RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
RNU6-839P-201ENST00000363347 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
RNU6-839P-201ENST00000363347 C7P10643 843 aa11.81□□□□□ -0.52
RNU6-839P-201ENST00000363347 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
RNU6-839P-201ENST00000363347 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
RNU6-839P-201ENST00000363347 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
RNU6-839P-201ENST00000363347 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
RNU6-839P-201ENST00000363347 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
RNU6-839P-201ENST00000363347 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
RNU6-839P-201ENST00000363347 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
RNU6-839P-201ENST00000363347 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
RNU6-839P-201ENST00000363347 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
RNU6-839P-201ENST00000363347 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
RNU6-839P-201ENST00000363347 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
RNU6-839P-201ENST00000363347 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
RNU6-839P-201ENST00000363347 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
RNU6-839P-201ENST00000363347 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
RNU6-839P-201ENST00000363347 TIE1P35590 1138 aa11.51□□□□□ -0.57
RNU6-839P-201ENST00000363347 MAP3K13O43283 966 aa11.48□□□□□ -0.57
RNU6-839P-201ENST00000363347 SEC24BO95487 1268 aa11.46□□□□□ -0.57
RNU6-839P-201ENST00000363347 PROM2Q8N271 834 aa11.46□□□□□ -0.57
RNU6-839P-201ENST00000363347 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
RNU6-839P-201ENST00000363347 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
RNU6-839P-201ENST00000363347 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
RNU6-839P-201ENST00000363347 FKBP8Q14318 412 aa11.44□□□□□ -0.58
RNU6-839P-201ENST00000363347 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
RNU6-839P-201ENST00000363347 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
RNU6-839P-201ENST00000363347 IER5LQ5T953 404 aa11.39□□□□□ -0.59
RNU6-839P-201ENST00000363347 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
RNU6-839P-201ENST00000363347 MIER1Q8N108 512 aa11.34□□□□□ -0.59
RNU6-839P-201ENST00000363347 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
RNU6-839P-201ENST00000363347 ST18O60284 1047 aa11.32□□□□□ -0.6
RNU6-839P-201ENST00000363347 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
RNU6-839P-201ENST00000363347 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
RNU6-839P-201ENST00000363347 PLCG2P16885 1265 aa11.24□□□□□ -0.61
RNU6-839P-201ENST00000363347 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
RNU6-839P-201ENST00000363347 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
RNU6-839P-201ENST00000363347 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
RNU6-839P-201ENST00000363347 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
RNU6-839P-201ENST00000363347 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
RNU6-839P-201ENST00000363347 TMEM121BQ9BXQ6 578 aaPredicted RBP11.19□□□□□ -0.62
RNU6-839P-201ENST00000363347 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
RNU6-839P-201ENST00000363347 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
RNU6-839P-201ENST00000363347 NUBP1P53384 320 aa11.17□□□□□ -0.62
RNU6-839P-201ENST00000363347 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
RNU6-839P-201ENST00000363347 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RNU6-839P-201ENST00000363347 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
RNU6-839P-201ENST00000363347 SNPHO15079 494 aa11.13□□□□□ -0.63
RNU6-839P-201ENST00000363347 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
RNU6-839P-201ENST00000363347 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
RNU6-839P-201ENST00000363347 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
RNU6-839P-201ENST00000363347 EMP3P54852 163 aa10.99□□□□□ -0.65
RNU6-839P-201ENST00000363347 PYGBP11216 843 aa10.98□□□□□ -0.65
RNU6-839P-201ENST00000363347 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
RNU6-839P-201ENST00000363347 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
RNU6-839P-201ENST00000363347 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
RNU6-839P-201ENST00000363347 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
RNU6-839P-201ENST00000363347 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
RNU6-839P-201ENST00000363347 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
RNU6-839P-201ENST00000363347 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
RNU6-839P-201ENST00000363347 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
RNU6-839P-201ENST00000363347 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
RNU6-839P-201ENST00000363347 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
RNU6-839P-201ENST00000363347 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
RNU6-839P-201ENST00000363347 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
RNU6-839P-201ENST00000363347 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
RNU6-839P-201ENST00000363347 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
RNU6-839P-201ENST00000363347 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
RNU6-839P-201ENST00000363347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.68
RNU6-839P-201ENST00000363347 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
RNU6-839P-201ENST00000363347 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
RNU6-839P-201ENST00000363347 PSEN1P49768 467 aa10.74□□□□□ -0.69
RNU6-839P-201ENST00000363347 GSE1Q14687 1217 aa10.74□□□□□ -0.69
RNU6-839P-201ENST00000363347 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
RNU6-839P-201ENST00000363347 HOXB3P14651 431 aaPredicted RBP10.71□□□□□ -0.69
RNU6-839P-201ENST00000363347 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
RNU6-839P-201ENST00000363347 G3V3G9 751 aa10.69□□□□□ -0.7
RNU6-839P-201ENST00000363347 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
RNU6-839P-201ENST00000363347 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
RNU6-839P-201ENST00000363347 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
RNU6-839P-201ENST00000363347 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
RNU6-839P-201ENST00000363347 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
RNU6-839P-201ENST00000363347 ERBB3P21860 1342 aa10.66□□□□□ -0.7
RNU6-839P-201ENST00000363347 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
RNU6-839P-201ENST00000363347 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
RNU6-839P-201ENST00000363347 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
RNU6-839P-201ENST00000363347 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
RNU6-839P-201ENST00000363347 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
RNU6-839P-201ENST00000363347 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
RNU6-839P-201ENST00000363347 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
RNU6-839P-201ENST00000363347 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
RNU6-839P-201ENST00000363347 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
RNU6-839P-201ENST00000363347 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
RNU6-839P-201ENST00000363347 PTGER2P43116 358 aa10.49□□□□□ -0.73
RNU6-839P-201ENST00000363347 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
RNU6-839P-201ENST00000363347 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
RNU6-839P-201ENST00000363347 PKD2Q13563 968 aa10.43□□□□□ -0.74
RNU6-839P-201ENST00000363347 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
RNU6-839P-201ENST00000363347 TMEM92Q6UXU6 159 aa10.42□□□□□ -0.74
RNU6-839P-201ENST00000363347 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms