RNA–Protein interactions for RNA: ENST00000354744.8

SEMA6D-202, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-202ENST00000354744 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
SEMA6D-202ENST00000354744 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
SEMA6D-202ENST00000354744 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
SEMA6D-202ENST00000354744 C14orf37Q86TY3 774 aa16.6■□□□□ 0.25
SEMA6D-202ENST00000354744 DNTTIP2Q5QJE6 756 aaKnown RBP16.59■□□□□ 0.25
SEMA6D-202ENST00000354744 CFAP53Q96M91 514 aa16.58■□□□□ 0.25
SEMA6D-202ENST00000354744 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
SEMA6D-202ENST00000354744 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
SEMA6D-202ENST00000354744 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
SEMA6D-202ENST00000354744 CHIC2Q9UKJ5 165 aa16.54■□□□□ 0.24
SEMA6D-202ENST00000354744 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
SEMA6D-202ENST00000354744 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
SEMA6D-202ENST00000354744 NRDCO43847 1150 aa16.51■□□□□ 0.23
SEMA6D-202ENST00000354744 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
SEMA6D-202ENST00000354744 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
SEMA6D-202ENST00000354744 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEMA6D-202ENST00000354744 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
SEMA6D-202ENST00000354744 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
SEMA6D-202ENST00000354744 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
SEMA6D-202ENST00000354744 L1TD1Q5T7N2 865 aaKnown RBP16.44■□□□□ 0.22
SEMA6D-202ENST00000354744 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
SEMA6D-202ENST00000354744 NAP1L5Q96NT1 182 aaPredicted RBP16.43■□□□□ 0.22
SEMA6D-202ENST00000354744 NPHP1O15259 732 aa16.41■□□□□ 0.22
SEMA6D-202ENST00000354744 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
SEMA6D-202ENST00000354744 MS4A1P11836 297 aa16.41■□□□□ 0.22
SEMA6D-202ENST00000354744 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
SEMA6D-202ENST00000354744 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
SEMA6D-202ENST00000354744 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
SEMA6D-202ENST00000354744 KNSTRNQ9Y448 316 aa16.4■□□□□ 0.22
SEMA6D-202ENST00000354744 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
SEMA6D-202ENST00000354744 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
SEMA6D-202ENST00000354744 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
SEMA6D-202ENST00000354744 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
SEMA6D-202ENST00000354744 FGD1P98174 961 aa16.37■□□□□ 0.21
SEMA6D-202ENST00000354744 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
SEMA6D-202ENST00000354744 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
SEMA6D-202ENST00000354744 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
SEMA6D-202ENST00000354744 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
SEMA6D-202ENST00000354744 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
SEMA6D-202ENST00000354744 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
SEMA6D-202ENST00000354744 LAS1LQ9Y4W2 734 aaKnown RBP16.33■□□□□ 0.2
SEMA6D-202ENST00000354744 GOLGA6L4A6NEF3 574 aa16.32■□□□□ 0.2
SEMA6D-202ENST00000354744 KCNJ4P48050 445 aa16.32■□□□□ 0.2
SEMA6D-202ENST00000354744 CLSTN1O94985 981 aa16.31■□□□□ 0.2
SEMA6D-202ENST00000354744 MCCP23508 829 aa16.31■□□□□ 0.2
SEMA6D-202ENST00000354744 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
SEMA6D-202ENST00000354744 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
SEMA6D-202ENST00000354744 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
SEMA6D-202ENST00000354744 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
SEMA6D-202ENST00000354744 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
SEMA6D-202ENST00000354744 MIER1Q8N108 512 aa16.26■□□□□ 0.19
SEMA6D-202ENST00000354744 MSNP26038 577 aaKnown RBP16.26■□□□□ 0.19
SEMA6D-202ENST00000354744 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
SEMA6D-202ENST00000354744 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
SEMA6D-202ENST00000354744 PTMSP20962 102 aa16.25■□□□□ 0.19
SEMA6D-202ENST00000354744 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
SEMA6D-202ENST00000354744 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
SEMA6D-202ENST00000354744 POGKQ9P215 609 aa16.24■□□□□ 0.19
SEMA6D-202ENST00000354744 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
SEMA6D-202ENST00000354744 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
SEMA6D-202ENST00000354744 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
SEMA6D-202ENST00000354744 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
SEMA6D-202ENST00000354744 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
SEMA6D-202ENST00000354744 GNL2Q13823 731 aaKnown RBP16.2■□□□□ 0.18
SEMA6D-202ENST00000354744 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
SEMA6D-202ENST00000354744 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
SEMA6D-202ENST00000354744 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
SEMA6D-202ENST00000354744 CLIP1P30622 1438 aa16.18■□□□□ 0.18
SEMA6D-202ENST00000354744 RGS3P49796 1198 aa16.18■□□□□ 0.18
SEMA6D-202ENST00000354744 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
SEMA6D-202ENST00000354744 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
SEMA6D-202ENST00000354744 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
SEMA6D-202ENST00000354744 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
SEMA6D-202ENST00000354744 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
SEMA6D-202ENST00000354744 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
SEMA6D-202ENST00000354744 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
SEMA6D-202ENST00000354744 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
SEMA6D-202ENST00000354744 TPM4P67936 248 aa16.13■□□□□ 0.17
SEMA6D-202ENST00000354744 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
SEMA6D-202ENST00000354744 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
SEMA6D-202ENST00000354744 CFDP1Q9UEE9 299 aaPredicted RBP16.1■□□□□ 0.17
SEMA6D-202ENST00000354744 KANK1Q14678 1352 aa16.09■□□□□ 0.17
SEMA6D-202ENST00000354744 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
SEMA6D-202ENST00000354744 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
SEMA6D-202ENST00000354744 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
SEMA6D-202ENST00000354744 TMF1P82094 1093 aa16.07■□□□□ 0.16
SEMA6D-202ENST00000354744 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
SEMA6D-202ENST00000354744 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 PRM3Q9NNZ6 103 aa16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 EEA1Q15075 1411 aa16.06■□□□□ 0.16
SEMA6D-202ENST00000354744 GOLGA6L1Q8N7Z2 621 aa16.05■□□□□ 0.16
SEMA6D-202ENST00000354744 CCDC34Q96HJ3 373 aa16.05■□□□□ 0.16
SEMA6D-202ENST00000354744 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
SEMA6D-202ENST00000354744 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
SEMA6D-202ENST00000354744 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
SEMA6D-202ENST00000354744 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms