RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
LDLRAD4-201ENST00000359446 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
LDLRAD4-201ENST00000359446 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
LDLRAD4-201ENST00000359446 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
LDLRAD4-201ENST00000359446 BECN1Q14457 450 aa16.79■□□□□ 0.28
LDLRAD4-201ENST00000359446 TRIM44Q96DX7 344 aaPredicted RBP16.78■□□□□ 0.28
LDLRAD4-201ENST00000359446 ZRSR1Q15695 479 aaKnown RBP16.77■□□□□ 0.28
LDLRAD4-201ENST00000359446 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
LDLRAD4-201ENST00000359446 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
LDLRAD4-201ENST00000359446 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
LDLRAD4-201ENST00000359446 TPRNQ4KMQ1 711 aa16.72■□□□□ 0.27
LDLRAD4-201ENST00000359446 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
LDLRAD4-201ENST00000359446 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
LDLRAD4-201ENST00000359446 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD4-201ENST00000359446 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
LDLRAD4-201ENST00000359446 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
LDLRAD4-201ENST00000359446 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
LDLRAD4-201ENST00000359446 NPHP1O15259 732 aa16.68■□□□□ 0.26
LDLRAD4-201ENST00000359446 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
LDLRAD4-201ENST00000359446 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
LDLRAD4-201ENST00000359446 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
LDLRAD4-201ENST00000359446 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
LDLRAD4-201ENST00000359446 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
LDLRAD4-201ENST00000359446 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
LDLRAD4-201ENST00000359446 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
LDLRAD4-201ENST00000359446 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
LDLRAD4-201ENST00000359446 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
LDLRAD4-201ENST00000359446 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
LDLRAD4-201ENST00000359446 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
LDLRAD4-201ENST00000359446 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
LDLRAD4-201ENST00000359446 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
LDLRAD4-201ENST00000359446 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
LDLRAD4-201ENST00000359446 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
LDLRAD4-201ENST00000359446 MIER1Q8N108 512 aa16.56■□□□□ 0.24
LDLRAD4-201ENST00000359446 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
LDLRAD4-201ENST00000359446 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
LDLRAD4-201ENST00000359446 FGD1P98174 961 aa16.53■□□□□ 0.24
LDLRAD4-201ENST00000359446 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
LDLRAD4-201ENST00000359446 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
LDLRAD4-201ENST00000359446 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
LDLRAD4-201ENST00000359446 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-201ENST00000359446 CLIP1P30622 1438 aa16.52■□□□□ 0.23
LDLRAD4-201ENST00000359446 PLCB2Q00722 1185 aa16.52■□□□□ 0.23
LDLRAD4-201ENST00000359446 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
LDLRAD4-201ENST00000359446 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
LDLRAD4-201ENST00000359446 POGKQ9P215 609 aa16.49■□□□□ 0.23
LDLRAD4-201ENST00000359446 KCNJ4P48050 445 aa16.49■□□□□ 0.23
LDLRAD4-201ENST00000359446 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
LDLRAD4-201ENST00000359446 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
LDLRAD4-201ENST00000359446 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
LDLRAD4-201ENST00000359446 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
LDLRAD4-201ENST00000359446 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
LDLRAD4-201ENST00000359446 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
LDLRAD4-201ENST00000359446 CLSTN1O94985 981 aa16.44■□□□□ 0.22
LDLRAD4-201ENST00000359446 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
LDLRAD4-201ENST00000359446 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
LDLRAD4-201ENST00000359446 RGS3P49796 1198 aa16.43■□□□□ 0.22
LDLRAD4-201ENST00000359446 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-201ENST00000359446 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-201ENST00000359446 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
LDLRAD4-201ENST00000359446 NRDCO43847 1150 aa16.4■□□□□ 0.22
LDLRAD4-201ENST00000359446 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-201ENST00000359446 CC2D1BQ5T0F9 858 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-201ENST00000359446 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
LDLRAD4-201ENST00000359446 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
LDLRAD4-201ENST00000359446 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
LDLRAD4-201ENST00000359446 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
LDLRAD4-201ENST00000359446 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
LDLRAD4-201ENST00000359446 SOX12O15370 315 aa16.34■□□□□ 0.21
LDLRAD4-201ENST00000359446 MS4A1P11836 297 aa16.34■□□□□ 0.21
LDLRAD4-201ENST00000359446 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
LDLRAD4-201ENST00000359446 CHAF1AQ13111 956 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD4-201ENST00000359446 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
LDLRAD4-201ENST00000359446 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
LDLRAD4-201ENST00000359446 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
LDLRAD4-201ENST00000359446 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
LDLRAD4-201ENST00000359446 MCCP23508 829 aa16.29■□□□□ 0.2
LDLRAD4-201ENST00000359446 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
LDLRAD4-201ENST00000359446 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
LDLRAD4-201ENST00000359446 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.19
LDLRAD4-201ENST00000359446 KANK1Q14678 1352 aa16.26■□□□□ 0.19
LDLRAD4-201ENST00000359446 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
LDLRAD4-201ENST00000359446 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
LDLRAD4-201ENST00000359446 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
LDLRAD4-201ENST00000359446 MLECQ14165 292 aa16.24■□□□□ 0.19
LDLRAD4-201ENST00000359446 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
LDLRAD4-201ENST00000359446 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
LDLRAD4-201ENST00000359446 TMF1P82094 1093 aa16.23■□□□□ 0.19
LDLRAD4-201ENST00000359446 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
LDLRAD4-201ENST00000359446 EIF4G1Q04637 1599 aaKnown RBP16.23■□□□□ 0.19
LDLRAD4-201ENST00000359446 HDGFP51858 240 aaKnown RBP16.22■□□□□ 0.19
LDLRAD4-201ENST00000359446 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
LDLRAD4-201ENST00000359446 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
LDLRAD4-201ENST00000359446 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
LDLRAD4-201ENST00000359446 L1TD1Q5T7N2 865 aaKnown RBP16.21■□□□□ 0.19
LDLRAD4-201ENST00000359446 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.18
LDLRAD4-201ENST00000359446 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
LDLRAD4-201ENST00000359446 EEA1Q15075 1411 aa16.2■□□□□ 0.18
LDLRAD4-201ENST00000359446 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
LDLRAD4-201ENST00000359446 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms