RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
RNU6-553P-201ENST00000364047 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
RNU6-553P-201ENST00000364047 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
RNU6-553P-201ENST00000364047 GSE1Q14687 1217 aa12.3□□□□□ -0.44
RNU6-553P-201ENST00000364047 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
RNU6-553P-201ENST00000364047 GABBR2O75899 941 aa12.26□□□□□ -0.45
RNU6-553P-201ENST00000364047 CLCN6P51797 869 aa12.24□□□□□ -0.45
RNU6-553P-201ENST00000364047 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
RNU6-553P-201ENST00000364047 PYGBP11216 843 aa12.21□□□□□ -0.45
RNU6-553P-201ENST00000364047 MAP3K13O43283 966 aa12.19□□□□□ -0.46
RNU6-553P-201ENST00000364047 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
RNU6-553P-201ENST00000364047 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
RNU6-553P-201ENST00000364047 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
RNU6-553P-201ENST00000364047 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
RNU6-553P-201ENST00000364047 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
RNU6-553P-201ENST00000364047 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
RNU6-553P-201ENST00000364047 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
RNU6-553P-201ENST00000364047 PKD2Q13563 968 aa12.07□□□□□ -0.48
RNU6-553P-201ENST00000364047 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
RNU6-553P-201ENST00000364047 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
RNU6-553P-201ENST00000364047 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
RNU6-553P-201ENST00000364047 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
RNU6-553P-201ENST00000364047 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
RNU6-553P-201ENST00000364047 POTEIP0CG38 1075 aa12□□□□□ -0.49
RNU6-553P-201ENST00000364047 TIE1P35590 1138 aa11.98□□□□□ -0.49
RNU6-553P-201ENST00000364047 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
RNU6-553P-201ENST00000364047 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
RNU6-553P-201ENST00000364047 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
RNU6-553P-201ENST00000364047 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
RNU6-553P-201ENST00000364047 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
RNU6-553P-201ENST00000364047 TMEM106CQ9BVX2 250 aa11.95□□□□□ -0.5
RNU6-553P-201ENST00000364047 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
RNU6-553P-201ENST00000364047 PDAP1Q13442 181 aaKnown RBP11.93□□□□□ -0.5
RNU6-553P-201ENST00000364047 RGL2O15211 777 aa11.92□□□□□ -0.5
RNU6-553P-201ENST00000364047 PSEN1P49768 467 aa11.92□□□□□ -0.5
RNU6-553P-201ENST00000364047 ATN1P54259 1190 aaPredicted RBP11.91□□□□□ -0.5
RNU6-553P-201ENST00000364047 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
RNU6-553P-201ENST00000364047 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
RNU6-553P-201ENST00000364047 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
RNU6-553P-201ENST00000364047 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
RNU6-553P-201ENST00000364047 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
RNU6-553P-201ENST00000364047 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
RNU6-553P-201ENST00000364047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
RNU6-553P-201ENST00000364047 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
RNU6-553P-201ENST00000364047 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
RNU6-553P-201ENST00000364047 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
RNU6-553P-201ENST00000364047 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
RNU6-553P-201ENST00000364047 C7P10643 843 aa11.79□□□□□ -0.52
RNU6-553P-201ENST00000364047 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
RNU6-553P-201ENST00000364047 STK25O00506 426 aa11.76□□□□□ -0.53
RNU6-553P-201ENST00000364047 IER5LQ5T953 404 aa11.76□□□□□ -0.53
RNU6-553P-201ENST00000364047 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
RNU6-553P-201ENST00000364047 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
RNU6-553P-201ENST00000364047 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
RNU6-553P-201ENST00000364047 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
RNU6-553P-201ENST00000364047 SEC24BO95487 1268 aa11.72□□□□□ -0.53
RNU6-553P-201ENST00000364047 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
RNU6-553P-201ENST00000364047 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
RNU6-553P-201ENST00000364047 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
RNU6-553P-201ENST00000364047 PLCG2P16885 1265 aa11.68□□□□□ -0.54
RNU6-553P-201ENST00000364047 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
RNU6-553P-201ENST00000364047 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
RNU6-553P-201ENST00000364047 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
RNU6-553P-201ENST00000364047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNU6-553P-201ENST00000364047 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
RNU6-553P-201ENST00000364047 LHX8Q68G74 356 aa11.64□□□□□ -0.55
RNU6-553P-201ENST00000364047 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
RNU6-553P-201ENST00000364047 SOX12O15370 315 aa11.61□□□□□ -0.55
RNU6-553P-201ENST00000364047 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
RNU6-553P-201ENST00000364047 ILDR1Q86SU0 546 aaPredicted RBP11.58□□□□□ -0.56
RNU6-553P-201ENST00000364047 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
RNU6-553P-201ENST00000364047 NLRP6P59044 892 aa11.55□□□□□ -0.56
RNU6-553P-201ENST00000364047 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
RNU6-553P-201ENST00000364047 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
RNU6-553P-201ENST00000364047 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
RNU6-553P-201ENST00000364047 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
RNU6-553P-201ENST00000364047 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
RNU6-553P-201ENST00000364047 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
RNU6-553P-201ENST00000364047 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
RNU6-553P-201ENST00000364047 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
RNU6-553P-201ENST00000364047 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
RNU6-553P-201ENST00000364047 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
RNU6-553P-201ENST00000364047 G3V3G9 751 aa11.47□□□□□ -0.57
RNU6-553P-201ENST00000364047 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
RNU6-553P-201ENST00000364047 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
RNU6-553P-201ENST00000364047 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
RNU6-553P-201ENST00000364047 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
RNU6-553P-201ENST00000364047 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
RNU6-553P-201ENST00000364047 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
RNU6-553P-201ENST00000364047 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
RNU6-553P-201ENST00000364047 PPP1R37O75864 691 aa11.38□□□□□ -0.59
RNU6-553P-201ENST00000364047 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
RNU6-553P-201ENST00000364047 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
RNU6-553P-201ENST00000364047 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
RNU6-553P-201ENST00000364047 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
RNU6-553P-201ENST00000364047 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
RNU6-553P-201ENST00000364047 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
RNU6-553P-201ENST00000364047 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
RNU6-553P-201ENST00000364047 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
RNU6-553P-201ENST00000364047 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms