RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
NCKAP1-202ENST00000361354 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
NCKAP1-202ENST00000361354 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
NCKAP1-202ENST00000361354 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
NCKAP1-202ENST00000361354 GOLGA6L1Q8N7Z2 621 aa10.91□□□□□ -0.66
NCKAP1-202ENST00000361354 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
NCKAP1-202ENST00000361354 CLSTN1O94985 981 aa10.89□□□□□ -0.67
NCKAP1-202ENST00000361354 DRC7Q8IY82 874 aa10.88□□□□□ -0.67
NCKAP1-202ENST00000361354 NOP58Q9Y2X3 529 aaKnown RBP10.88□□□□□ -0.67
NCKAP1-202ENST00000361354 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
NCKAP1-202ENST00000361354 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
NCKAP1-202ENST00000361354 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
NCKAP1-202ENST00000361354 HSP90AB1P08238 724 aaKnown RBP10.87□□□□□ -0.67
NCKAP1-202ENST00000361354 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
NCKAP1-202ENST00000361354 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
NCKAP1-202ENST00000361354 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
NCKAP1-202ENST00000361354 PTMSP20962 102 aa10.85□□□□□ -0.67
NCKAP1-202ENST00000361354 FGD1P98174 961 aa10.85□□□□□ -0.67
NCKAP1-202ENST00000361354 A0A0G2JS52 829 aa10.84□□□□□ -0.67
NCKAP1-202ENST00000361354 ARID4BQ4LE39 1312 aaPredicted RBP10.83□□□□□ -0.68
NCKAP1-202ENST00000361354 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
NCKAP1-202ENST00000361354 HSCBQ8IWL3 235 aa10.82□□□□□ -0.68
NCKAP1-202ENST00000361354 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
NCKAP1-202ENST00000361354 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
NCKAP1-202ENST00000361354 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
NCKAP1-202ENST00000361354 CHMP4BQ9H444 224 aaKnown RBP10.8□□□□□ -0.68
NCKAP1-202ENST00000361354 ARID3AQ99856 593 aa10.79□□□□□ -0.68
NCKAP1-202ENST00000361354 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
NCKAP1-202ENST00000361354 KCNJ4P48050 445 aa10.78□□□□□ -0.68
NCKAP1-202ENST00000361354 DEKP35659 375 aaKnown RBP10.77□□□□□ -0.69
NCKAP1-202ENST00000361354 MCCP23508 829 aa10.76□□□□□ -0.69
NCKAP1-202ENST00000361354 NAP1L2Q9ULW6 460 aaPredicted RBP10.75□□□□□ -0.69
NCKAP1-202ENST00000361354 ZNF777Q9ULD5 760 aaPredicted RBP10.75□□□□□ -0.69
NCKAP1-202ENST00000361354 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
NCKAP1-202ENST00000361354 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
NCKAP1-202ENST00000361354 SYAP1Q96A49 352 aaPredicted RBP10.74□□□□□ -0.69
NCKAP1-202ENST00000361354 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
NCKAP1-202ENST00000361354 HSP90AA2PQ14568 343 aaPredicted RBP10.73□□□□□ -0.69
NCKAP1-202ENST00000361354 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
NCKAP1-202ENST00000361354 TPM4P67936 248 aa10.73□□□□□ -0.69
NCKAP1-202ENST00000361354 GBP4Q96PP9 640 aa10.72□□□□□ -0.69
NCKAP1-202ENST00000361354 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
NCKAP1-202ENST00000361354 CFAP53Q96M91 514 aa10.71□□□□□ -0.69
NCKAP1-202ENST00000361354 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.7
NCKAP1-202ENST00000361354 FBLN2P98095 1184 aa10.7□□□□□ -0.7
NCKAP1-202ENST00000361354 CCDC34Q96HJ3 373 aa10.7□□□□□ -0.7
NCKAP1-202ENST00000361354 MS4A1P11836 297 aa10.7□□□□□ -0.7
NCKAP1-202ENST00000361354 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
NCKAP1-202ENST00000361354 RGS3P49796 1198 aa10.69□□□□□ -0.7
NCKAP1-202ENST00000361354 NPHP1O15259 732 aa10.69□□□□□ -0.7
NCKAP1-202ENST00000361354 RRP12Q5JTH9 1297 aaKnown RBP10.67□□□□□ -0.7
NCKAP1-202ENST00000361354 GPS2Q13227 327 aa10.67□□□□□ -0.7
NCKAP1-202ENST00000361354 DCAF1Q9Y4B6 1507 aa10.67□□□□□ -0.7
NCKAP1-202ENST00000361354 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
NCKAP1-202ENST00000361354 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
NCKAP1-202ENST00000361354 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
NCKAP1-202ENST00000361354 GOLGA6L3A6NEY3 463 aa10.66□□□□□ -0.7
NCKAP1-202ENST00000361354 PHF14O94880 888 aa10.66□□□□□ -0.7
NCKAP1-202ENST00000361354 TPM3P06753 285 aa10.66□□□□□ -0.7
NCKAP1-202ENST00000361354 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
NCKAP1-202ENST00000361354 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
NCKAP1-202ENST00000361354 ZBTB7CA1YPR0 619 aa10.64□□□□□ -0.71
NCKAP1-202ENST00000361354 CCDC180Q9P1Z9 1646 aa10.64□□□□□ -0.71
NCKAP1-202ENST00000361354 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
NCKAP1-202ENST00000361354 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
NCKAP1-202ENST00000361354 CCDC70Q6NSX1 233 aa10.63□□□□□ -0.71
NCKAP1-202ENST00000361354 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 APPP05067 770 aa10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 TEX35Q5T0J7 233 aa10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 CSPP1Q1MSJ5 1256 aa10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 NOM1Q5C9Z4 860 aaKnown RBP10.62□□□□□ -0.71
NCKAP1-202ENST00000361354 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
NCKAP1-202ENST00000361354 KIAA1211Q6ZU35 1233 aa10.6□□□□□ -0.71
NCKAP1-202ENST00000361354 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
NCKAP1-202ENST00000361354 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
NCKAP1-202ENST00000361354 ZNF771Q7L3S4 317 aaPredicted RBP10.6□□□□□ -0.71
NCKAP1-202ENST00000361354 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
NCKAP1-202ENST00000361354 PDE4CQ08493 712 aa10.59□□□□□ -0.71
NCKAP1-202ENST00000361354 HMMRO75330 724 aa10.59□□□□□ -0.71
NCKAP1-202ENST00000361354 MIER1Q8N108 512 aa10.58□□□□□ -0.72
NCKAP1-202ENST00000361354 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
NCKAP1-202ENST00000361354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■□□□□ 10.2
NCKAP1-202ENST00000361354 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
NCKAP1-202ENST00000361354 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
NCKAP1-202ENST00000361354 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
NCKAP1-202ENST00000361354 FRAT1Q92837 279 aaPredicted RBP10.57□□□□□ -0.72
NCKAP1-202ENST00000361354 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
NCKAP1-202ENST00000361354 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
NCKAP1-202ENST00000361354 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
NCKAP1-202ENST00000361354 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
NCKAP1-202ENST00000361354 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
NCKAP1-202ENST00000361354 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
NCKAP1-202ENST00000361354 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
NCKAP1-202ENST00000361354 TSR1Q2NL82 804 aaKnown RBP10.54□□□□□ -0.72
NCKAP1-202ENST00000361354 TPM1P09493 284 aa10.54□□□□□ -0.72
NCKAP1-202ENST00000361354 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.72
NCKAP1-202ENST00000361354 MAP7D2Q96T17 732 aa10.52□□□□□ -0.73
NCKAP1-202ENST00000361354 STK11IPQ8N1F8 1099 aa10.52□□□□□ -0.73
NCKAP1-202ENST00000361354 TAF7LQ5H9L4 462 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms