RNA–Protein interactions for RNA: ENST00000361971.9

PLXNB3-201, Transcript of plexin B3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLXNB3, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-201ENST00000361971 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
PLXNB3-201ENST00000361971 CLIP1P30622 1438 aa22.01■■□□□ 1.11
PLXNB3-201ENST00000361971 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
PLXNB3-201ENST00000361971 MRS2Q9HD23 443 aa22■■□□□ 1.11
PLXNB3-201ENST00000361971 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
PLXNB3-201ENST00000361971 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
PLXNB3-201ENST00000361971 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
PLXNB3-201ENST00000361971 ARXQ96QS3 562 aa21.93■■□□□ 1.1
PLXNB3-201ENST00000361971 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
PLXNB3-201ENST00000361971 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
PLXNB3-201ENST00000361971 ANP32BQ92688 251 aaKnown RBP21.92■■□□□ 1.1
PLXNB3-201ENST00000361971 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
PLXNB3-201ENST00000361971 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
PLXNB3-201ENST00000361971 MYH16Q9H6N6 1097 aa21.9■■□□□ 1.1
PLXNB3-201ENST00000361971 LMOD2Q6P5Q4 547 aa21.89■■□□□ 1.09
PLXNB3-201ENST00000361971 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
PLXNB3-201ENST00000361971 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
PLXNB3-201ENST00000361971 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
PLXNB3-201ENST00000361971 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
PLXNB3-201ENST00000361971 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
PLXNB3-201ENST00000361971 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
PLXNB3-201ENST00000361971 MLECQ14165 292 aa21.78■■□□□ 1.08
PLXNB3-201ENST00000361971 POGKQ9P215 609 aa21.77■■□□□ 1.07
PLXNB3-201ENST00000361971 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
PLXNB3-201ENST00000361971 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
PLXNB3-201ENST00000361971 KNSTRNQ9Y448 316 aa21.72■■□□□ 1.07
PLXNB3-201ENST00000361971 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
PLXNB3-201ENST00000361971 NACADO15069 1562 aa21.71■■□□□ 1.07
PLXNB3-201ENST00000361971 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
PLXNB3-201ENST00000361971 LAS1LQ9Y4W2 734 aaKnown RBP21.71■■□□□ 1.07
PLXNB3-201ENST00000361971 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
PLXNB3-201ENST00000361971 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
PLXNB3-201ENST00000361971 NEUROD2Q15784 382 aa21.67■■□□□ 1.06
PLXNB3-201ENST00000361971 NPHP1O15259 732 aa21.67■■□□□ 1.06
PLXNB3-201ENST00000361971 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
PLXNB3-201ENST00000361971 EEA1Q15075 1411 aa21.64■■□□□ 1.05
PLXNB3-201ENST00000361971 MIER1Q8N108 512 aa21.64■■□□□ 1.05
PLXNB3-201ENST00000361971 NBR1Q14596 966 aa21.62■■□□□ 1.05
PLXNB3-201ENST00000361971 MAPK8IP3Q9UPT6 1336 aa21.6■■□□□ 1.05
PLXNB3-201ENST00000361971 CDK11BP21127 795 aaKnown RBP21.58■■□□□ 1.05
PLXNB3-201ENST00000361971 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
PLXNB3-201ENST00000361971 SOX12O15370 315 aa21.57■■□□□ 1.04
PLXNB3-201ENST00000361971 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
PLXNB3-201ENST00000361971 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
PLXNB3-201ENST00000361971 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
PLXNB3-201ENST00000361971 NUDCQ9Y266 331 aa21.53■■□□□ 1.04
PLXNB3-201ENST00000361971 TULP1O00294 542 aaPredicted RBP21.52■■□□□ 1.04
PLXNB3-201ENST00000361971 KANK1Q14678 1352 aa21.52■■□□□ 1.04
PLXNB3-201ENST00000361971 U2SURPO15042 1029 aaKnown RBP21.52■■□□□ 1.03
PLXNB3-201ENST00000361971 SAFB2Q14151 953 aaKnown RBP eCLIP21.52■■□□□ 1.03
PLXNB3-201ENST00000361971 SIN3AQ96ST3 1273 aa21.51■■□□□ 1.03
PLXNB3-201ENST00000361971 EIF5BO60841 1220 aaKnown RBP21.5■■□□□ 1.03
PLXNB3-201ENST00000361971 GGT6Q6P531 493 aa21.49■■□□□ 1.03
PLXNB3-201ENST00000361971 TAOK2Q9UL54 1235 aa21.49■■□□□ 1.03
PLXNB3-201ENST00000361971 TPRNQ4KMQ1 711 aa21.48■■□□□ 1.03
PLXNB3-201ENST00000361971 CUX2O14529 1486 aa21.48■■□□□ 1.03
PLXNB3-201ENST00000361971 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
PLXNB3-201ENST00000361971 HDGFP51858 240 aaKnown RBP21.46■■□□□ 1.03
PLXNB3-201ENST00000361971 SRPK2P78362 688 aaKnown RBP21.46■■□□□ 1.03
PLXNB3-201ENST00000361971 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
PLXNB3-201ENST00000361971 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
PLXNB3-201ENST00000361971 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
PLXNB3-201ENST00000361971 NCLP19338 710 aaKnown RBP21.44■■□□□ 1.02
PLXNB3-201ENST00000361971 CASC1Q6TDU7 716 aa21.43■■□□□ 1.02
PLXNB3-201ENST00000361971 FRAT1Q92837 279 aaPredicted RBP21.43■■□□□ 1.02
PLXNB3-201ENST00000361971 STK26Q9P289 416 aa21.42■■□□□ 1.02
PLXNB3-201ENST00000361971 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
PLXNB3-201ENST00000361971 OS9Q13438 667 aaPredicted RBP21.41■■□□□ 1.02
PLXNB3-201ENST00000361971 BECN1Q14457 450 aa21.4■■□□□ 1.02
PLXNB3-201ENST00000361971 TMF1P82094 1093 aa21.36■■□□□ 1.01
PLXNB3-201ENST00000361971 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
PLXNB3-201ENST00000361971 FHAD1B1AJZ9 1412 aa21.35■■□□□ 1.01
PLXNB3-201ENST00000361971 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
PLXNB3-201ENST00000361971 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
PLXNB3-201ENST00000361971 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
PLXNB3-201ENST00000361971 ZRSR1Q15695 479 aaKnown RBP21.31■■□□□ 1
PLXNB3-201ENST00000361971 DDRGK1Q96HY6 314 aa21.31■■□□□ 1
PLXNB3-201ENST00000361971 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
PLXNB3-201ENST00000361971 MORC1Q86VD1 984 aa21.28■■□□□ 1
PLXNB3-201ENST00000361971 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
PLXNB3-201ENST00000361971 CARMIL2Q6F5E8 1435 aa21.28■■□□□ 1
PLXNB3-201ENST00000361971 NAP1L2Q9ULW6 460 aaPredicted RBP21.27■■□□□ 1
PLXNB3-201ENST00000361971 RGS3P49796 1198 aa21.27■□□□□ 0.99
PLXNB3-201ENST00000361971 SOGA1O94964 1423 aa21.26■□□□□ 0.99
PLXNB3-201ENST00000361971 FOXD1Q16676 465 aa21.25■□□□□ 0.99
PLXNB3-201ENST00000361971 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
PLXNB3-201ENST00000361971 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
PLXNB3-201ENST00000361971 FGD1P98174 961 aa21.24■□□□□ 0.99
PLXNB3-201ENST00000361971 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
PLXNB3-201ENST00000361971 KCNJ4P48050 445 aa21.23■□□□□ 0.99
PLXNB3-201ENST00000361971 PKD2Q13563 968 aa21.23■□□□□ 0.99
PLXNB3-201ENST00000361971 RTF1Q92541 710 aaKnown RBP21.22■□□□□ 0.99
PLXNB3-201ENST00000361971 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
PLXNB3-201ENST00000361971 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
PLXNB3-201ENST00000361971 ZNF330Q9Y3S2 320 aaPredicted RBP21.2■□□□□ 0.98
PLXNB3-201ENST00000361971 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
PLXNB3-201ENST00000361971 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
PLXNB3-201ENST00000361971 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
PLXNB3-201ENST00000361971 EFCAB2Q5VUJ9 269 aa21.16■□□□□ 0.98
PLXNB3-201ENST00000361971 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms