RNA–Protein interactions for RNA: ENST00000359671.5

FN1-206, Transcript of fibronectin 1, humanhuman

TSL 5 BASIC

Gene FN1, Length 8,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-206ENST00000359671 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
FN1-206ENST00000359671 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
FN1-206ENST00000359671 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
FN1-206ENST00000359671 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
FN1-206ENST00000359671 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
FN1-206ENST00000359671 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
FN1-206ENST00000359671 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
FN1-206ENST00000359671 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
FN1-206ENST00000359671 KANK1Q14678 1352 aa15.88■□□□□ 0.13
FN1-206ENST00000359671 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
FN1-206ENST00000359671 GLIPR1L2Q4G1C9 344 aa15.87■□□□□ 0.13
FN1-206ENST00000359671 BECN1Q14457 450 aa15.86■□□□□ 0.13
FN1-206ENST00000359671 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
FN1-206ENST00000359671 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
FN1-206ENST00000359671 CCDC136Q96JN2 1154 aa15.84■□□□□ 0.13
FN1-206ENST00000359671 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
FN1-206ENST00000359671 NCLP19338 710 aaKnown RBP15.8■□□□□ 0.12
FN1-206ENST00000359671 HAP1P54257 671 aaPredicted RBP15.8■□□□□ 0.12
FN1-206ENST00000359671 GOLGA6L22H0YM25 854 aa15.8■□□□□ 0.12
FN1-206ENST00000359671 MS4A1P11836 297 aa15.79■□□□□ 0.12
FN1-206ENST00000359671 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
FN1-206ENST00000359671 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
FN1-206ENST00000359671 ARID4BQ4LE39 1312 aaPredicted RBP15.78■□□□□ 0.12
FN1-206ENST00000359671 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
FN1-206ENST00000359671 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
FN1-206ENST00000359671 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.11
FN1-206ENST00000359671 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
FN1-206ENST00000359671 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
FN1-206ENST00000359671 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
FN1-206ENST00000359671 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
FN1-206ENST00000359671 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
FN1-206ENST00000359671 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
FN1-206ENST00000359671 NUDCQ9Y266 331 aa15.74■□□□□ 0.11
FN1-206ENST00000359671 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
FN1-206ENST00000359671 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
FN1-206ENST00000359671 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
FN1-206ENST00000359671 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
FN1-206ENST00000359671 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.11
FN1-206ENST00000359671 FKBP8Q14318 412 aa15.7■□□□□ 0.1
FN1-206ENST00000359671 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
FN1-206ENST00000359671 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
FN1-206ENST00000359671 FTSJ3Q8IY81 847 aaKnown RBP15.68■□□□□ 0.1
FN1-206ENST00000359671 A0A0G2JS52 829 aa15.67■□□□□ 0.1
FN1-206ENST00000359671 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
FN1-206ENST00000359671 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
FN1-206ENST00000359671 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
FN1-206ENST00000359671 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
FN1-206ENST00000359671 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
FN1-206ENST00000359671 POGKQ9P215 609 aa15.62■□□□□ 0.09
FN1-206ENST00000359671 FMN1Q68DA7 1419 aa15.62■□□□□ 0.09
FN1-206ENST00000359671 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
FN1-206ENST00000359671 TIMELESSQ9UNS1 1208 aa15.6■□□□□ 0.09
FN1-206ENST00000359671 NPHP1O15259 732 aa15.6■□□□□ 0.09
FN1-206ENST00000359671 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
FN1-206ENST00000359671 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
FN1-206ENST00000359671 NRDCO43847 1150 aa15.58■□□□□ 0.09
FN1-206ENST00000359671 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
FN1-206ENST00000359671 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
FN1-206ENST00000359671 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
FN1-206ENST00000359671 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
FN1-206ENST00000359671 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
FN1-206ENST00000359671 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
FN1-206ENST00000359671 CUX2O14529 1486 aa15.55■□□□□ 0.08
FN1-206ENST00000359671 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
FN1-206ENST00000359671 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
FN1-206ENST00000359671 TMF1P82094 1093 aa15.53■□□□□ 0.08
FN1-206ENST00000359671 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
FN1-206ENST00000359671 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
FN1-206ENST00000359671 WIZO95785 1651 aa15.51■□□□□ 0.07
FN1-206ENST00000359671 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
FN1-206ENST00000359671 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
FN1-206ENST00000359671 HDAC5Q9UQL6 1122 aa15.5■□□□□ 0.07
FN1-206ENST00000359671 RSPH4AQ5TD94 716 aa15.49■□□□□ 0.07
FN1-206ENST00000359671 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
FN1-206ENST00000359671 MCCP23508 829 aa15.47■□□□□ 0.07
FN1-206ENST00000359671 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
FN1-206ENST00000359671 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
FN1-206ENST00000359671 ARXQ96QS3 562 aa15.45■□□□□ 0.06
FN1-206ENST00000359671 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
FN1-206ENST00000359671 FGD1P98174 961 aa15.44■□□□□ 0.06
FN1-206ENST00000359671 PTMSP20962 102 aa15.43■□□□□ 0.06
FN1-206ENST00000359671 TMX4Q9H1E5 349 aaPredicted RBP15.43■□□□□ 0.06
FN1-206ENST00000359671 UACAQ9BZF9 1416 aa15.42■□□□□ 0.06
FN1-206ENST00000359671 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
FN1-206ENST00000359671 KCNJ4P48050 445 aa15.4■□□□□ 0.06
FN1-206ENST00000359671 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
FN1-206ENST00000359671 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
FN1-206ENST00000359671 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
FN1-206ENST00000359671 ANKRD30AQ9BXX3 1397 aa15.39■□□□□ 0.05
FN1-206ENST00000359671 PTMAP06454 111 aaKnown RBP15.39■□□□□ 0.05
FN1-206ENST00000359671 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
FN1-206ENST00000359671 SOGA1O94964 1423 aa15.38■□□□□ 0.05
FN1-206ENST00000359671 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
FN1-206ENST00000359671 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
FN1-206ENST00000359671 CCDC34Q96HJ3 373 aa15.36■□□□□ 0.05
FN1-206ENST00000359671 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
FN1-206ENST00000359671 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
FN1-206ENST00000359671 SRPK2P78362 688 aaKnown RBP15.35■□□□□ 0.05
FN1-206ENST00000359671 SPAG9O60271 1321 aaKnown RBP15.34■□□□□ 0.05
FN1-206ENST00000359671 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms