RNA–Protein interactions for RNA: ENST00000356093.6

EPB41-204, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5 BASIC

Gene EPB41, Length 5,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-204ENST00000356093 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
EPB41-204ENST00000356093 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
EPB41-204ENST00000356093 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
EPB41-204ENST00000356093 MIER1Q8N108 512 aa12.54□□□□□ -0.4
EPB41-204ENST00000356093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.412e-7■■■□□ 15.9
EPB41-204ENST00000356093 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
EPB41-204ENST00000356093 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
EPB41-204ENST00000356093 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
EPB41-204ENST00000356093 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
EPB41-204ENST00000356093 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
EPB41-204ENST00000356093 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
EPB41-204ENST00000356093 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
EPB41-204ENST00000356093 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
EPB41-204ENST00000356093 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.42
EPB41-204ENST00000356093 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
EPB41-204ENST00000356093 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
EPB41-204ENST00000356093 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
EPB41-204ENST00000356093 CCNB3Q8WWL7 1395 aa12.44□□□□□ -0.42
EPB41-204ENST00000356093 VPS8Q8N3P4 1428 aa12.42□□□□□ -0.42
EPB41-204ENST00000356093 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
EPB41-204ENST00000356093 CFDP1Q9UEE9 299 aaPredicted RBP12.41□□□□□ -0.42
EPB41-204ENST00000356093 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
EPB41-204ENST00000356093 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
EPB41-204ENST00000356093 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
EPB41-204ENST00000356093 CARMIL1Q5VZK9 1371 aa12.39□□□□□ -0.43
EPB41-204ENST00000356093 CUX2O14529 1486 aa12.39□□□□□ -0.43
EPB41-204ENST00000356093 ARHGAP35Q9NRY4 1499 aa12.39□□□□□ -0.43
EPB41-204ENST00000356093 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
EPB41-204ENST00000356093 BECN1Q14457 450 aa12.37□□□□□ -0.43
EPB41-204ENST00000356093 SOGA1O94964 1423 aa12.37□□□□□ -0.43
EPB41-204ENST00000356093 ANP32EQ9BTT0 268 aa12.37□□□□□ -0.43
EPB41-204ENST00000356093 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
EPB41-204ENST00000356093 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
EPB41-204ENST00000356093 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
EPB41-204ENST00000356093 CARD11Q9BXL7 1154 aa12.34□□□□□ -0.43
EPB41-204ENST00000356093 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
EPB41-204ENST00000356093 HIRIP3Q9BW71 556 aaPredicted RBP12.34□□□□□ -0.43
EPB41-204ENST00000356093 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
EPB41-204ENST00000356093 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
EPB41-204ENST00000356093 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
EPB41-204ENST00000356093 WIZO95785 1651 aa12.3□□□□□ -0.44
EPB41-204ENST00000356093 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
EPB41-204ENST00000356093 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
EPB41-204ENST00000356093 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
EPB41-204ENST00000356093 NBR1Q14596 966 aa12.29□□□□□ -0.44
EPB41-204ENST00000356093 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
EPB41-204ENST00000356093 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
EPB41-204ENST00000356093 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
EPB41-204ENST00000356093 KANK1Q14678 1352 aa12.28□□□□□ -0.44
EPB41-204ENST00000356093 MS4A1P11836 297 aa12.27□□□□□ -0.44
EPB41-204ENST00000356093 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
EPB41-204ENST00000356093 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
EPB41-204ENST00000356093 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
EPB41-204ENST00000356093 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
EPB41-204ENST00000356093 CDK11BP21127 795 aaKnown RBP12.25□□□□□ -0.45
EPB41-204ENST00000356093 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
EPB41-204ENST00000356093 NUDCQ9Y266 331 aa12.25□□□□□ -0.45
EPB41-204ENST00000356093 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
EPB41-204ENST00000356093 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
EPB41-204ENST00000356093 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
EPB41-204ENST00000356093 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
EPB41-204ENST00000356093 SUPT16HQ9Y5B9 1047 aaKnown RBP12.24□□□□□ -0.45
EPB41-204ENST00000356093 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
EPB41-204ENST00000356093 TMF1P82094 1093 aa12.23□□□□□ -0.45
EPB41-204ENST00000356093 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
EPB41-204ENST00000356093 MAPK8IP3Q9UPT6 1336 aa12.22□□□□□ -0.45
EPB41-204ENST00000356093 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
EPB41-204ENST00000356093 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.46
EPB41-204ENST00000356093 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
EPB41-204ENST00000356093 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
EPB41-204ENST00000356093 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
EPB41-204ENST00000356093 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
EPB41-204ENST00000356093 ARID4BQ4LE39 1312 aaPredicted RBP12.16□□□□□ -0.46
EPB41-204ENST00000356093 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
EPB41-204ENST00000356093 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
EPB41-204ENST00000356093 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
EPB41-204ENST00000356093 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
EPB41-204ENST00000356093 HSPA5P11021 654 aaKnown RBP12.14□□□□□ -0.47
EPB41-204ENST00000356093 POGKQ9P215 609 aa12.14□□□□□ -0.47
EPB41-204ENST00000356093 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
EPB41-204ENST00000356093 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
EPB41-204ENST00000356093 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
EPB41-204ENST00000356093 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
EPB41-204ENST00000356093 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
EPB41-204ENST00000356093 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
EPB41-204ENST00000356093 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
EPB41-204ENST00000356093 RALBP1Q15311 655 aa12.12□□□□□ -0.47
EPB41-204ENST00000356093 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
EPB41-204ENST00000356093 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
EPB41-204ENST00000356093 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
EPB41-204ENST00000356093 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
EPB41-204ENST00000356093 ROCK2O75116 1388 aaKnown RBP12.11□□□□□ -0.47
EPB41-204ENST00000356093 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
EPB41-204ENST00000356093 PKD2Q13563 968 aa12.08□□□□□ -0.48
EPB41-204ENST00000356093 ARXQ96QS3 562 aa12.08□□□□□ -0.48
EPB41-204ENST00000356093 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
EPB41-204ENST00000356093 EFCAB2Q5VUJ9 269 aa12.05□□□□□ -0.48
EPB41-204ENST00000356093 MORC1Q86VD1 984 aa12.05□□□□□ -0.48
EPB41-204ENST00000356093 FRAT1Q92837 279 aaPredicted RBP12.05□□□□□ -0.48
EPB41-204ENST00000356093 LAS1LQ9Y4W2 734 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms