RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 CLSTN1O94985 981 aa14.02□□□□□ -0.16
FXR1-202ENST00000357559 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
FXR1-202ENST00000357559 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
FXR1-202ENST00000357559 TONSLQ96HA7 1378 aa14.01□□□□□ -0.17
FXR1-202ENST00000357559 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
FXR1-202ENST00000357559 PLCB2Q00722 1185 aa14□□□□□ -0.17
FXR1-202ENST00000357559 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
FXR1-202ENST00000357559 NPHP1O15259 732 aa13.99□□□□□ -0.17
FXR1-202ENST00000357559 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
FXR1-202ENST00000357559 TNNT2P45379 298 aaPredicted RBP13.97□□□□□ -0.17
FXR1-202ENST00000357559 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
FXR1-202ENST00000357559 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
FXR1-202ENST00000357559 NAP1L5Q96NT1 182 aaPredicted RBP13.93□□□□□ -0.18
FXR1-202ENST00000357559 LAS1LQ9Y4W2 734 aaKnown RBP13.92□□□□□ -0.18
FXR1-202ENST00000357559 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
FXR1-202ENST00000357559 BECN1Q14457 450 aa13.9□□□□□ -0.18
FXR1-202ENST00000357559 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
FXR1-202ENST00000357559 GOLGA6L22H0YM25 854 aa13.88□□□□□ -0.19
FXR1-202ENST00000357559 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
FXR1-202ENST00000357559 ABCC9O60706 1549 aa13.86□□□□□ -0.19
FXR1-202ENST00000357559 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
FXR1-202ENST00000357559 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
FXR1-202ENST00000357559 PRM3Q9NNZ6 103 aa13.84□□□□□ -0.19
FXR1-202ENST00000357559 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
FXR1-202ENST00000357559 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
FXR1-202ENST00000357559 ARID3AQ99856 593 aa13.82□□□□□ -0.2
FXR1-202ENST00000357559 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
FXR1-202ENST00000357559 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
FXR1-202ENST00000357559 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
FXR1-202ENST00000357559 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
FXR1-202ENST00000357559 ERICH6BQ5W0A0 696 aa13.8□□□□□ -0.2
FXR1-202ENST00000357559 PDE4CQ08493 712 aa13.8□□□□□ -0.2
FXR1-202ENST00000357559 FGD1P98174 961 aa13.8□□□□□ -0.2
FXR1-202ENST00000357559 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
FXR1-202ENST00000357559 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
FXR1-202ENST00000357559 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.2
FXR1-202ENST00000357559 KCNJ4P48050 445 aa13.75□□□□□ -0.21
FXR1-202ENST00000357559 GOLGA6L6A8MZA4 724 aa13.74□□□□□ -0.21
FXR1-202ENST00000357559 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
FXR1-202ENST00000357559 RGL3Q3MIN7 710 aa13.73□□□□□ -0.21
FXR1-202ENST00000357559 DRC7Q8IY82 874 aa13.73□□□□□ -0.21
FXR1-202ENST00000357559 RGS3P49796 1198 aa13.73□□□□□ -0.21
FXR1-202ENST00000357559 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
FXR1-202ENST00000357559 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
FXR1-202ENST00000357559 SOX12O15370 315 aa13.7□□□□□ -0.22
FXR1-202ENST00000357559 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
FXR1-202ENST00000357559 NOC3LQ8WTT2 800 aaKnown RBP13.68□□□□□ -0.22
FXR1-202ENST00000357559 ANP32EQ9BTT0 268 aa13.67□□□□□ -0.22
FXR1-202ENST00000357559 MIER1Q8N108 512 aa13.67□□□□□ -0.22
FXR1-202ENST00000357559 RRP7BPQ9NSQ0 103 aa13.66□□□□□ -0.22
FXR1-202ENST00000357559 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
FXR1-202ENST00000357559 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
FXR1-202ENST00000357559 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
FXR1-202ENST00000357559 TSPY4P0CV99 314 aa13.63□□□□□ -0.23
FXR1-202ENST00000357559 TSPY10P0CW01 314 aa13.63□□□□□ -0.23
FXR1-202ENST00000357559 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
FXR1-202ENST00000357559 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
FXR1-202ENST00000357559 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
FXR1-202ENST00000357559 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
FXR1-202ENST00000357559 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
FXR1-202ENST00000357559 APBB1O00213 710 aa13.59□□□□□ -0.23
FXR1-202ENST00000357559 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
FXR1-202ENST00000357559 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
FXR1-202ENST00000357559 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
FXR1-202ENST00000357559 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
FXR1-202ENST00000357559 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
FXR1-202ENST00000357559 NRDCO43847 1150 aa13.58□□□□□ -0.24
FXR1-202ENST00000357559 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
FXR1-202ENST00000357559 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
FXR1-202ENST00000357559 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
FXR1-202ENST00000357559 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
FXR1-202ENST00000357559 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
FXR1-202ENST00000357559 POGKQ9P215 609 aa13.54□□□□□ -0.24
FXR1-202ENST00000357559 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.24
FXR1-202ENST00000357559 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
FXR1-202ENST00000357559 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
FXR1-202ENST00000357559 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
FXR1-202ENST00000357559 WWC1Q8IX03 1113 aa13.51□□□□□ -0.25
FXR1-202ENST00000357559 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
FXR1-202ENST00000357559 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
FXR1-202ENST00000357559 B4GALNT3Q6L9W6 998 aa13.49□□□□□ -0.25
FXR1-202ENST00000357559 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
FXR1-202ENST00000357559 SCRIBQ14160 1630 aa13.46□□□□□ -0.25
FXR1-202ENST00000357559 TNNT3P45378 269 aaPredicted RBP13.46□□□□□ -0.26
FXR1-202ENST00000357559 PATL2C9JE40 543 aaKnown RBP13.45□□□□□ -0.26
FXR1-202ENST00000357559 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
FXR1-202ENST00000357559 MLECQ14165 292 aa13.45□□□□□ -0.26
FXR1-202ENST00000357559 MCCP23508 829 aa13.45□□□□□ -0.26
FXR1-202ENST00000357559 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
FXR1-202ENST00000357559 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
FXR1-202ENST00000357559 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
FXR1-202ENST00000357559 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
FXR1-202ENST00000357559 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
FXR1-202ENST00000357559 KRI1Q8N9T8 703 aaKnown RBP13.41□□□□□ -0.26
FXR1-202ENST00000357559 NOL8Q76FK4 1167 aaKnown RBP13.4□□□□□ -0.26
FXR1-202ENST00000357559 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
FXR1-202ENST00000357559 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
FXR1-202ENST00000357559 RASSF8Q8NHQ8 419 aa13.39□□□□□ -0.27
FXR1-202ENST00000357559 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
FXR1-202ENST00000357559 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms