RNA–Protein interactions for RNA: ENST00000357570.9

CACNA1E-201, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 7,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-201ENST00000357570 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
CACNA1E-201ENST00000357570 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
CACNA1E-201ENST00000357570 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
CACNA1E-201ENST00000357570 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
CACNA1E-201ENST00000357570 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
CACNA1E-201ENST00000357570 ANP32BQ92688 251 aaKnown RBP14.27□□□□□ -0.13
CACNA1E-201ENST00000357570 SOX12O15370 315 aa14.26□□□□□ -0.13
CACNA1E-201ENST00000357570 HNRNPUQ00839 825 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNA1E-201ENST00000357570 POGKQ9P215 609 aa14.24□□□□□ -0.13
CACNA1E-201ENST00000357570 LAS1LQ9Y4W2 734 aaKnown RBP14.23□□□□□ -0.13
CACNA1E-201ENST00000357570 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
CACNA1E-201ENST00000357570 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.22□□□□□ -0.13
CACNA1E-201ENST00000357570 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
CACNA1E-201ENST00000357570 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
CACNA1E-201ENST00000357570 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
CACNA1E-201ENST00000357570 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
CACNA1E-201ENST00000357570 GOLGA2Q08379 1002 aa14.17□□□□□ -0.14
CACNA1E-201ENST00000357570 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
CACNA1E-201ENST00000357570 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
CACNA1E-201ENST00000357570 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
CACNA1E-201ENST00000357570 CFDP1Q9UEE9 299 aaPredicted RBP14.12□□□□□ -0.15
CACNA1E-201ENST00000357570 NEUROD2Q15784 382 aa14.11□□□□□ -0.15
CACNA1E-201ENST00000357570 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
CACNA1E-201ENST00000357570 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
CACNA1E-201ENST00000357570 CLSTN1O94985 981 aa14.1□□□□□ -0.15
CACNA1E-201ENST00000357570 FKBP8Q14318 412 aa14.1□□□□□ -0.15
CACNA1E-201ENST00000357570 MRS2Q9HD23 443 aa14.09□□□□□ -0.15
CACNA1E-201ENST00000357570 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
CACNA1E-201ENST00000357570 ZNF330Q9Y3S2 320 aaPredicted RBP14.08□□□□□ -0.16
CACNA1E-201ENST00000357570 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
CACNA1E-201ENST00000357570 CCDC136Q96JN2 1154 aa14.06□□□□□ -0.16
CACNA1E-201ENST00000357570 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
CACNA1E-201ENST00000357570 CSB-PGBD3P0DP91 1061 aa14.05□□□□□ -0.16
CACNA1E-201ENST00000357570 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
CACNA1E-201ENST00000357570 GGT6Q6P531 493 aa14.04□□□□□ -0.16
CACNA1E-201ENST00000357570 KNSTRNQ9Y448 316 aa14.03□□□□□ -0.16
CACNA1E-201ENST00000357570 STK26Q9P289 416 aa14.02□□□□□ -0.16
CACNA1E-201ENST00000357570 U2SURPO15042 1029 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-201ENST00000357570 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-201ENST00000357570 IRX6P78412 446 aaPredicted RBP14.02□□□□□ -0.16
CACNA1E-201ENST00000357570 MAPK8IP3Q9UPT6 1336 aa14.02□□□□□ -0.16
CACNA1E-201ENST00000357570 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
CACNA1E-201ENST00000357570 TMX4Q9H1E5 349 aaPredicted RBP14□□□□□ -0.17
CACNA1E-201ENST00000357570 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
CACNA1E-201ENST00000357570 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
CACNA1E-201ENST00000357570 FTSJ3Q8IY81 847 aaKnown RBP13.99□□□□□ -0.17
CACNA1E-201ENST00000357570 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
CACNA1E-201ENST00000357570 ZRSR1Q15695 479 aaKnown RBP13.98□□□□□ -0.17
CACNA1E-201ENST00000357570 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
CACNA1E-201ENST00000357570 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
CACNA1E-201ENST00000357570 FGD1P98174 961 aa13.96□□□□□ -0.17
CACNA1E-201ENST00000357570 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.18
CACNA1E-201ENST00000357570 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-201ENST00000357570 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
CACNA1E-201ENST00000357570 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
CACNA1E-201ENST00000357570 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
CACNA1E-201ENST00000357570 G3V3G9 751 aa13.94□□□□□ -0.18
CACNA1E-201ENST00000357570 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
CACNA1E-201ENST00000357570 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
CACNA1E-201ENST00000357570 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
CACNA1E-201ENST00000357570 KANK1Q14678 1352 aa13.92□□□□□ -0.18
CACNA1E-201ENST00000357570 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
CACNA1E-201ENST00000357570 MSH5O43196 834 aa13.92□□□□□ -0.18
CACNA1E-201ENST00000357570 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
CACNA1E-201ENST00000357570 KCNJ4P48050 445 aa13.92□□□□□ -0.18
CACNA1E-201ENST00000357570 NBR1Q14596 966 aa13.91□□□□□ -0.18
CACNA1E-201ENST00000357570 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
CACNA1E-201ENST00000357570 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
CACNA1E-201ENST00000357570 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
CACNA1E-201ENST00000357570 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
CACNA1E-201ENST00000357570 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
CACNA1E-201ENST00000357570 CLIP1P30622 1438 aa13.85□□□□□ -0.19
CACNA1E-201ENST00000357570 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
CACNA1E-201ENST00000357570 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
CACNA1E-201ENST00000357570 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
CACNA1E-201ENST00000357570 CYB5RLQ6IPT4 315 aa13.82□□□□□ -0.2
CACNA1E-201ENST00000357570 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
CACNA1E-201ENST00000357570 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
CACNA1E-201ENST00000357570 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
CACNA1E-201ENST00000357570 PRM3Q9NNZ6 103 aa13.8□□□□□ -0.2
CACNA1E-201ENST00000357570 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
CACNA1E-201ENST00000357570 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
CACNA1E-201ENST00000357570 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
CACNA1E-201ENST00000357570 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
CACNA1E-201ENST00000357570 EVA1CP58658 441 aa13.78□□□□□ -0.2
CACNA1E-201ENST00000357570 APBB1O00213 710 aa13.77□□□□□ -0.2
CACNA1E-201ENST00000357570 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
CACNA1E-201ENST00000357570 BECN1Q14457 450 aa13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 MORC1Q86VD1 984 aa13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 NGDNQ8NEJ9 315 aaKnown RBP13.76□□□□□ -0.21
CACNA1E-201ENST00000357570 KIF27Q86VH2 1401 aa13.75□□□□□ -0.21
CACNA1E-201ENST00000357570 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
CACNA1E-201ENST00000357570 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
CACNA1E-201ENST00000357570 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
CACNA1E-201ENST00000357570 GORABQ5T7V8 394 aa13.72□□□□□ -0.21
CACNA1E-201ENST00000357570 TMF1P82094 1093 aa13.72□□□□□ -0.21
CACNA1E-201ENST00000357570 RGS3P49796 1198 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms