RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0.01
SLC6A20-201ENST00000353278 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
SLC6A20-201ENST00000353278 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
SLC6A20-201ENST00000353278 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
SLC6A20-201ENST00000353278 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
SLC6A20-201ENST00000353278 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ 0
SLC6A20-201ENST00000353278 HSP90AA1P07900 732 aaKnown RBP15.04■□□□□ -0
SLC6A20-201ENST00000353278 RGL3Q3MIN7 710 aa15.04■□□□□ -0
SLC6A20-201ENST00000353278 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
SLC6A20-201ENST00000353278 ANP32AP39687 249 aaKnown RBP15.02□□□□□ -0.01
SLC6A20-201ENST00000353278 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
SLC6A20-201ENST00000353278 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
SLC6A20-201ENST00000353278 CDCA8Q53HL2 280 aa15□□□□□ -0.01
SLC6A20-201ENST00000353278 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
SLC6A20-201ENST00000353278 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
SLC6A20-201ENST00000353278 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
SLC6A20-201ENST00000353278 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
SLC6A20-201ENST00000353278 POGKQ9P215 609 aa14.95□□□□□ -0.02
SLC6A20-201ENST00000353278 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
SLC6A20-201ENST00000353278 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
SLC6A20-201ENST00000353278 MLECQ14165 292 aa14.92□□□□□ -0.02
SLC6A20-201ENST00000353278 ARXQ96QS3 562 aa14.91□□□□□ -0.02
SLC6A20-201ENST00000353278 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
SLC6A20-201ENST00000353278 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
SLC6A20-201ENST00000353278 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
SLC6A20-201ENST00000353278 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
SLC6A20-201ENST00000353278 KNSTRNQ9Y448 316 aa14.89□□□□□ -0.03
SLC6A20-201ENST00000353278 KANK1Q14678 1352 aa14.88□□□□□ -0.03
SLC6A20-201ENST00000353278 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
SLC6A20-201ENST00000353278 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
SLC6A20-201ENST00000353278 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
SLC6A20-201ENST00000353278 CARD11Q9BXL7 1154 aa14.85□□□□□ -0.03
SLC6A20-201ENST00000353278 FKBP8Q14318 412 aa14.85□□□□□ -0.03
SLC6A20-201ENST00000353278 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
SLC6A20-201ENST00000353278 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
SLC6A20-201ENST00000353278 CUX2O14529 1486 aa14.84□□□□□ -0.03
SLC6A20-201ENST00000353278 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
SLC6A20-201ENST00000353278 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
SLC6A20-201ENST00000353278 NUDCQ9Y266 331 aa14.83□□□□□ -0.04
SLC6A20-201ENST00000353278 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
SLC6A20-201ENST00000353278 NPHP1O15259 732 aa14.82□□□□□ -0.04
SLC6A20-201ENST00000353278 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
SLC6A20-201ENST00000353278 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
SLC6A20-201ENST00000353278 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
SLC6A20-201ENST00000353278 GGT6Q6P531 493 aa14.78□□□□□ -0.04
SLC6A20-201ENST00000353278 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
SLC6A20-201ENST00000353278 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
SLC6A20-201ENST00000353278 CDK11BP21127 795 aaKnown RBP14.72□□□□□ -0.05
SLC6A20-201ENST00000353278 SMARCA2P51531 1590 aa14.71□□□□□ -0.06
SLC6A20-201ENST00000353278 SOGA1O94964 1423 aa14.7□□□□□ -0.06
SLC6A20-201ENST00000353278 SRPK2P78362 688 aaKnown RBP14.7□□□□□ -0.06
SLC6A20-201ENST00000353278 LAS1LQ9Y4W2 734 aaKnown RBP14.7□□□□□ -0.06
SLC6A20-201ENST00000353278 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
SLC6A20-201ENST00000353278 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
SLC6A20-201ENST00000353278 NEUROD2Q15784 382 aa14.69□□□□□ -0.06
SLC6A20-201ENST00000353278 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
SLC6A20-201ENST00000353278 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
SLC6A20-201ENST00000353278 TMF1P82094 1093 aa14.67□□□□□ -0.06
SLC6A20-201ENST00000353278 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
SLC6A20-201ENST00000353278 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
SLC6A20-201ENST00000353278 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
SLC6A20-201ENST00000353278 SOX12O15370 315 aa14.65□□□□□ -0.06
SLC6A20-201ENST00000353278 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
SLC6A20-201ENST00000353278 CHMP4BQ9H444 224 aaKnown RBP14.63□□□□□ -0.07
SLC6A20-201ENST00000353278 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
SLC6A20-201ENST00000353278 CASC1Q6TDU7 716 aa14.62□□□□□ -0.07
SLC6A20-201ENST00000353278 STK26Q9P289 416 aa14.61□□□□□ -0.07
SLC6A20-201ENST00000353278 EID1Q9Y6B2 187 aa14.6□□□□□ -0.07
SLC6A20-201ENST00000353278 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
SLC6A20-201ENST00000353278 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
SLC6A20-201ENST00000353278 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
SLC6A20-201ENST00000353278 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
SLC6A20-201ENST00000353278 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 SIN3AQ96ST3 1273 aa14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 MS4A1P11836 297 aa14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 CC2D1BQ5T0F9 858 aaKnown RBP14.58□□□□□ -0.08
SLC6A20-201ENST00000353278 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
SLC6A20-201ENST00000353278 KIF3BO15066 747 aa14.57□□□□□ -0.08
SLC6A20-201ENST00000353278 PKD2Q13563 968 aa14.57□□□□□ -0.08
SLC6A20-201ENST00000353278 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
SLC6A20-201ENST00000353278 MIER1Q8N108 512 aa14.57□□□□□ -0.08
SLC6A20-201ENST00000353278 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
SLC6A20-201ENST00000353278 BECN1Q14457 450 aa14.55□□□□□ -0.08
SLC6A20-201ENST00000353278 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
SLC6A20-201ENST00000353278 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
SLC6A20-201ENST00000353278 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
SLC6A20-201ENST00000353278 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
SLC6A20-201ENST00000353278 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
SLC6A20-201ENST00000353278 SPAG9O60271 1321 aaKnown RBP14.53□□□□□ -0.08
SLC6A20-201ENST00000353278 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
SLC6A20-201ENST00000353278 ANKRD30AQ9BXX3 1397 aa14.53□□□□□ -0.08
SLC6A20-201ENST00000353278 OSCARQ8IYS5 282 aa14.52□□□□□ -0.08
SLC6A20-201ENST00000353278 FRAT1Q92837 279 aaPredicted RBP14.52□□□□□ -0.08
SLC6A20-201ENST00000353278 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
SLC6A20-201ENST00000353278 ZRSR1Q15695 479 aaKnown RBP14.52□□□□□ -0.09
SLC6A20-201ENST00000353278 CYB5RLQ6IPT4 315 aa14.52□□□□□ -0.09
SLC6A20-201ENST00000353278 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.09
SLC6A20-201ENST00000353278 TIMELESSQ9UNS1 1208 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms