RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
CTNND1-201ENST00000358694 GOLGA6L22H0YM25 854 aa11.74□□□□□ -0.53
CTNND1-201ENST00000358694 DNTTIP2Q5QJE6 756 aaKnown RBP11.72□□□□□ -0.53
CTNND1-201ENST00000358694 KDM2AQ9Y2K7 1162 aa11.71□□□□□ -0.53
CTNND1-201ENST00000358694 BECN1Q14457 450 aa11.7□□□□□ -0.54
CTNND1-201ENST00000358694 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
CTNND1-201ENST00000358694 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
CTNND1-201ENST00000358694 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
CTNND1-201ENST00000358694 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
CTNND1-201ENST00000358694 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
CTNND1-201ENST00000358694 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
CTNND1-201ENST00000358694 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
CTNND1-201ENST00000358694 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.55
CTNND1-201ENST00000358694 PLCB2Q00722 1185 aa11.64□□□□□ -0.55
CTNND1-201ENST00000358694 PRM3Q9NNZ6 103 aa11.64□□□□□ -0.55
CTNND1-201ENST00000358694 GOLGA6L6A8MZA4 724 aa11.64□□□□□ -0.55
CTNND1-201ENST00000358694 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
CTNND1-201ENST00000358694 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-201ENST00000358694 FGD1P98174 961 aa11.63□□□□□ -0.55
CTNND1-201ENST00000358694 NAP1L2Q9ULW6 460 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-201ENST00000358694 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
CTNND1-201ENST00000358694 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
CTNND1-201ENST00000358694 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
CTNND1-201ENST00000358694 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
CTNND1-201ENST00000358694 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-201ENST00000358694 OS9Q13438 667 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-201ENST00000358694 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.55
CTNND1-201ENST00000358694 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
CTNND1-201ENST00000358694 NRDCO43847 1150 aa11.57□□□□□ -0.56
CTNND1-201ENST00000358694 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
CTNND1-201ENST00000358694 KCNJ4P48050 445 aa11.56□□□□□ -0.56
CTNND1-201ENST00000358694 ABCC9O60706 1549 aa11.53□□□□□ -0.56
CTNND1-201ENST00000358694 PNNQ9H307 717 aaKnown RBP11.52□□□□□ -0.57
CTNND1-201ENST00000358694 NAP1L5Q96NT1 182 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-201ENST00000358694 GOLGA6L4A6NEF3 574 aa11.51□□□□□ -0.57
CTNND1-201ENST00000358694 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
CTNND1-201ENST00000358694 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
CTNND1-201ENST00000358694 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
CTNND1-201ENST00000358694 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
CTNND1-201ENST00000358694 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
CTNND1-201ENST00000358694 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-201ENST00000358694 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTNND1-201ENST00000358694 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
CTNND1-201ENST00000358694 NOC3LQ8WTT2 800 aaKnown RBP11.48□□□□□ -0.57
CTNND1-201ENST00000358694 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
CTNND1-201ENST00000358694 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-201ENST00000358694 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.57
CTNND1-201ENST00000358694 RGL3Q3MIN7 710 aa11.46□□□□□ -0.57
CTNND1-201ENST00000358694 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
CTNND1-201ENST00000358694 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
CTNND1-201ENST00000358694 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
CTNND1-201ENST00000358694 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
CTNND1-201ENST00000358694 POGKQ9P215 609 aa11.45□□□□□ -0.58
CTNND1-201ENST00000358694 DRC7Q8IY82 874 aa11.45□□□□□ -0.58
CTNND1-201ENST00000358694 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
CTNND1-201ENST00000358694 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
CTNND1-201ENST00000358694 PDE4CQ08493 712 aa11.44□□□□□ -0.58
CTNND1-201ENST00000358694 HIRIP3Q9BW71 556 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-201ENST00000358694 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-201ENST00000358694 FRAT1Q92837 279 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-201ENST00000358694 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
CTNND1-201ENST00000358694 CHMP4BQ9H444 224 aaKnown RBP11.42□□□□□ -0.58
CTNND1-201ENST00000358694 RGS3P49796 1198 aa11.4□□□□□ -0.58
CTNND1-201ENST00000358694 U2SURPO15042 1029 aaKnown RBP11.39□□□□□ -0.59
CTNND1-201ENST00000358694 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
CTNND1-201ENST00000358694 SOX12O15370 315 aa11.38□□□□□ -0.59
CTNND1-201ENST00000358694 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-201ENST00000358694 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
CTNND1-201ENST00000358694 MCCP23508 829 aa11.37□□□□□ -0.59
CTNND1-201ENST00000358694 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-201ENST00000358694 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
CTNND1-201ENST00000358694 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
CTNND1-201ENST00000358694 MSNP26038 577 aaKnown RBP11.35□□□□□ -0.59
CTNND1-201ENST00000358694 MS4A1P11836 297 aa11.34□□□□□ -0.59
CTNND1-201ENST00000358694 G3V3G9 751 aa11.34□□□□□ -0.59
CTNND1-201ENST00000358694 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
CTNND1-201ENST00000358694 HSCBQ8IWL3 235 aa11.33□□□□□ -0.59
CTNND1-201ENST00000358694 PLEKHD1A6NEE1 506 aa11.33□□□□□ -0.6
CTNND1-201ENST00000358694 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
CTNND1-201ENST00000358694 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-201ENST00000358694 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
CTNND1-201ENST00000358694 CARD11Q9BXL7 1154 aa11.3□□□□□ -0.6
CTNND1-201ENST00000358694 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
CTNND1-201ENST00000358694 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
CTNND1-201ENST00000358694 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
CTNND1-201ENST00000358694 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
CTNND1-201ENST00000358694 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
CTNND1-201ENST00000358694 RASSF8Q8NHQ8 419 aa11.29□□□□□ -0.6
CTNND1-201ENST00000358694 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-201ENST00000358694 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
CTNND1-201ENST00000358694 APBB1O00213 710 aa11.28□□□□□ -0.6
CTNND1-201ENST00000358694 MLECQ14165 292 aa11.28□□□□□ -0.6
CTNND1-201ENST00000358694 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.6
CTNND1-201ENST00000358694 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
CTNND1-201ENST00000358694 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
CTNND1-201ENST00000358694 GORABQ5T7V8 394 aa11.27□□□□□ -0.61
CTNND1-201ENST00000358694 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
CTNND1-201ENST00000358694 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-201ENST00000358694 TPM4P67936 248 aa11.26□□□□□ -0.61
CTNND1-201ENST00000358694 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms