RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 RASEFQ8IZ41 740 aa7.16□□□□□ -1.26
RNU6-428P-201ENST00000362942 PKD2Q13563 968 aa7.15□□□□□ -1.26
RNU6-428P-201ENST00000362942 TSPYL2Q9H2G4 693 aaPredicted RBP7.14□□□□□ -1.27
RNU6-428P-201ENST00000362942 TAOK2Q9UL54 1235 aa7.13□□□□□ -1.27
RNU6-428P-201ENST00000362942 CD44P16070 742 aaKnown RBP7.12□□□□□ -1.27
RNU6-428P-201ENST00000362942 CHRM1P11229 460 aaPredicted RBP7.11□□□□□ -1.27
RNU6-428P-201ENST00000362942 DCAF8L2P0C7V8 631 aa7.1□□□□□ -1.27
RNU6-428P-201ENST00000362942 ZRANB1Q9UGI0 708 aa7.09□□□□□ -1.27
RNU6-428P-201ENST00000362942 C19orf67A6NJJ6 358 aa7.08□□□□□ -1.28
RNU6-428P-201ENST00000362942 HAX1O00165 279 aa7.07□□□□□ -1.28
RNU6-428P-201ENST00000362942 PYGBP11216 843 aa7.07□□□□□ -1.28
RNU6-428P-201ENST00000362942 CCDC61Q9Y6R9 512 aa7.07□□□□□ -1.28
RNU6-428P-201ENST00000362942 CLCN6P51797 869 aa7.05□□□□□ -1.28
RNU6-428P-201ENST00000362942 ZNF467Q7Z7K2 595 aaPredicted RBP7.05□□□□□ -1.28
RNU6-428P-201ENST00000362942 SGIP1Q9BQI5 828 aa7.05□□□□□ -1.28
RNU6-428P-201ENST00000362942 RIOK3O14730 519 aaKnown RBP7.04□□□□□ -1.28
RNU6-428P-201ENST00000362942 RGL2O15211 777 aa7.03□□□□□ -1.28
RNU6-428P-201ENST00000362942 ZNF579Q8NAF0 562 aaKnown RBP7.02□□□□□ -1.29
RNU6-428P-201ENST00000362942 VGFO15240 615 aaPredicted RBP7.01□□□□□ -1.29
RNU6-428P-201ENST00000362942 PCDHB13Q9Y5F0 798 aa7.01□□□□□ -1.29
RNU6-428P-201ENST00000362942 KIF12Q96FN5 646 aa7□□□□□ -1.29
RNU6-428P-201ENST00000362942 MAP3K13O43283 966 aa6.97□□□□□ -1.29
RNU6-428P-201ENST00000362942 RNF25Q96BH1 459 aaPredicted RBP6.97□□□□□ -1.29
RNU6-428P-201ENST00000362942 PHF12Q96QT6 1004 aa6.97□□□□□ -1.29
RNU6-428P-201ENST00000362942 CHGAP10645 457 aaKnown RBP6.96□□□□□ -1.3
RNU6-428P-201ENST00000362942 PDAP1Q13442 181 aaKnown RBP6.96□□□□□ -1.3
RNU6-428P-201ENST00000362942 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.95□□□□□ -1.3
RNU6-428P-201ENST00000362942 STK25O00506 426 aa6.94□□□□□ -1.3
RNU6-428P-201ENST00000362942 HS6ST3Q8IZP7 471 aa6.94□□□□□ -1.3
RNU6-428P-201ENST00000362942 PCDHB8Q9UN66 801 aa6.94□□□□□ -1.3
RNU6-428P-201ENST00000362942 IFNL1Q8IU54 200 aa6.93□□□□□ -1.3
RNU6-428P-201ENST00000362942 BBXQ8WY36 941 aaPredicted RBP6.93□□□□□ -1.3
RNU6-428P-201ENST00000362942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
RNU6-428P-201ENST00000362942 PSEN1P49768 467 aa6.92□□□□□ -1.3
RNU6-428P-201ENST00000362942 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
RNU6-428P-201ENST00000362942 MS4A3Q96HJ5 214 aa6.91□□□□□ -1.3
RNU6-428P-201ENST00000362942 STK24Q9Y6E0 443 aa6.91□□□□□ -1.3
RNU6-428P-201ENST00000362942 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
RNU6-428P-201ENST00000362942 TIE1P35590 1138 aa6.89□□□□□ -1.31
RNU6-428P-201ENST00000362942 EVX2Q03828 476 aa6.89□□□□□ -1.31
RNU6-428P-201ENST00000362942 GOLGA2Q08379 1002 aa6.89□□□□□ -1.31
RNU6-428P-201ENST00000362942 LHX8Q68G74 356 aa6.89□□□□□ -1.31
RNU6-428P-201ENST00000362942 RYDENQ9NUL5 291 aaKnown RBP6.89□□□□□ -1.31
RNU6-428P-201ENST00000362942 DNAJC5Q9H3Z4 198 aa6.88□□□□□ -1.31
RNU6-428P-201ENST00000362942 GALR2O43603 387 aaPredicted RBP6.86□□□□□ -1.31
RNU6-428P-201ENST00000362942 TMEM106CQ9BVX2 250 aa6.86□□□□□ -1.31
RNU6-428P-201ENST00000362942 GABBR2O75899 941 aa6.85□□□□□ -1.31
RNU6-428P-201ENST00000362942 SPRYD3Q8NCJ5 442 aa6.84□□□□□ -1.31
RNU6-428P-201ENST00000362942 MKRN3Q13064 507 aaKnown RBP6.83□□□□□ -1.32
RNU6-428P-201ENST00000362942 DCBLD2Q96PD2 775 aa6.83□□□□□ -1.32
RNU6-428P-201ENST00000362942 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
RNU6-428P-201ENST00000362942 SOX12O15370 315 aa6.82□□□□□ -1.32
RNU6-428P-201ENST00000362942 PLCB2Q00722 1185 aa6.82□□□□□ -1.32
RNU6-428P-201ENST00000362942 TTLL13PA6NNM8 815 aa6.81□□□□□ -1.32
RNU6-428P-201ENST00000362942 PAXIP1Q6ZW49 1069 aaPredicted RBP6.81□□□□□ -1.32
RNU6-428P-201ENST00000362942 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
RNU6-428P-201ENST00000362942 BMP2KQ9NSY1 1161 aaPredicted RBP6.8□□□□□ -1.32
RNU6-428P-201ENST00000362942 NLRP6P59044 892 aa6.79□□□□□ -1.32
RNU6-428P-201ENST00000362942 ASTLQ6HA08 431 aaPredicted RBP6.79□□□□□ -1.32
RNU6-428P-201ENST00000362942 TRPC6Q9Y210 931 aa6.79□□□□□ -1.32
RNU6-428P-201ENST00000362942 EFCAB3Q8N7B9 438 aa6.78□□□□□ -1.32
RNU6-428P-201ENST00000362942 TRIM35Q9UPQ4 493 aa6.78□□□□□ -1.32
RNU6-428P-201ENST00000362942 ATMINO43313 823 aaPredicted RBP6.77□□□□□ -1.33
RNU6-428P-201ENST00000362942 SLC24A1O60721 1099 aa6.76□□□□□ -1.33
RNU6-428P-201ENST00000362942 IER5LQ5T953 404 aa6.76□□□□□ -1.33
RNU6-428P-201ENST00000362942 ATN1P54259 1190 aaPredicted RBP6.75□□□□□ -1.33
RNU6-428P-201ENST00000362942 NKX1-1Q15270 411 aaPredicted RBP6.75□□□□□ -1.33
RNU6-428P-201ENST00000362942 GTPBP6O43824 516 aaPredicted RBP6.74□□□□□ -1.33
RNU6-428P-201ENST00000362942 HAP1P54257 671 aaPredicted RBP6.74□□□□□ -1.33
RNU6-428P-201ENST00000362942 SLC39A7Q92504 469 aa6.74□□□□□ -1.33
RNU6-428P-201ENST00000362942 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
RNU6-428P-201ENST00000362942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.73□□□□□ -1.33
RNU6-428P-201ENST00000362942 PHF8Q9UPP1 1060 aa6.72□□□□□ -1.33
RNU6-428P-201ENST00000362942 G3V3G9 751 aa6.71□□□□□ -1.34
RNU6-428P-201ENST00000362942 SEC24BO95487 1268 aa6.71□□□□□ -1.34
RNU6-428P-201ENST00000362942 C7P10643 843 aa6.71□□□□□ -1.34
RNU6-428P-201ENST00000362942 PLCG2P16885 1265 aa6.71□□□□□ -1.34
RNU6-428P-201ENST00000362942 OCEL1Q9H607 264 aa6.7□□□□□ -1.34
RNU6-428P-201ENST00000362942 FBXO22Q8NEZ5 403 aa6.69□□□□□ -1.34
RNU6-428P-201ENST00000362942 IRX5P78411 483 aaPredicted RBP6.67□□□□□ -1.34
RNU6-428P-201ENST00000362942 L3MBTL3Q96JM7 780 aaPredicted RBP6.67□□□□□ -1.34
RNU6-428P-201ENST00000362942 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
RNU6-428P-201ENST00000362942 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
RNU6-428P-201ENST00000362942 METRNQ9UJH8 293 aa6.66□□□□□ -1.34
RNU6-428P-201ENST00000362942 POTEIP0CG38 1075 aa6.64□□□□□ -1.35
RNU6-428P-201ENST00000362942 PELP1Q8IZL8 1130 aaKnown RBP6.64□□□□□ -1.35
RNU6-428P-201ENST00000362942 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
RNU6-428P-201ENST00000362942 PDCD7Q8N8D1 485 aaKnown RBP6.62□□□□□ -1.35
RNU6-428P-201ENST00000362942 TSHZ2Q9NRE2 1034 aa6.62□□□□□ -1.35
RNU6-428P-201ENST00000362942 BOLA1Q9Y3E2 137 aa6.62□□□□□ -1.35
RNU6-428P-201ENST00000362942 PPP1R37O75864 691 aa6.61□□□□□ -1.35
RNU6-428P-201ENST00000362942 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
RNU6-428P-201ENST00000362942 PDE4AP27815 886 aa6.59□□□□□ -1.35
RNU6-428P-201ENST00000362942 COLQQ9Y215 455 aaPredicted RBP6.59□□□□□ -1.35
RNU6-428P-201ENST00000362942 DPY19L2Q6NUT2 758 aa6.58□□□□□ -1.36
RNU6-428P-201ENST00000362942 C3orf67Q6ZVT6 689 aa6.58□□□□□ -1.36
RNU6-428P-201ENST00000362942 MICALL2Q8IY33 904 aa6.58□□□□□ -1.36
RNU6-428P-201ENST00000362942 TMEM121BQ9BXQ6 578 aaPredicted RBP6.56□□□□□ -1.36
RNU6-428P-201ENST00000362942 MAMSTRQ6ZN01 415 aa6.55□□□□□ -1.36
RNU6-428P-201ENST00000362942 TMC2Q8TDI7 906 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms