ENST00000365040 CABP2Q9NPB3 220 aa6.22□□□□□ -1.41
RNU1-140P-201ENST00000365040 THOC2Q8NI27 1593 aaKnown RBP6.22□□□□□ -1.41
RNU1-140P-201ENST00000365040 SMARCA4P51532 1647 aa6.21□□□□□ -1.41
RNU1-140P-201ENST00000365040 TMEM106CQ9BVX2 250 aa6.21□□□□□ -1.42
RNU1-140P-201ENST00000365040 MKRN3Q13064 507 aaKnown RBP6.2□□□□□ -1.42
RNU1-140P-201ENST00000365040 MFRPQ9BY79 579 aa6.2□□□□□ -1.42
RNU1-140P-201ENST00000365040 ATAD2BQ9ULI0 1458 aa6.19□□□□□ -1.42
RNU1-140P-201ENST00000365040 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
RNU1-140P-201ENST00000365040 TTLL13PA6NNM8 815 aa6.18□□□□□ -1.42
RNU1-140P-201ENST00000365040 EFCAB3Q8N7B9 438 aa6.18□□□□□ -1.42
RNU1-140P-201ENST00000365040 BAZ1AQ9NRL2 1556 aaPredicted RBP6.18□□□□□ -1.42
RNU1-140P-201ENST00000365040 GALR2O43603 387 aaPredicted RBP6.17□□□□□ -1.42
RNU1-140P-201ENST00000365040 FBXO22Q8NEZ5 403 aa6.17□□□□□ -1.42
RNU1-140P-201ENST00000365040 BMP2KQ9NSY1 1161 aaPredicted RBP6.17□□□□□ -1.42
RNU1-140P-201ENST00000365040 BAZ1BQ9UIG0 1483 aaKnown RBP6.16□□□□□ -1.42
RNU1-140P-201ENST00000365040 IER5LQ5T953 404 aa6.16□□□□□ -1.42
RNU1-140P-201ENST00000365040 TSHZ2Q9NRE2 1034 aa6.16□□□□□ -1.42
RNU1-140P-201ENST00000365040 KIF21AQ7Z4S6 1674 aa6.16□□□□□ -1.42
RNU1-140P-201ENST00000365040 ASTLQ6HA08 431 aaPredicted RBP6.15□□□□□ -1.42
RNU1-140P-201ENST00000365040 ILDR1Q86SU0 546 aaPredicted RBP6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 BCANQ96GW7 911 aa6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 PHF8Q9UPP1 1060 aa6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 TRPC6Q9Y210 931 aa6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 PDS5BQ9NTI5 1447 aa6.14□□□□□ -1.43
RNU1-140P-201ENST00000365040 P3H3Q8IVL6 736 aa6.13□□□□□ -1.43
RNU1-140P-201ENST00000365040 EVX2Q03828 476 aa6.12□□□□□ -1.43
RNU1-140P-201ENST00000365040 NESP48681 1621 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms