RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 ATMINO43313 823 aaPredicted RBP3.66□□□□□ -1.82
RNU4-58P-201ENST00000363192 KIF12Q96FN5 646 aa3.65□□□□□ -1.83
RNU4-58P-201ENST00000363192 POTEFA5A3E0 1075 aa3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 ATN1P54259 1190 aaPredicted RBP3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 RASEFQ8IZ41 740 aa3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 SLC39A7Q92504 469 aa3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 TSPYL2Q9H2G4 693 aaPredicted RBP3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 METRNQ9UJH8 293 aa3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 TRPC6Q9Y210 931 aa3.63□□□□□ -1.83
RNU4-58P-201ENST00000363192 C7P10643 843 aa3.62□□□□□ -1.83
RNU4-58P-201ENST00000363192 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
RNU4-58P-201ENST00000363192 BMP2KQ9NSY1 1161 aaPredicted RBP3.61□□□□□ -1.83
RNU4-58P-201ENST00000363192 MAP3K13O43283 966 aa3.6□□□□□ -1.83
RNU4-58P-201ENST00000363192 POTEMA6NI47 508 aa3.59□□□□□ -1.83
RNU4-58P-201ENST00000363192 TIE1P35590 1138 aa3.59□□□□□ -1.83
RNU4-58P-201ENST00000363192 NUBP1P53384 320 aa3.59□□□□□ -1.83
RNU4-58P-201ENST00000363192 MIER1Q8N108 512 aa3.59□□□□□ -1.83
RNU4-58P-201ENST00000363192 TTLL13PA6NNM8 815 aa3.58□□□□□ -1.84
RNU4-58P-201ENST00000363192 POTEGQ6S5H5 508 aa3.58□□□□□ -1.84
RNU4-58P-201ENST00000363192 PLSCR2Q9NRY7 297 aa3.57□□□□□ -1.84
RNU4-58P-201ENST00000363192 COLQQ9Y215 455 aaPredicted RBP3.57□□□□□ -1.84
RNU4-58P-201ENST00000363192 MAMSTRQ6ZN01 415 aa3.56□□□□□ -1.84
RNU4-58P-201ENST00000363192 SGIP1Q9BQI5 828 aa3.56□□□□□ -1.84
RNU4-58P-201ENST00000363192 IFNL1Q8IU54 200 aa3.55□□□□□ -1.84
RNU4-58P-201ENST00000363192 PLEKHG5O94827 1062 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 IER5LQ5T953 404 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 PLCD3Q8N3E9 789 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 SCUBE2Q9NQ36 999 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 TRIM35Q9UPQ4 493 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 PCDHB13Q9Y5F0 798 aa3.54□□□□□ -1.84
RNU4-58P-201ENST00000363192 FKBP8Q14318 412 aa3.53□□□□□ -1.84
RNU4-58P-201ENST00000363192 PCDH10Q9P2E7 1040 aa3.52□□□□□ -1.85
RNU4-58P-201ENST00000363192 ZBTB47Q9UFB7 747 aaPredicted RBP3.52□□□□□ -1.85
RNU4-58P-201ENST00000363192 SEC24BO95487 1268 aa3.51□□□□□ -1.85
RNU4-58P-201ENST00000363192 IRX5P78411 483 aaPredicted RBP3.51□□□□□ -1.85
RNU4-58P-201ENST00000363192 FAM212AQ96EL1 285 aa3.51□□□□□ -1.85
RNU4-58P-201ENST00000363192 FAM163AQ96GL9 167 aaPredicted RBP3.51□□□□□ -1.85
RNU4-58P-201ENST00000363192 TMEM106CQ9BVX2 250 aa3.51□□□□□ -1.85
RNU4-58P-201ENST00000363192 PYGBP11216 843 aa3.48□□□□□ -1.85
RNU4-58P-201ENST00000363192 PCDHB8Q9UN66 801 aa3.48□□□□□ -1.85
RNU4-58P-201ENST00000363192 ST18O60284 1047 aa3.47□□□□□ -1.85
RNU4-58P-201ENST00000363192 SLAIN1Q8ND83 568 aa3.47□□□□□ -1.85
RNU4-58P-201ENST00000363192 PLCG2P16885 1265 aa3.46□□□□□ -1.86
RNU4-58P-201ENST00000363192 DCAF8Q5TAQ9 597 aa3.46□□□□□ -1.86
RNU4-58P-201ENST00000363192 PDCD7Q8N8D1 485 aaKnown RBP3.46□□□□□ -1.86
RNU4-58P-201ENST00000363192 OCEL1Q9H607 264 aa3.46□□□□□ -1.86
RNU4-58P-201ENST00000363192 VASPP50552 380 aaPredicted RBP3.45□□□□□ -1.86
RNU4-58P-201ENST00000363192 CDAN1Q8IWY9 1227 aa3.45□□□□□ -1.86
RNU4-58P-201ENST00000363192 FBXO3Q9UK99 471 aa3.45□□□□□ -1.86
RNU4-58P-201ENST00000363192 CHRM1P11229 460 aaPredicted RBP3.44□□□□□ -1.86
RNU4-58P-201ENST00000363192 ILDR1Q86SU0 546 aaPredicted RBP3.44□□□□□ -1.86
RNU4-58P-201ENST00000363192 GSE1Q14687 1217 aa3.42□□□□□ -1.86
RNU4-58P-201ENST00000363192 ZNF467Q7Z7K2 595 aaPredicted RBP3.42□□□□□ -1.86
RNU4-58P-201ENST00000363192 IFNLR1Q8IU57 520 aaPredicted RBP3.41□□□□□ -1.86
RNU4-58P-201ENST00000363192 TMEM121BQ9BXQ6 578 aaPredicted RBP3.41□□□□□ -1.86
RNU4-58P-201ENST00000363192 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.41□□□□□ -1.86
RNU4-58P-201ENST00000363192 PSEN1P49768 467 aa3.4□□□□□ -1.87
RNU4-58P-201ENST00000363192 KLHL34Q8N239 644 aa3.4□□□□□ -1.87
RNU4-58P-201ENST00000363192 POTEB3A0JP26 581 aa3.39□□□□□ -1.87
RNU4-58P-201ENST00000363192 DPY19L2Q6NUT2 758 aa3.39□□□□□ -1.87
RNU4-58P-201ENST00000363192 POTEBQ6S5H4 581 aa3.39□□□□□ -1.87
RNU4-58P-201ENST00000363192 SPNS2Q8IVW8 549 aa3.39□□□□□ -1.87
RNU4-58P-201ENST00000363192 SNPHO15079 494 aa3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 MKRN3Q13064 507 aaKnown RBP3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 MMRN1Q13201 1228 aa3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 PDAP1Q13442 181 aaKnown RBP3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 MARVELD3Q96A59 401 aa3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU4-58P-201ENST00000363192 HOXB3P14651 431 aaPredicted RBP3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 C3orf67Q6ZVT6 689 aa3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 SPOCK2Q92563 424 aa3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 L3MBTL3Q96JM7 780 aaPredicted RBP3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
RNU4-58P-201ENST00000363192 GOLGA2Q08379 1002 aa3.36□□□□□ -1.87
RNU4-58P-201ENST00000363192 CABP2Q9NPB3 220 aa3.36□□□□□ -1.87
RNU4-58P-201ENST00000363192 BOLA1Q9Y3E2 137 aa3.35□□□□□ -1.87
RNU4-58P-201ENST00000363192 EMP3P54852 163 aa3.34□□□□□ -1.87
RNU4-58P-201ENST00000363192 HS3ST6Q96QI5 342 aa3.34□□□□□ -1.87
RNU4-58P-201ENST00000363192 CIZ1Q9ULV3 898 aaPredicted RBP3.34□□□□□ -1.87
RNU4-58P-201ENST00000363192 RNF25Q96BH1 459 aaPredicted RBP3.33□□□□□ -1.88
RNU4-58P-201ENST00000363192 FAM205CA6NFA0 338 aa3.32□□□□□ -1.88
RNU4-58P-201ENST00000363192 HOXB1P14653 301 aaPredicted RBP3.32□□□□□ -1.88
RNU4-58P-201ENST00000363192 TMEM92Q6UXU6 159 aa3.32□□□□□ -1.88
RNU4-58P-201ENST00000363192 EFCAB3Q8N7B9 438 aa3.32□□□□□ -1.88
RNU4-58P-201ENST00000363192 MS4A4AQ96JQ5 239 aa3.31□□□□□ -1.88
RNU4-58P-201ENST00000363192 MICALL2Q8IY33 904 aa3.3□□□□□ -1.88
RNU4-58P-201ENST00000363192 TRIM41Q8WV44 630 aa3.3□□□□□ -1.88
RNU4-58P-201ENST00000363192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 RIOK3O14730 519 aaKnown RBP3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 SOX12O15370 315 aa3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 DOK7Q18PE1 504 aa3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 GPR153Q6NV75 609 aa3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 ZFP91Q96JP5 570 aaPredicted RBP3.28□□□□□ -1.88
RNU4-58P-201ENST00000363192 G3V3G9 751 aa3.27□□□□□ -1.89
RNU4-58P-201ENST00000363192 FBXO22Q8NEZ5 403 aa3.27□□□□□ -1.89
RNU4-58P-201ENST00000363192 PHF8Q9UPP1 1060 aa3.27□□□□□ -1.89
RNU4-58P-201ENST00000363192 ERBB3P21860 1342 aa3.26□□□□□ -1.89
RNU4-58P-201ENST00000363192 VGFO15240 615 aaPredicted RBP3.26□□□□□ -1.89
RNU4-58P-201ENST00000363192 VARS2Q5ST30 1063 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms