RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
RNU4-1-201ENST00000363925 POTEHQ6S545 545 aa9.33□□□□□ -0.92
RNU4-1-201ENST00000363925 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
RNU4-1-201ENST00000363925 PYGBP11216 843 aa9.29□□□□□ -0.92
RNU4-1-201ENST00000363925 PKD2Q13563 968 aa9.29□□□□□ -0.92
RNU4-1-201ENST00000363925 TRIM41Q8WV44 630 aa9.26□□□□□ -0.93
RNU4-1-201ENST00000363925 C19orf67A6NJJ6 358 aa9.24□□□□□ -0.93
RNU4-1-201ENST00000363925 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
RNU4-1-201ENST00000363925 CCDC61Q9Y6R9 512 aa9.21□□□□□ -0.94
RNU4-1-201ENST00000363925 RGL2O15211 777 aa9.2□□□□□ -0.94
RNU4-1-201ENST00000363925 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
RNU4-1-201ENST00000363925 EVX2Q03828 476 aa9.16□□□□□ -0.94
RNU4-1-201ENST00000363925 MAP3K13O43283 966 aa9.15□□□□□ -0.94
RNU4-1-201ENST00000363925 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.94
RNU4-1-201ENST00000363925 RIOK3O14730 519 aaKnown RBP9.14□□□□□ -0.95
RNU4-1-201ENST00000363925 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
RNU4-1-201ENST00000363925 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
RNU4-1-201ENST00000363925 ZNF467Q7Z7K2 595 aaPredicted RBP9.13□□□□□ -0.95
RNU4-1-201ENST00000363925 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
RNU4-1-201ENST00000363925 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
RNU4-1-201ENST00000363925 RNF25Q96BH1 459 aaPredicted RBP9.11□□□□□ -0.95
RNU4-1-201ENST00000363925 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
RNU4-1-201ENST00000363925 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
RNU4-1-201ENST00000363925 CHGAP10645 457 aaKnown RBP9.09□□□□□ -0.95
RNU4-1-201ENST00000363925 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
RNU4-1-201ENST00000363925 STK25O00506 426 aa9.06□□□□□ -0.96
RNU4-1-201ENST00000363925 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
RNU4-1-201ENST00000363925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
RNU4-1-201ENST00000363925 PDAP1Q13442 181 aaKnown RBP9.05□□□□□ -0.96
RNU4-1-201ENST00000363925 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
RNU4-1-201ENST00000363925 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
RNU4-1-201ENST00000363925 PSEN1P49768 467 aa9.04□□□□□ -0.96
RNU4-1-201ENST00000363925 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
RNU4-1-201ENST00000363925 GABBR2O75899 941 aa9.02□□□□□ -0.97
RNU4-1-201ENST00000363925 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
RNU4-1-201ENST00000363925 BCL11BQ9C0K0 894 aaPredicted RBP9.01□□□□□ -0.97
RNU4-1-201ENST00000363925 CLCN6P51797 869 aa9□□□□□ -0.97
RNU4-1-201ENST00000363925 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
RNU4-1-201ENST00000363925 TMEM106CQ9BVX2 250 aa9□□□□□ -0.97
RNU4-1-201ENST00000363925 TRPC6Q9Y210 931 aa9□□□□□ -0.97
RNU4-1-201ENST00000363925 DCBLD2Q96PD2 775 aa8.99□□□□□ -0.97
RNU4-1-201ENST00000363925 CABP2Q9NPB3 220 aa8.97□□□□□ -0.97
RNU4-1-201ENST00000363925 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
RNU4-1-201ENST00000363925 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
RNU4-1-201ENST00000363925 TIE1P35590 1138 aa8.94□□□□□ -0.98
RNU4-1-201ENST00000363925 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
RNU4-1-201ENST00000363925 BMP2KQ9NSY1 1161 aaPredicted RBP8.93□□□□□ -0.98
RNU4-1-201ENST00000363925 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
RNU4-1-201ENST00000363925 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
RNU4-1-201ENST00000363925 TTLL13PA6NNM8 815 aa8.91□□□□□ -0.98
RNU4-1-201ENST00000363925 PAXIP1Q6ZW49 1069 aaPredicted RBP8.9□□□□□ -0.98
RNU4-1-201ENST00000363925 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
RNU4-1-201ENST00000363925 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
RNU4-1-201ENST00000363925 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
RNU4-1-201ENST00000363925 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
RNU4-1-201ENST00000363925 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
RNU4-1-201ENST00000363925 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
RNU4-1-201ENST00000363925 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
RNU4-1-201ENST00000363925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -1
RNU4-1-201ENST00000363925 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
RNU4-1-201ENST00000363925 SOX12O15370 315 aa8.81□□□□□ -1
RNU4-1-201ENST00000363925 SEC24BO95487 1268 aa8.81□□□□□ -1
RNU4-1-201ENST00000363925 NLRP6P59044 892 aa8.81□□□□□ -1
RNU4-1-201ENST00000363925 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
RNU4-1-201ENST00000363925 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
RNU4-1-201ENST00000363925 PLCB2Q00722 1185 aa8.79□□□□□ -1
RNU4-1-201ENST00000363925 PLCG2P16885 1265 aa8.78□□□□□ -1
RNU4-1-201ENST00000363925 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
RNU4-1-201ENST00000363925 SLC39A7Q92504 469 aa8.78□□□□□ -1
RNU4-1-201ENST00000363925 MFRPQ9BY79 579 aa8.78□□□□□ -1
RNU4-1-201ENST00000363925 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
RNU4-1-201ENST00000363925 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
RNU4-1-201ENST00000363925 G3V3G9 751 aa8.75□□□□□ -1.01
RNU4-1-201ENST00000363925 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
RNU4-1-201ENST00000363925 METRNQ9UJH8 293 aa8.75□□□□□ -1.01
RNU4-1-201ENST00000363925 IER5LQ5T953 404 aa8.74□□□□□ -1.01
RNU4-1-201ENST00000363925 C7P10643 843 aa8.73□□□□□ -1.01
RNU4-1-201ENST00000363925 OCEL1Q9H607 264 aa8.73□□□□□ -1.01
RNU4-1-201ENST00000363925 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
RNU4-1-201ENST00000363925 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
RNU4-1-201ENST00000363925 PPP1R37O75864 691 aa8.69□□□□□ -1.02
RNU4-1-201ENST00000363925 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
RNU4-1-201ENST00000363925 MS4A4AQ96JQ5 239 aa8.69□□□□□ -1.02
RNU4-1-201ENST00000363925 COLQQ9Y215 455 aaPredicted RBP8.69□□□□□ -1.02
RNU4-1-201ENST00000363925 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
RNU4-1-201ENST00000363925 PDCD7Q8N8D1 485 aaKnown RBP8.66□□□□□ -1.02
RNU4-1-201ENST00000363925 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
RNU4-1-201ENST00000363925 L3MBTL3Q96JM7 780 aaPredicted RBP8.65□□□□□ -1.02
RNU4-1-201ENST00000363925 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
RNU4-1-201ENST00000363925 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
RNU4-1-201ENST00000363925 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
RNU4-1-201ENST00000363925 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
RNU4-1-201ENST00000363925 ILDR1Q86SU0 546 aaPredicted RBP8.59□□□□□ -1.03
RNU4-1-201ENST00000363925 WDR70Q9NW82 654 aa8.56□□□□□ -1.04
RNU4-1-201ENST00000363925 CADPS2Q86UW7 1296 aa8.55□□□□□ -1.04
RNU4-1-201ENST00000363925 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
RNU4-1-201ENST00000363925 TMC2Q8TDI7 906 aa8.54□□□□□ -1.04
RNU4-1-201ENST00000363925 SCUBE2Q9NQ36 999 aa8.54□□□□□ -1.04
RNU4-1-201ENST00000363925 PDE4AP27815 886 aa8.52□□□□□ -1.05
RNU4-1-201ENST00000363925 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms