RNA–Protein interactions for RNA: ENST00000363377.1

RNU6-254P-201, Transcript of RNA, U6 small nuclear 254, pseudogene, humanhuman

BASIC

Gene RNU6-254P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-254P-201ENST00000363377 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
RNU6-254P-201ENST00000363377 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
RNU6-254P-201ENST00000363377 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
RNU6-254P-201ENST00000363377 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
RNU6-254P-201ENST00000363377 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
RNU6-254P-201ENST00000363377 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
RNU6-254P-201ENST00000363377 PROM2Q8N271 834 aa11.54□□□□□ -0.56
RNU6-254P-201ENST00000363377 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
RNU6-254P-201ENST00000363377 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
RNU6-254P-201ENST00000363377 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
RNU6-254P-201ENST00000363377 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
RNU6-254P-201ENST00000363377 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
RNU6-254P-201ENST00000363377 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
RNU6-254P-201ENST00000363377 TIE1P35590 1138 aa11.42□□□□□ -0.58
RNU6-254P-201ENST00000363377 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
RNU6-254P-201ENST00000363377 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
RNU6-254P-201ENST00000363377 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
RNU6-254P-201ENST00000363377 EHMT2Q96KQ7 1210 aa11.39□□□□□ -0.59
RNU6-254P-201ENST00000363377 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
RNU6-254P-201ENST00000363377 MAP3K13O43283 966 aa11.36□□□□□ -0.59
RNU6-254P-201ENST00000363377 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
RNU6-254P-201ENST00000363377 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
RNU6-254P-201ENST00000363377 IER5LQ5T953 404 aa11.31□□□□□ -0.6
RNU6-254P-201ENST00000363377 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
RNU6-254P-201ENST00000363377 MIER1Q8N108 512 aa11.3□□□□□ -0.6
RNU6-254P-201ENST00000363377 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
RNU6-254P-201ENST00000363377 SEC24BO95487 1268 aa11.27□□□□□ -0.61
RNU6-254P-201ENST00000363377 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
RNU6-254P-201ENST00000363377 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
RNU6-254P-201ENST00000363377 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
RNU6-254P-201ENST00000363377 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
RNU6-254P-201ENST00000363377 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
RNU6-254P-201ENST00000363377 NUBP1P53384 320 aa11.15□□□□□ -0.62
RNU6-254P-201ENST00000363377 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
RNU6-254P-201ENST00000363377 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
RNU6-254P-201ENST00000363377 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
RNU6-254P-201ENST00000363377 ST18O60284 1047 aa11.1□□□□□ -0.63
RNU6-254P-201ENST00000363377 PLCG2P16885 1265 aa11.08□□□□□ -0.64
RNU6-254P-201ENST00000363377 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
RNU6-254P-201ENST00000363377 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
RNU6-254P-201ENST00000363377 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
RNU6-254P-201ENST00000363377 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
RNU6-254P-201ENST00000363377 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
RNU6-254P-201ENST00000363377 SNPHO15079 494 aa11.01□□□□□ -0.65
RNU6-254P-201ENST00000363377 MMRN1Q13201 1228 aa10.95□□□□□ -0.66
RNU6-254P-201ENST00000363377 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
RNU6-254P-201ENST00000363377 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
RNU6-254P-201ENST00000363377 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
RNU6-254P-201ENST00000363377 PYGBP11216 843 aa10.86□□□□□ -0.67
RNU6-254P-201ENST00000363377 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
RNU6-254P-201ENST00000363377 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
RNU6-254P-201ENST00000363377 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
RNU6-254P-201ENST00000363377 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
RNU6-254P-201ENST00000363377 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
RNU6-254P-201ENST00000363377 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
RNU6-254P-201ENST00000363377 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
RNU6-254P-201ENST00000363377 CHRM1P11229 460 aaPredicted RBP10.77□□□□□ -0.69
RNU6-254P-201ENST00000363377 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
RNU6-254P-201ENST00000363377 GSE1Q14687 1217 aa10.77□□□□□ -0.69
RNU6-254P-201ENST00000363377 EMP3P54852 163 aa10.75□□□□□ -0.69
RNU6-254P-201ENST00000363377 FKBP8Q14318 412 aa10.75□□□□□ -0.69
RNU6-254P-201ENST00000363377 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
RNU6-254P-201ENST00000363377 ILDR1Q86SU0 546 aaPredicted RBP10.74□□□□□ -0.69
RNU6-254P-201ENST00000363377 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
RNU6-254P-201ENST00000363377 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
RNU6-254P-201ENST00000363377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNU6-254P-201ENST00000363377 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
RNU6-254P-201ENST00000363377 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
RNU6-254P-201ENST00000363377 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
RNU6-254P-201ENST00000363377 PSEN1P49768 467 aa10.67□□□□□ -0.7
RNU6-254P-201ENST00000363377 FAM205CA6NFA0 338 aa10.66□□□□□ -0.7
RNU6-254P-201ENST00000363377 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
RNU6-254P-201ENST00000363377 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
RNU6-254P-201ENST00000363377 VASPP50552 380 aaPredicted RBP10.59□□□□□ -0.71
RNU6-254P-201ENST00000363377 HOXB3P14651 431 aaPredicted RBP10.58□□□□□ -0.72
RNU6-254P-201ENST00000363377 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
RNU6-254P-201ENST00000363377 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
RNU6-254P-201ENST00000363377 G3V3G9 751 aa10.56□□□□□ -0.72
RNU6-254P-201ENST00000363377 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
RNU6-254P-201ENST00000363377 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
RNU6-254P-201ENST00000363377 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
RNU6-254P-201ENST00000363377 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
RNU6-254P-201ENST00000363377 ERBB3P21860 1342 aa10.48□□□□□ -0.73
RNU6-254P-201ENST00000363377 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
RNU6-254P-201ENST00000363377 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
RNU6-254P-201ENST00000363377 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
RNU6-254P-201ENST00000363377 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
RNU6-254P-201ENST00000363377 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
RNU6-254P-201ENST00000363377 PTGER2P43116 358 aa10.39□□□□□ -0.75
RNU6-254P-201ENST00000363377 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
RNU6-254P-201ENST00000363377 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
RNU6-254P-201ENST00000363377 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
RNU6-254P-201ENST00000363377 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
RNU6-254P-201ENST00000363377 IFNLR1Q8IU57 520 aaPredicted RBP10.36□□□□□ -0.75
RNU6-254P-201ENST00000363377 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
RNU6-254P-201ENST00000363377 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
RNU6-254P-201ENST00000363377 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
RNU6-254P-201ENST00000363377 TMEM92Q6UXU6 159 aa10.32□□□□□ -0.76
RNU6-254P-201ENST00000363377 SOX12O15370 315 aa10.31□□□□□ -0.76
RNU6-254P-201ENST00000363377 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms