RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PTPRT-201ENST00000356100 ARID3CA6NKF2 412 aa7.95□□□□□ -1.14
PTPRT-201ENST00000356100 CHGAP10645 457 aaKnown RBP7.94□□□□□ -1.14
PTPRT-201ENST00000356100 MRS2Q9HD23 443 aa7.93□□□□□ -1.14
PTPRT-201ENST00000356100 CEP162Q5TB80 1403 aa7.93□□□□□ -1.14
PTPRT-201ENST00000356100 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPRT-201ENST00000356100 CASC1Q6TDU7 716 aa7.93□□□□□ -1.14
PTPRT-201ENST00000356100 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
PTPRT-201ENST00000356100 FKBP8Q14318 412 aa7.91□□□□□ -1.14
PTPRT-201ENST00000356100 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
PTPRT-201ENST00000356100 PLEKHD1A6NEE1 506 aa7.9□□□□□ -1.14
PTPRT-201ENST00000356100 NCLP19338 710 aaKnown RBP7.9□□□□□ -1.14
PTPRT-201ENST00000356100 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.15
PTPRT-201ENST00000356100 FAM9BQ8IZU0 186 aa7.9□□□□□ -1.15
PTPRT-201ENST00000356100 TNIKQ9UKE5 1360 aa7.9□□□□□ -1.15
PTPRT-201ENST00000356100 SMARCA2P51531 1590 aa7.9□□□□□ -1.15
PTPRT-201ENST00000356100 MS4A1P11836 297 aa7.89□□□□□ -1.15
PTPRT-201ENST00000356100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPRT-201ENST00000356100 KANK1Q14678 1352 aa7.87□□□□□ -1.15
PTPRT-201ENST00000356100 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
PTPRT-201ENST00000356100 KNSTRNQ9Y448 316 aa7.87□□□□□ -1.15
PTPRT-201ENST00000356100 ERCC6Q03468 1493 aa7.87□□□□□ -1.15
PTPRT-201ENST00000356100 PNNQ9H307 717 aaKnown RBP7.86□□□□□ -1.15
PTPRT-201ENST00000356100 ZRSR1Q15695 479 aaKnown RBP7.86□□□□□ -1.15
PTPRT-201ENST00000356100 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
PTPRT-201ENST00000356100 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
PTPRT-201ENST00000356100 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
PTPRT-201ENST00000356100 ARID4BQ4LE39 1312 aaPredicted RBP7.85□□□□□ -1.15
PTPRT-201ENST00000356100 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
PTPRT-201ENST00000356100 GOLGA6L6A8MZA4 724 aa7.83□□□□□ -1.16
PTPRT-201ENST00000356100 NUDCQ9Y266 331 aa7.83□□□□□ -1.16
PTPRT-201ENST00000356100 CCNB3Q8WWL7 1395 aa7.83□□□□□ -1.16
PTPRT-201ENST00000356100 CFDP1Q9UEE9 299 aaPredicted RBP7.83□□□□□ -1.16
PTPRT-201ENST00000356100 TRIM44Q96DX7 344 aaPredicted RBP7.83□□□□□ -1.16
PTPRT-201ENST00000356100 MYO15BQ96JP2 1530 aa7.83□□□□□ -1.16
PTPRT-201ENST00000356100 FTSJ3Q8IY81 847 aaKnown RBP7.83□□□□□ -1.16
PTPRT-201ENST00000356100 NRDCO43847 1150 aa7.82□□□□□ -1.16
PTPRT-201ENST00000356100 MAPK8IP3Q9UPT6 1336 aa7.82□□□□□ -1.16
PTPRT-201ENST00000356100 ARHGAP35Q9NRY4 1499 aa7.81□□□□□ -1.16
PTPRT-201ENST00000356100 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
PTPRT-201ENST00000356100 C14orf37Q86TY3 774 aa7.81□□□□□ -1.16
PTPRT-201ENST00000356100 TNNT2P45379 298 aaPredicted RBP7.81□□□□□ -1.16
PTPRT-201ENST00000356100 EIF3AQ14152 1382 aaKnown RBP7.8□□□□□ -1.16
PTPRT-201ENST00000356100 FMN1Q68DA7 1419 aa7.8□□□□□ -1.16
PTPRT-201ENST00000356100 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
PTPRT-201ENST00000356100 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
PTPRT-201ENST00000356100 CHMP4AQ9BY43 222 aa7.79□□□□□ -1.16
PTPRT-201ENST00000356100 SCAF1Q9H7N4 1312 aaKnown RBP7.78□□□□□ -1.16
PTPRT-201ENST00000356100 CARMIL2Q6F5E8 1435 aa7.78□□□□□ -1.16
PTPRT-201ENST00000356100 CARD11Q9BXL7 1154 aa7.77□□□□□ -1.17
PTPRT-201ENST00000356100 RRP7BPQ9NSQ0 103 aa7.77□□□□□ -1.17
PTPRT-201ENST00000356100 EIF4G1Q04637 1599 aaKnown RBP7.77□□□□□ -1.17
PTPRT-201ENST00000356100 ERICH6BQ5W0A0 696 aa7.76□□□□□ -1.17
PTPRT-201ENST00000356100 VPS8Q8N3P4 1428 aa7.75□□□□□ -1.17
PTPRT-201ENST00000356100 PDS5BQ9NTI5 1447 aa7.75□□□□□ -1.17
PTPRT-201ENST00000356100 PTMSP20962 102 aa7.74□□□□□ -1.17
PTPRT-201ENST00000356100 L1TD1Q5T7N2 865 aaKnown RBP7.74□□□□□ -1.17
PTPRT-201ENST00000356100 TOP2AP11388 1531 aaKnown RBP7.74□□□□□ -1.17
PTPRT-201ENST00000356100 PTMAP06454 111 aaKnown RBP7.74□□□□□ -1.17
PTPRT-201ENST00000356100 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
PTPRT-201ENST00000356100 NBR1Q14596 966 aa7.74□□□□□ -1.17
PTPRT-201ENST00000356100 TMF1P82094 1093 aa7.74□□□□□ -1.17
PTPRT-201ENST00000356100 MCCP23508 829 aa7.73□□□□□ -1.17
PTPRT-201ENST00000356100 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
PTPRT-201ENST00000356100 POGKQ9P215 609 aa7.73□□□□□ -1.17
PTPRT-201ENST00000356100 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
PTPRT-201ENST00000356100 CUX2O14529 1486 aa7.72□□□□□ -1.17
PTPRT-201ENST00000356100 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
PTPRT-201ENST00000356100 CARMIL1Q5VZK9 1371 aa7.72□□□□□ -1.17
PTPRT-201ENST00000356100 SETD5Q9C0A6 1442 aa7.71□□□□□ -1.17
PTPRT-201ENST00000356100 CCDC18Q5T9S5 1454 aa7.71□□□□□ -1.17
PTPRT-201ENST00000356100 KCNH8Q96L42 1107 aa7.71□□□□□ -1.17
PTPRT-201ENST00000356100 ROCK2O75116 1388 aaKnown RBP7.71□□□□□ -1.17
PTPRT-201ENST00000356100 CCER2I3L3R5 266 aa7.71□□□□□ -1.18
PTPRT-201ENST00000356100 PLPPR3Q6T4P5 718 aa7.71□□□□□ -1.18
PTPRT-201ENST00000356100 MIER1Q8N108 512 aa7.71□□□□□ -1.18
PTPRT-201ENST00000356100 KTN1Q86UP2 1357 aaKnown RBP7.71□□□□□ -1.18
PTPRT-201ENST00000356100 HDAC5Q9UQL6 1122 aa7.7□□□□□ -1.18
PTPRT-201ENST00000356100 A0A0G2JS52 829 aa7.7□□□□□ -1.18
PTPRT-201ENST00000356100 PHLDB1Q86UU1 1377 aa7.69□□□□□ -1.18
PTPRT-201ENST00000356100 IPO8O15397 1037 aaKnown RBP7.69□□□□□ -1.18
PTPRT-201ENST00000356100 ABCC8Q09428 1581 aa7.69□□□□□ -1.18
PTPRT-201ENST00000356100 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
PTPRT-201ENST00000356100 HSCBQ8IWL3 235 aa7.69□□□□□ -1.18
PTPRT-201ENST00000356100 FGD1P98174 961 aa7.68□□□□□ -1.18
PTPRT-201ENST00000356100 OS9Q13438 667 aaPredicted RBP7.68□□□□□ -1.18
PTPRT-201ENST00000356100 ANKRD30AQ9BXX3 1397 aa7.68□□□□□ -1.18
PTPRT-201ENST00000356100 NPHP1O15259 732 aa7.68□□□□□ -1.18
PTPRT-201ENST00000356100 RALBP1Q15311 655 aa7.68□□□□□ -1.18
PTPRT-201ENST00000356100 UACAQ9BZF9 1416 aa7.67□□□□□ -1.18
PTPRT-201ENST00000356100 DNTTIP2Q5QJE6 756 aaKnown RBP7.67□□□□□ -1.18
PTPRT-201ENST00000356100 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
PTPRT-201ENST00000356100 CCDC34Q96HJ3 373 aa7.66□□□□□ -1.18
PTPRT-201ENST00000356100 GOLGA6L4A6NEF3 574 aa7.66□□□□□ -1.18
PTPRT-201ENST00000356100 RGL3Q3MIN7 710 aa7.66□□□□□ -1.18
PTPRT-201ENST00000356100 HTATSF1O43719 755 aaKnown RBP7.66□□□□□ -1.18
PTPRT-201ENST00000356100 IRX6P78412 446 aaPredicted RBP7.66□□□□□ -1.18
PTPRT-201ENST00000356100 KCNJ4P48050 445 aa7.66□□□□□ -1.18
PTPRT-201ENST00000356100 ZBTB7CA1YPR0 619 aa7.65□□□□□ -1.18
PTPRT-201ENST00000356100 ARXQ96QS3 562 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms