RNA–Protein interactions for RNA: ENST00000355272.10

AP3D1-202, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3D1, Length 5,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-202ENST00000355272 TMC1Q8TDI8 760 aa22.68■■□□□ 1.22
AP3D1-202ENST00000355272 MRS2Q9HD23 443 aa22.66■■□□□ 1.22
AP3D1-202ENST00000355272 RGL3Q3MIN7 710 aa22.64■■□□□ 1.21
AP3D1-202ENST00000355272 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
AP3D1-202ENST00000355272 EEA1Q15075 1411 aa22.63■■□□□ 1.21
AP3D1-202ENST00000355272 PLEKHD1A6NEE1 506 aa22.6■■□□□ 1.21
AP3D1-202ENST00000355272 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
AP3D1-202ENST00000355272 NBR1Q14596 966 aa22.59■■□□□ 1.21
AP3D1-202ENST00000355272 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
AP3D1-202ENST00000355272 SOGA1O94964 1423 aa22.57■■□□□ 1.2
AP3D1-202ENST00000355272 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
AP3D1-202ENST00000355272 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
AP3D1-202ENST00000355272 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
AP3D1-202ENST00000355272 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
AP3D1-202ENST00000355272 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
AP3D1-202ENST00000355272 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
AP3D1-202ENST00000355272 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
AP3D1-202ENST00000355272 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
AP3D1-202ENST00000355272 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.185e-6■■□□□ 12.1
AP3D1-202ENST00000355272 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
AP3D1-202ENST00000355272 CUX2O14529 1486 aa22.35■■□□□ 1.17
AP3D1-202ENST00000355272 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
AP3D1-202ENST00000355272 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
AP3D1-202ENST00000355272 ANP32EQ9BTT0 268 aa22.33■■□□□ 1.17
AP3D1-202ENST00000355272 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
AP3D1-202ENST00000355272 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
AP3D1-202ENST00000355272 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
AP3D1-202ENST00000355272 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
AP3D1-202ENST00000355272 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
AP3D1-202ENST00000355272 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
AP3D1-202ENST00000355272 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
AP3D1-202ENST00000355272 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
AP3D1-202ENST00000355272 ZBTB7CA1YPR0 619 aa22.23■■□□□ 1.15
AP3D1-202ENST00000355272 ARXQ96QS3 562 aa22.23■■□□□ 1.15
AP3D1-202ENST00000355272 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
AP3D1-202ENST00000355272 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
AP3D1-202ENST00000355272 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
AP3D1-202ENST00000355272 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.14
AP3D1-202ENST00000355272 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
AP3D1-202ENST00000355272 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
AP3D1-202ENST00000355272 FOXD1Q16676 465 aa22.18■■□□□ 1.14
AP3D1-202ENST00000355272 UPF2Q9HAU5 1272 aaKnown RBP22.18■■□□□ 1.14
AP3D1-202ENST00000355272 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
AP3D1-202ENST00000355272 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.13
AP3D1-202ENST00000355272 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
AP3D1-202ENST00000355272 A0A0G2JS52 829 aa22.13■■□□□ 1.13
AP3D1-202ENST00000355272 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
AP3D1-202ENST00000355272 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
AP3D1-202ENST00000355272 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
AP3D1-202ENST00000355272 CC2D1BQ5T0F9 858 aaKnown RBP22.07■■□□□ 1.12
AP3D1-202ENST00000355272 ANP32BQ92688 251 aaKnown RBP22.06■■□□□ 1.12
AP3D1-202ENST00000355272 WIZO95785 1651 aa22.04■■□□□ 1.12
AP3D1-202ENST00000355272 MLECQ14165 292 aa22.03■■□□□ 1.12
AP3D1-202ENST00000355272 CDCA8Q53HL2 280 aa21.98■■□□□ 1.11
AP3D1-202ENST00000355272 POGKQ9P215 609 aa21.98■■□□□ 1.11
AP3D1-202ENST00000355272 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
AP3D1-202ENST00000355272 PKD2Q13563 968 aa21.97■■□□□ 1.11
AP3D1-202ENST00000355272 CFAP53Q96M91 514 aa21.96■■□□□ 1.11
AP3D1-202ENST00000355272 GGT6Q6P531 493 aa21.95■■□□□ 1.1
AP3D1-202ENST00000355272 LAS1LQ9Y4W2 734 aaKnown RBP21.95■■□□□ 1.1
AP3D1-202ENST00000355272 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
AP3D1-202ENST00000355272 B4GALNT3Q6L9W6 998 aa21.94■■□□□ 1.1
AP3D1-202ENST00000355272 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
AP3D1-202ENST00000355272 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
AP3D1-202ENST00000355272 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
AP3D1-202ENST00000355272 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
AP3D1-202ENST00000355272 MYH16Q9H6N6 1097 aa21.91■■□□□ 1.1
AP3D1-202ENST00000355272 RAB3GAP2Q9H2M9 1393 aa21.91■■□□□ 1.1
AP3D1-202ENST00000355272 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
AP3D1-202ENST00000355272 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
AP3D1-202ENST00000355272 RBM19Q9Y4C8 960 aaKnown RBP21.89■■□□□ 1.1
AP3D1-202ENST00000355272 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
AP3D1-202ENST00000355272 GLIPR1L2Q4G1C9 344 aa21.89■■□□□ 1.09
AP3D1-202ENST00000355272 FRAT1Q92837 279 aaPredicted RBP21.88■■□□□ 1.09
AP3D1-202ENST00000355272 U2SURPO15042 1029 aaKnown RBP21.88■■□□□ 1.09
AP3D1-202ENST00000355272 SOX12O15370 315 aa21.88■■□□□ 1.09
AP3D1-202ENST00000355272 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
AP3D1-202ENST00000355272 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
AP3D1-202ENST00000355272 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
AP3D1-202ENST00000355272 MPHOSPH9Q99550 1183 aa21.85■■□□□ 1.09
AP3D1-202ENST00000355272 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
AP3D1-202ENST00000355272 RGS3P49796 1198 aa21.83■■□□□ 1.09
AP3D1-202ENST00000355272 TMF1P82094 1093 aa21.83■■□□□ 1.09
AP3D1-202ENST00000355272 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
AP3D1-202ENST00000355272 DDRGK1Q96HY6 314 aa21.83■■□□□ 1.08
AP3D1-202ENST00000355272 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
AP3D1-202ENST00000355272 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
AP3D1-202ENST00000355272 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
AP3D1-202ENST00000355272 STK26Q9P289 416 aa21.82■■□□□ 1.08
AP3D1-202ENST00000355272 FTSJ3Q8IY81 847 aaKnown RBP21.81■■□□□ 1.08
AP3D1-202ENST00000355272 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
AP3D1-202ENST00000355272 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.083e-7■■■■■ 48.9
AP3D1-202ENST00000355272 NUP155O75694 1391 aa21.79■■□□□ 1.08
AP3D1-202ENST00000355272 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
AP3D1-202ENST00000355272 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
AP3D1-202ENST00000355272 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
AP3D1-202ENST00000355272 NUDCQ9Y266 331 aa21.77■■□□□ 1.08
AP3D1-202ENST00000355272 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.07
AP3D1-202ENST00000355272 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
AP3D1-202ENST00000355272 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms