RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 POTEB2H3BUK9 544 aa7.49□□□□□ -1.21
RNU4-56P-201ENST00000364700 ATMINO43313 823 aaPredicted RBP7.49□□□□□ -1.21
RNU4-56P-201ENST00000364700 C7P10643 843 aa7.49□□□□□ -1.21
RNU4-56P-201ENST00000364700 MIER1Q8N108 512 aa7.48□□□□□ -1.21
RNU4-56P-201ENST00000364700 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
RNU4-56P-201ENST00000364700 KIF12Q96FN5 646 aa7.47□□□□□ -1.21
RNU4-56P-201ENST00000364700 METRNQ9UJH8 293 aa7.47□□□□□ -1.21
RNU4-56P-201ENST00000364700 MAMSTRQ6ZN01 415 aa7.42□□□□□ -1.22
RNU4-56P-201ENST00000364700 RASEFQ8IZ41 740 aa7.42□□□□□ -1.22
RNU4-56P-201ENST00000364700 ZBTB47Q9UFB7 747 aaPredicted RBP7.42□□□□□ -1.22
RNU4-56P-201ENST00000364700 ATN1P54259 1190 aaPredicted RBP7.41□□□□□ -1.22
RNU4-56P-201ENST00000364700 PLCD3Q8N3E9 789 aa7.41□□□□□ -1.22
RNU4-56P-201ENST00000364700 MAP3K13O43283 966 aa7.4□□□□□ -1.22
RNU4-56P-201ENST00000364700 TIE1P35590 1138 aa7.4□□□□□ -1.22
RNU4-56P-201ENST00000364700 BMP2KQ9NSY1 1161 aaPredicted RBP7.39□□□□□ -1.23
RNU4-56P-201ENST00000364700 POTEJP0CG39 1038 aa7.38□□□□□ -1.23
RNU4-56P-201ENST00000364700 SGIP1Q9BQI5 828 aa7.38□□□□□ -1.23
RNU4-56P-201ENST00000364700 TRPC6Q9Y210 931 aa7.36□□□□□ -1.23
RNU4-56P-201ENST00000364700 NUBP1P53384 320 aa7.35□□□□□ -1.23
RNU4-56P-201ENST00000364700 SCUBE2Q9NQ36 999 aa7.34□□□□□ -1.23
RNU4-56P-201ENST00000364700 POTEMA6NI47 508 aa7.33□□□□□ -1.24
RNU4-56P-201ENST00000364700 TTLL13PA6NNM8 815 aa7.33□□□□□ -1.24
RNU4-56P-201ENST00000364700 POTEFA5A3E0 1075 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 FKBP8Q14318 412 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 IER5LQ5T953 404 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 PLSCR2Q9NRY7 297 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 PCDHB13Q9Y5F0 798 aa7.32□□□□□ -1.24
RNU4-56P-201ENST00000364700 POTEGQ6S5H5 508 aa7.31□□□□□ -1.24
RNU4-56P-201ENST00000364700 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
RNU4-56P-201ENST00000364700 SEC24BO95487 1268 aa7.29□□□□□ -1.24
RNU4-56P-201ENST00000364700 FBXO3Q9UK99 471 aa7.28□□□□□ -1.24
RNU4-56P-201ENST00000364700 TRIM35Q9UPQ4 493 aa7.28□□□□□ -1.24
RNU4-56P-201ENST00000364700 COLQQ9Y215 455 aaPredicted RBP7.28□□□□□ -1.24
RNU4-56P-201ENST00000364700 IFNL1Q8IU54 200 aa7.27□□□□□ -1.25
RNU4-56P-201ENST00000364700 TMEM106CQ9BVX2 250 aa7.24□□□□□ -1.25
RNU4-56P-201ENST00000364700 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
RNU4-56P-201ENST00000364700 FAM163AQ96GL9 167 aaPredicted RBP7.23□□□□□ -1.25
RNU4-56P-201ENST00000364700 DCAF8Q5TAQ9 597 aa7.21□□□□□ -1.26
RNU4-56P-201ENST00000364700 PLCG2P16885 1265 aa7.19□□□□□ -1.26
RNU4-56P-201ENST00000364700 IRX5P78411 483 aaPredicted RBP7.18□□□□□ -1.26
RNU4-56P-201ENST00000364700 PYGBP11216 843 aa7.17□□□□□ -1.26
RNU4-56P-201ENST00000364700 OCEL1Q9H607 264 aa7.16□□□□□ -1.26
RNU4-56P-201ENST00000364700 VASPP50552 380 aaPredicted RBP7.15□□□□□ -1.26
RNU4-56P-201ENST00000364700 GSE1Q14687 1217 aa7.15□□□□□ -1.26
RNU4-56P-201ENST00000364700 SLAIN1Q8ND83 568 aa7.14□□□□□ -1.27
RNU4-56P-201ENST00000364700 CHRM1P11229 460 aaPredicted RBP7.13□□□□□ -1.27
RNU4-56P-201ENST00000364700 ZNF467Q7Z7K2 595 aaPredicted RBP7.13□□□□□ -1.27
RNU4-56P-201ENST00000364700 KLHL34Q8N239 644 aa7.13□□□□□ -1.27
RNU4-56P-201ENST00000364700 PCDHB8Q9UN66 801 aa7.13□□□□□ -1.27
RNU4-56P-201ENST00000364700 ST18O60284 1047 aa7.09□□□□□ -1.27
RNU4-56P-201ENST00000364700 SNPHO15079 494 aa7.08□□□□□ -1.28
RNU4-56P-201ENST00000364700 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.08□□□□□ -1.28
RNU4-56P-201ENST00000364700 CDAN1Q8IWY9 1227 aa7.07□□□□□ -1.28
RNU4-56P-201ENST00000364700 TMEM121BQ9BXQ6 578 aaPredicted RBP7.07□□□□□ -1.28
RNU4-56P-201ENST00000364700 GOLGA2Q08379 1002 aa7.06□□□□□ -1.28
RNU4-56P-201ENST00000364700 PDCD7Q8N8D1 485 aaKnown RBP7.06□□□□□ -1.28
RNU4-56P-201ENST00000364700 MKRN3Q13064 507 aaKnown RBP7.05□□□□□ -1.28
RNU4-56P-201ENST00000364700 PSEN1P49768 467 aa7.04□□□□□ -1.28
RNU4-56P-201ENST00000364700 L3MBTL3Q96JM7 780 aaPredicted RBP7.04□□□□□ -1.28
RNU4-56P-201ENST00000364700 PDAP1Q13442 181 aaKnown RBP7.03□□□□□ -1.28
RNU4-56P-201ENST00000364700 SPOCK2Q92563 424 aa7.03□□□□□ -1.28
RNU4-56P-201ENST00000364700 C3orf67Q6ZVT6 689 aa7.01□□□□□ -1.29
RNU4-56P-201ENST00000364700 ILDR1Q86SU0 546 aaPredicted RBP7.01□□□□□ -1.29
RNU4-56P-201ENST00000364700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.01□□□□□ -1.29
RNU4-56P-201ENST00000364700 IFNLR1Q8IU57 520 aaPredicted RBP7□□□□□ -1.29
RNU4-56P-201ENST00000364700 CIZ1Q9ULV3 898 aaPredicted RBP6.97□□□□□ -1.29
RNU4-56P-201ENST00000364700 TRIM41Q8WV44 630 aa6.95□□□□□ -1.3
RNU4-56P-201ENST00000364700 MARVELD3Q96A59 401 aa6.93□□□□□ -1.3
RNU4-56P-201ENST00000364700 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
RNU4-56P-201ENST00000364700 G3V3G9 751 aa6.91□□□□□ -1.3
RNU4-56P-201ENST00000364700 EMP3P54852 163 aa6.91□□□□□ -1.3
RNU4-56P-201ENST00000364700 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
RNU4-56P-201ENST00000364700 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
RNU4-56P-201ENST00000364700 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
RNU4-56P-201ENST00000364700 MMRN1Q13201 1228 aa6.89□□□□□ -1.31
RNU4-56P-201ENST00000364700 HOXB3P14651 431 aaPredicted RBP6.86□□□□□ -1.31
RNU4-56P-201ENST00000364700 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
RNU4-56P-201ENST00000364700 EFCAB3Q8N7B9 438 aa6.84□□□□□ -1.31
RNU4-56P-201ENST00000364700 POTEB3A0JP26 581 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 FAM205CA6NFA0 338 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 RIOK3O14730 519 aaKnown RBP6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 DOK7Q18PE1 504 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 POTEBQ6S5H4 581 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
RNU4-56P-201ENST00000364700 SOX12O15370 315 aa6.82□□□□□ -1.32
RNU4-56P-201ENST00000364700 HOXB1P14653 301 aaPredicted RBP6.82□□□□□ -1.32
RNU4-56P-201ENST00000364700 ZNF710Q8N1W2 664 aa6.82□□□□□ -1.32
RNU4-56P-201ENST00000364700 RIMBP2O15034 1052 aa6.8□□□□□ -1.32
RNU4-56P-201ENST00000364700 VGFO15240 615 aaPredicted RBP6.79□□□□□ -1.32
RNU4-56P-201ENST00000364700 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
RNU4-56P-201ENST00000364700 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
RNU4-56P-201ENST00000364700 ZSWIM6Q9HCJ5 1215 aa6.78□□□□□ -1.32
RNU4-56P-201ENST00000364700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.77□□□□□ -1.33
RNU4-56P-201ENST00000364700 ZFP91Q96JP5 570 aaPredicted RBP6.77□□□□□ -1.33
RNU4-56P-201ENST00000364700 RTN4Q9NQC3 1192 aaKnown RBP6.77□□□□□ -1.33
RNU4-56P-201ENST00000364700 ERBB3P21860 1342 aa6.76□□□□□ -1.33
RNU4-56P-201ENST00000364700 TMEM92Q6UXU6 159 aa6.75□□□□□ -1.33
RNU4-56P-201ENST00000364700 MS4A4AQ96JQ5 239 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms