RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 IRX6P78412 446 aaPredicted RBP10.56□□□□□ -0.72
SCN8A-201ENST00000354534 CLSTN1O94985 981 aa10.56□□□□□ -0.72
SCN8A-201ENST00000354534 NOC3LQ8WTT2 800 aaKnown RBP10.56□□□□□ -0.72
SCN8A-201ENST00000354534 NRDCO43847 1150 aa10.56□□□□□ -0.72
SCN8A-201ENST00000354534 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
SCN8A-201ENST00000354534 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
SCN8A-201ENST00000354534 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
SCN8A-201ENST00000354534 DRC7Q8IY82 874 aa10.54□□□□□ -0.72
SCN8A-201ENST00000354534 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.72
SCN8A-201ENST00000354534 FBLN2P98095 1184 aa10.52□□□□□ -0.73
SCN8A-201ENST00000354534 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.73
SCN8A-201ENST00000354534 SENP3Q9H4L4 574 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-201ENST00000354534 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
SCN8A-201ENST00000354534 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
SCN8A-201ENST00000354534 TMC1Q8TDI8 760 aa10.5□□□□□ -0.73
SCN8A-201ENST00000354534 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-201ENST00000354534 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
SCN8A-201ENST00000354534 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCN8A-201ENST00000354534 PNNQ9H307 717 aaKnown RBP10.49□□□□□ -0.73
SCN8A-201ENST00000354534 SETQ01105 290 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-201ENST00000354534 KIAA2012Q0VF49 1180 aa10.48□□□□□ -0.73
SCN8A-201ENST00000354534 PPM1GO15355 546 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-201ENST00000354534 GOLGA6L1Q8N7Z2 621 aa10.47□□□□□ -0.73
SCN8A-201ENST00000354534 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
SCN8A-201ENST00000354534 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
SCN8A-201ENST00000354534 NAP1L2Q9ULW6 460 aaPredicted RBP10.45□□□□□ -0.74
SCN8A-201ENST00000354534 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
SCN8A-201ENST00000354534 PDE4CQ08493 712 aa10.42□□□□□ -0.74
SCN8A-201ENST00000354534 PTMSP20962 102 aa10.42□□□□□ -0.74
SCN8A-201ENST00000354534 DDX10Q13206 875 aaKnown RBP10.42□□□□□ -0.74
SCN8A-201ENST00000354534 PATL2C9JE40 543 aaKnown RBP10.42□□□□□ -0.74
SCN8A-201ENST00000354534 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
SCN8A-201ENST00000354534 GOLGA6L4A6NEF3 574 aa10.41□□□□□ -0.74
SCN8A-201ENST00000354534 FGD1P98174 961 aa10.41□□□□□ -0.74
SCN8A-201ENST00000354534 DEKP35659 375 aaKnown RBP10.4□□□□□ -0.75
SCN8A-201ENST00000354534 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
SCN8A-201ENST00000354534 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
SCN8A-201ENST00000354534 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
SCN8A-201ENST00000354534 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
SCN8A-201ENST00000354534 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
SCN8A-201ENST00000354534 TAF7LQ5H9L4 462 aa10.37□□□□□ -0.75
SCN8A-201ENST00000354534 APPP05067 770 aa10.36□□□□□ -0.75
SCN8A-201ENST00000354534 KCNJ4P48050 445 aa10.34□□□□□ -0.75
SCN8A-201ENST00000354534 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
SCN8A-201ENST00000354534 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
SCN8A-201ENST00000354534 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
SCN8A-201ENST00000354534 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
SCN8A-201ENST00000354534 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
SCN8A-201ENST00000354534 HSP90AA2PQ14568 343 aaPredicted RBP10.32□□□□□ -0.76
SCN8A-201ENST00000354534 NPHP1O15259 732 aa10.31□□□□□ -0.76
SCN8A-201ENST00000354534 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
SCN8A-201ENST00000354534 GNL2Q13823 731 aaKnown RBP10.3□□□□□ -0.76
SCN8A-201ENST00000354534 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
SCN8A-201ENST00000354534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
SCN8A-201ENST00000354534 HSCBQ8IWL3 235 aa10.29□□□□□ -0.76
SCN8A-201ENST00000354534 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
SCN8A-201ENST00000354534 GZF1Q9H116 711 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-201ENST00000354534 ISY1Q9ULR0 285 aaKnown RBP10.28□□□□□ -0.76
SCN8A-201ENST00000354534 RGS3P49796 1198 aa10.28□□□□□ -0.76
SCN8A-201ENST00000354534 ZNF771Q7L3S4 317 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-201ENST00000354534 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
SCN8A-201ENST00000354534 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-201ENST00000354534 HAP1P54257 671 aaPredicted RBP10.26□□□□□ -0.77
SCN8A-201ENST00000354534 DCAF1Q9Y4B6 1507 aa10.24□□□□□ -0.77
SCN8A-201ENST00000354534 CEP89Q96ST8 783 aa10.24□□□□□ -0.77
SCN8A-201ENST00000354534 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-201ENST00000354534 TPM4P67936 248 aa10.24□□□□□ -0.77
SCN8A-201ENST00000354534 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
SCN8A-201ENST00000354534 CREBRFQ8IUR6 639 aa10.23□□□□□ -0.77
SCN8A-201ENST00000354534 MCCP23508 829 aa10.2□□□□□ -0.78
SCN8A-201ENST00000354534 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
SCN8A-201ENST00000354534 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
SCN8A-201ENST00000354534 CCAR2Q8N163 923 aaKnown RBP10.18□□□□□ -0.78
SCN8A-201ENST00000354534 MAP7D2Q96T17 732 aa10.18□□□□□ -0.78
SCN8A-201ENST00000354534 STK11IPQ8N1F8 1099 aa10.18□□□□□ -0.78
SCN8A-201ENST00000354534 TPM3P06753 285 aa10.18□□□□□ -0.78
SCN8A-201ENST00000354534 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
SCN8A-201ENST00000354534 SYAP1Q96A49 352 aaPredicted RBP10.17□□□□□ -0.78
SCN8A-201ENST00000354534 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
SCN8A-201ENST00000354534 FRAT1Q92837 279 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-201ENST00000354534 GBP4Q96PP9 640 aa10.16□□□□□ -0.78
SCN8A-201ENST00000354534 GPS2Q13227 327 aa10.16□□□□□ -0.78
SCN8A-201ENST00000354534 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
SCN8A-201ENST00000354534 MIER1Q8N108 512 aa10.16□□□□□ -0.78
SCN8A-201ENST00000354534 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 TEX35Q5T0J7 233 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 GOLGA6L3A6NEY3 463 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 NOM1Q5C9Z4 860 aaKnown RBP10.14□□□□□ -0.79
SCN8A-201ENST00000354534 CHIC2Q9UKJ5 165 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 HTATSF1O43719 755 aaKnown RBP10.14□□□□□ -0.79
SCN8A-201ENST00000354534 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
SCN8A-201ENST00000354534 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
SCN8A-201ENST00000354534 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
SCN8A-201ENST00000354534 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
SCN8A-201ENST00000354534 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
SCN8A-201ENST00000354534 CHMP4BQ9H444 224 aaKnown RBP10.12□□□□□ -0.79
SCN8A-201ENST00000354534 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
SCN8A-201ENST00000354534 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
SCN8A-201ENST00000354534 PPP4R2Q9NY27 417 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms